Id Converters Test
Id Converters Test
A list of 100 Ensembl Human Gene IDs was extracted from a supplementary file of a published paper (PMID:17302974). These 100
Ensembl IDs were used as input and the lists of respective HGNC symbols were retrieved from each of the five in silico tools. Genes in
green correspond to those retrieved by all five tools.
http://view.ncbi.nlm.nih.gov/pubmed/17302974
http://www.pubmedcentral.nih.gov/picrender.fcgi?artid=1810323&blobname=1471-2105-8-55-S6.xls
100
91 89
90
78
80
70
61
60 57
50
40
32
30
20
10
0
1 2 3 4 5 6
1: Babelomics ID-Converter
2: ID Converter System
3: DAVID Gene ID Conversion Tool
4: g:Profiler Gene ID Converter
5: Clone/Gene ID Converter
6: Retrieved by all five tools
Babelomics ID-Converter g:Profiler Gene ID Converter Clone/Gene ID Converter DAVID Gene ID Conversion Tool MatchMiner
200724_at RPL10 200724_at RPL10 200724_at DNASE1L1 200724_at RPL10 200724_at RPL10
201495_x_at MYH11 201495_x_at MYH11 201495_x_at 201495_x_at MYH11 201495_x_at MYH11
202493_x_at CSH2 202493_x_at 202493_x_at CSH2 202493_x_at GH1 202493_x_at GH2
202755_s_at 202755_s_at GPC1 202755_s_at 202755_s_at GPC1 202755_s_at GPC1
204217_s_at RTN2 204217_s_at 204217_s_at RTN2 204217_s_at RTN2 204217_s_at RTN2
204450_x_at APOA1 204450_x_at APOA1 204450_x_at 204450_x_at APOA1 204450_x_at APOA1
204737_s_at MYH7 204737_s_at MYH7 204737_s_at MYH7 204737_s_at MYH7 204737_s_at MYH7
204989_s_at ITGB4 204989_s_at 204989_s_at ITGB4 204989_s_at ITGB4 204989_s_at ITGB4
205195_at AP1S1 205195_at 205195_at AP1S1 205195_at AP1S1 205195_at AP1S1
205574_x_at BMP1 205574_x_at BMP1 205574_x_at 205574_x_at BMP1 205574_x_at BMP1
205753_at CRP 205753_at CRP 205753_at CRP 205753_at CRP 205753_at CRP
205900_at KRT1 205900_at 205900_at KRT1 205900_at KRT1 205900_at KRT1
205958_x_at CSH2 205958_x_at 205958_x_at CSH2 205958_x_at CSHL1 205958_x_at CSHL1
206087_x_at CSHL1 206087_x_at 206087_x_at HFE 206087_x_at HFE 206087_x_at HFE
206168_at HFE 206168_at ZC3H7B 206168_at 206168_at ZC3H7B 206168_at ZC3H7B
206261_at ZNF239 206261_at ZNF239 206261_at ZNF239 206261_at ZNF239 206261_at ZNF239
206329_at EXTL1 206329_at EXTL1 206329_at EXTL1 206329_at EXTL1 206329_at EXTL1
206442_at SEMG1 206442_at SEMG1 206442_at SEMG1 206442_at SEMG1 206442_at SEMG1
206628_at SLC5A1 206628_at SLC5A1 206628_at SLC5A1 206628_at SLC5A1 206628_at SLC5A1
206639_x_at HTN1 206639_x_at HTN1 206639_x_at 206639_x_at HTN1 206639_x_at HTN1
206742_at FIGF 206742_at FIGF 206742_at FIGF 206742_at FIGF 206742_at FIGF
206775_at CUBN 206775_at CUBN 206775_at CUBN 206775_at CUBN 206775_at CUBN
206831_s_at ARSD 206831_s_at ARSD 206831_s_at ARSD 206831_s_at ARSD 206831_s_at ARSD
206858_s_at HOXC6 206858_s_at 206858_s_at 206858_s_at HOXC6 206858_s_at HOXC4
206859_s_at PAEP 206859_s_at PAEP 206859_s_at PAEP 206859_s_at PAEP 206859_s_at PAEP
206997_s_at HS6ST1 206997_s_at HS6ST1 206997_s_at HS6ST1 206997_s_at HS6ST1 206997_s_at HS6ST1
207020_at HSF2BP 207020_at HSF2BP 207020_at HSF2BP 207020_at HSF2BP 207020_at HSF2BP
207028_at MYCNOS 207028_at 207028_at 207028_at MYCNOS 207028_at MYCNOS
207139_at ATP4A 207139_at ATP4A 207139_at ATP4A 207139_at ATP4A 207139_at ATP4A
207188_at CDK3 207188_at 207188_at 207188_at CDK3 207188_at CDK3
207347_at PGBD3 207347_at ERCC6 207347_at PGBD3 207347_at PGBD3 207347_at ERCC6
207600_at KCNC3 207600_at KCNC3 207600_at KCNC3 207600_at KCNC3 207600_at KCNC3
207665_at ADAM21 207665_at 207665_at ADAM21 207665_at ADAM21 207665_at ADAM21P
207824_s_at MAZ 207824_s_at 207824_s_at MAZ 207824_s_at MAZ 207824_s_at MAZ
207967_at 207967_at VPS45 207967_at 207967_at VPS45 207967_at VPS45
208038_at IL1RL2 208038_at IL1RL2 208038_at IL1RL2 208038_at IL1RL2 208038_at IL1RL2
208226_x_at ADAM22 208226_x_at 208226_x_at ADAM22 208226_x_at ADAM22 208226_x_at ADAM22
208243_s_at CNR1 208243_s_at CNR1 208243_s_at 208243_s_at CNR1 208243_s_at CNR1
208314_at RRH 208314_at RRH 208314_at RRH 208314_at RRH 208314_at RRH
208359_s_at KCNJ4 208359_s_at KCNJ4 208359_s_at KCNJ4 208359_s_at KCNJ4 208359_s_at KCNJ4
208379_x_at 208379_x_at 208379_x_at 208379_x_at NPY2R 208379_x_at NPY2R
208391_s_at GLP1R 208391_s_at GLP1R 208391_s_at GLP1R 208391_s_at GLP1R 208391_s_at GLP1R
208408_at 208408_at 208408_at 208408_at PTN 208408_at PTN
209742_s_at MYL2 209742_s_at 209742_s_at 209742_s_at MYL2 209742_s_at MYL2
209789_at CORO2B 209789_at CORO2B 209789_at 209789_at CORO2B 209789_at CORO2B
209904_at TNNC1 209904_at 209904_at 209904_at TNNC1 209904_at TNNC1
209951_s_at 209951_s_at MAP2K7 209951_s_at MAP2K7 209951_s_at MAP2K7 209951_s_at MAP2K7
210333_at NR5A1 210333_at NR5A1 210333_at NR5A1 210333_at NR5A1 210333_at NR5A1
210393_at LGR5 210393_at 210393_at 210393_at LGR5 210393_at LGR5
210581_x_at PATZ1 210581_x_at PATZ1 210581_x_at PATZ1 210581_x_at PATZ1 210581_x_at PATZ1
210701_at 210701_at CFDP1 210701_at 210701_at CFDP1 210701_at CFDP1
211473_s_at COL4A6 211473_s_at COL4A6 211473_s_at COL4A6 211473_s_at COL4A6 211473_s_at COL4A6
211620_x_at RUNX1 211620_x_at RUNX1 211620_x_at RUNX1 211620_x_at RUNX1 211620_x_at RUNX1
211687_x_at KIR2DL1 211687_x_at KIR2DL1 211687_x_at KIR2DL1 211687_x_at KIR2DL1 211687_x_at KIR2DL1
211708_s_at SCD 211708_s_at SCD 211708_s_at LOC645313 211708_s_at SCD 211708_s_at SCD
211739_x_at CSH2 211739_x_at 211739_x_at CSH2 211739_x_at GH1 211739_x_at GH2
211958_at IGFBP5 211958_at IGFBP5 211958_at 211958_at IGFBP5 211958_at IGFBP5
212992_at C14orf78 212992_at 212992_at AHNAK2 212992_at AHNAK2 212992_at AHNAK2
213231_at DMWD 213231_at 213231_at DMWD 213231_at DMWD 213231_at DMWD
213449_at POP1 213449_at 213449_at 213449_at POP1 213449_at POP1
213884_s_at TRIM3 213884_s_at TRIM3 213884_s_at 213884_s_at TRIM3 213884_s_at TRIM3
214158_s_at PRDM10 214158_s_at FABP1 214158_s_at PRDM10 214158_s_at PRDM10 214158_s_at PRDM10
214406_s_at SLC7A4 214406_s_at SLC7A4 214406_s_at SLC7A4 214406_s_at SLC7A4 214406_s_at SLC7A4
214421_x_at CYP2C9 214421_x_at CYP2C9 214421_x_at CYP2C19 214421_x_at CYP2C9 214421_x_at CYP2C9
215012_at 215012_at 215012_at 215012_at ZNF451 215012_at KIAA1586
215403_at 215403_at 215403_at 215403_at TRIO 215403_at TRIO
215651_at 215651_at 215651_at 215651_at SNF1LK2 215651_at
215692_s_at MPPED2 215692_s_at 215692_s_at MPPED2 215692_s_at MPPED2 215692_s_at MPPED2
215828_at 215828_at 215828_at 215828_at ZFHX3 215828_at ATBF1
216284_at 216284_at 216284_at 216284_at CDC14B 216284_at
216721_at 216721_at 216721_at 216721_at SLC25A30 216721_at SLC25A30
216934_at CLTB 216934_at CLTB 216934_at 216934_at 216934_at CLTB
217082_at 217082_at 217082_at 217082_at 217082_at
217293_at 217293_at 217293_at 217293_at 217293_at
217367_s_at ZHX3 217367_s_at ZHX3 217367_s_at ZHX3 217367_s_at ZHX3 217367_s_at ZHX3
217447_at 217447_at 217447_at 217447_at MAG 217447_at MAG
217567_at 217567_at TGM4 217567_at 217567_at TGM4 217567_at TGM4
218685_s_at SMUG1 218685_s_at 218685_s_at 218685_s_at SMUG1 218685_s_at SMUG1
219153_s_at 219153_s_at 219153_s_at THSD4 219153_s_at THSD4 219153_s_at THSD4
219249_s_at FKBP10 219249_s_at FKBP10 219249_s_at 219249_s_at FKBP10 219249_s_at FKBP10
219531_at CEP72 219531_at 219531_at CEP72 219531_at CEP72 219531_at CEP72
219685_at TMEM35 219685_at TMEM35 219685_at TMEM35 219685_at TMEM35 219685_at TMEM35
219769_at INCENP 219769_at 219769_at INCENP 219769_at INCENP 219769_at INCENP
219926_at POPDC3 219926_at POPDC3 219926_at POPDC3 219926_at POPDC3 219926_at POPDC3
220125_at DNAI1 220125_at DNAI1 220125_at DNAI1 220125_at DNAI1 220125_at DNAI1
220366_at ELSPBP1 220366_at 220366_at ELSPBP1 220366_at ELSPBP1 220366_at ELSPBP1
220505_at C9orf53 220505_at 220505_at 220505_at C9ORF53 220505_at CDKN2A
220535_at FAM90A1 220535_at FAM90A23 220535_at 220535_at FAM90A1 220535_at FAM90A1
220555_s_at PDZD7 220555_s_at 220555_s_at PDZD7 220555_s_at PDZD7 220555_s_at PDZD7
220645_at FAM55D 220645_at 220645_at FAM55D 220645_at FAM55D 220645_at FAM55D
220694_at 220694_at 220694_at 220694_at DDEF1IT1 220694_at DDEF1IT1
221113_s_at WNT16 221113_s_at 221113_s_at WNT16 221113_s_at WNT16 221113_s_at WNT16
221116_at 221116_at 221116_at 221116_at 221116_at
221917_s_at 221917_s_at 221917_s_at GRSF1 221917_s_at GRSF1 221917_s_at GRSF1
221948_s_at 221948_s_at KLHL22 221948_s_at 221948_s_at KLHL22 221948_s_at KLHL22
222025_s_at OPLAH 222025_s_at 222025_s_at OPLAH 222025_s_at OPLAH 222025_s_at OPLAH
222167_at 222167_at 222167_at 222167_at PVRL3 222167_at PVRL3
222371_at 222371_at 222371_at 222371_at PIAS1 222371_at PIAS1
40273_at SPHK2 40273_at 40273_at 40273_at SPHK2 40273_at DBP
91816_f_at RKHD1 91816_f_at MEX3D 91816_f_at 91816_f_at MEX3D 91816_f_at RKHD1
A list of 100 Affymetrix IDs was extracted from a supplementary file of a published paper (PMID:16638148). These 100 Affymetrix IDs
related to human genes were used as input and the lists of respective HGNC symbols were retrieved from each of the five in silico tools.
Genes in green correspond to those retrieved by all five tools.
http://view.ncbi.nlm.nih.gov/pubmed/16638148
http://www.pubmedcentral.nih.gov/picrender.fcgi?artid=1553448&blobname=1471-2164-7-92-S4.xls
100 96 95
90
80 77
70
60 57
52
50
40
28
30
20
10
0
1 2 3 4 5 6
Diego Forero, MD
Editor, hum-molgen.org
http://hum-molgen.org/