PGI 2012 Installation Guide

Version 12.10

The Portland Group

While every precaution has been taken in the preparation of this document, The Portland Group (PGI) makes no warranty for the use of its products and assumes no responsibility for any errors that may appear, or for damages resulting from the use of the information contained herein. The Portland Group retains the right to make changes to this information at any time, without notice. The software described in this document is distributed under license from The Portland Group and/or its licensors and may be used or copied only in accordance with the terms of the end-user license agreement ("EULA"). PGI Workstation, PGI Server, PGI Accelerator, PGF95, PGF90, PGFORTRAN, PGI Unified Binary, and PGCL are trademarks; and PGI, PGHPF, PGF77, PGCC, PGC++, PGI Visual Fortran, PVF, PGI CDK, Cluster Development Kit, PGPROF, PGDBG, and The Portland Group are registered trademarks of The Portland Group Incorporated. Other brands and names are property of their respective owners. No part of this document may be reproduced or transmitted in any form or by any means, for any purpose other than the purchaser's or the end user's personal use without the express written permission of The Portland Group, Inc.

PGI 2012 Installation Guide

Copyright 2012 The Portland Group, Inc. and STMicroelectronics, Inc. All rights reserved. Printed in the United States of America First Printing: Release 2012, version 12.1, January 2012 Second Printing: Release 2012, version 12.2, February 2012 Third Printing: Release 2012, version 12.3, March 2012 Fourth Printing: Release 2012, version 12.4, April 2012 Fifth Printing: Release 2012, version 12.5, May 2012 Sixth Printing: Release 2012, version 12.6, June 2012 Seventh Printing: Release 2012, version 12.8, August 2012 Eighth Printing: Release 2012, version 12.9, September 2012 Ninth Printing: Release 2012, version 12.10, October 2012

Technical support: [email protected] Sales: [email protected] Web: www.pgroup.com

ID: 122821247

Contents
1. Release 2012 Introduction .............................................................................................. 1
Product Overview .................................................................................................................... 1 PGI Workstation and PGI Server Comparison ...................................................................... 1 PGI CDK Cluster Development Kit ...................................................................................... 1 Release Components ............................................................................................................... 2 Terms and Definitions ............................................................................................................. 3 Supported Processors .............................................................................................................. 3 Supported Operating Systems .................................................................................................. 5 Product Support ..................................................................................................................... 7

2. PGI 2012 Installation Overview ...................................................................................... 9

Before You Begin .................................................................................................................... 9 PGI Server Network Installations ............................................................................................. 10 PGI Installations on Linux - gcc Compiler Requirements ............................................................. 10 gcc Compiler Availability ................................................................................................ 11 PGI CDK Installation Overview ................................................................................................. 11 Cluster Configurations .................................................................................................... 12 Open Source Component Overview .................................................................................. 13

3. Licensing ............................................................................................................................ 15
Licensing Terminology ........................................................................................................... License Keys ......................................................................................................................... License Key Options ...................................................................................................... License Key Capabilities ................................................................................................. License Key Comparisons ............................................................................................... License Key Dependencies .............................................................................................. PGI License Setup Tool .......................................................................................................... PGI Workstation Licensing ...................................................................................................... PGI Server Licensing .............................................................................................................. PGI CDK Licensing ................................................................................................................ The FlexNet License Manager .................................................................................................. License Support .................................................................................................................... 15 15 15 16 16 16 16 16 16 17 17 17 iii

4. PGI Installations on Linux ............................................................................................. 19

Prepare to Install PGI Workstation or PGI Server on Linux .......................................................... Preparing to Install PGI CDK on Linux ..................................................................................... Installation Steps for Linux ..................................................................................................... Typical Directory Structure for Linux ....................................................................................... End-user Environment Settings ................................................................................................ PGI Workstation and PGI Server ...................................................................................... PGI CDK ...................................................................................................................... Common Linux Installation Issues ........................................................................................... Java Runtime Environment (JRE) .................................................................................... 19 22 24 33 34 34 35 37 37

5. Installations on Apple Mac OS X .................................................................................. 39

Preparing to Install on MacOS ................................................................................................ Installation Steps for MacOS ................................................................................................... Typical Directory Structure for MacOS ..................................................................................... End-user Environment Settings on MacOS ................................................................................. 39 40 46 46

6. Installations on Microsoft Windows ............................................................................ 49

Preparing to Install on Windows ............................................................................................. 49 Installation Steps for Windows ................................................................................................ 49 Customizing the Command Window ......................................................................................... 54 PGI Workstation Directory Structure ........................................................................................ 54 Default Installation Directories ........................................................................................ 54 PGI Workstation Directories on a 64-bit Windows System .................................................... 55 PGI Workstation Directories on a 32-bit Windows System ................................................... 55 LM_LICENSE_FILE and FLEXLM_BATCH ................................................................................... 56 LM_LICENSE_FILE ......................................................................................................... 56 FLEXLM_BATCH ............................................................................................................ 57 Windows Firewall and PGI Debugging ...................................................................................... 57 Automatic Additions to Windows Firewall Exceptions List .................................................... 57 Common Windows Installation Problems .................................................................................. 58

7. Contact Information ........................................................................................................ 59

iv

Figures
4.1. Linux Installation Overview ...................................................................................................... 20 4.2. PGI CDK Linux Installation Overview .......................................................................................... 23 5.1. MacOS Installation Overview .................................................................................................... 41

Tables
1.1. Processors Supported by PGI 2012 ............................................................................................. 4 1.2. Operating Systems and Features Supported in PGI 2012 ................................................................. 5 3.1. License Key Comparisons ......................................................................................................... 16 4.1. Baseline PGI Installation Linux Directory Structure ...................................................................... 33 4.2. PGI Server Linux Directory Structure Additions ........................................................................... 34 5.1. MacOS Directory Structure ....................................................................................................... 46 6.1. Default Windows Installation Directories by Platform ................................................................... 54 6.2. 64-bit Windows Directory Structure .......................................................................................... 55 6.3. 32-bit Windows Directory Structure .......................................................................................... 56

vi

Chapter 1. Release 2012 Introduction

Welcome to Release 2012 of PGI Workstation, PGI Server, and PGI CDK Cluster Development Kit, a set of compilers and development tools for 32-bit and 64-bit x86-compatible processor-based workstations, servers, and clusters running versions of the Linux and Microsoft Windows operating systems. PGI Workstation and PGI Server are also available on Apple Mac OS X operating systems. This installation information applies to all PGI products from The Portland Group.

Product Overview
The PGI Workstation, PGI Server, and the PGI CDK include exactly the same compilers and tool software. The difference is the manner in which the license enables the software.

PGI Workstation and PGI Server Comparison

All PGI Workstation products include a node-locked single-user license, meaning one user at a time can compile on the one system on which the PGI Workstation compilers and tools are installed. The product and license server are on the same local machine. PGI Server products are offered in configurations identical to PGI Workstation, but include networkfloating multi-user licenses. This means that two or more users can use the PGI compilers and tools concurrently on any compatible system networked to the license server, that is, the system on which the PGI Server license keys are installed. There can be multiple installations of the PGI Server compilers and tools on machines connected to the license server; and the users can use the product concurrently, provided they are issued a license key by the license server.

PGI CDK Cluster Development Kit

A cluster is a collection of compatible computers connected by a network. The PGI CDK supports parallel computation on clusters of 32-bit and 64-bit x86-compatible AMD and Intel processor-based Linux and Windows workstations or servers interconnected by a TCP/IP-based network, such as Ethernet. 1

Release Components

Support for cluster programming does not extend to clusters combining 64-bit processor-based systems with 32-bit processor-based systems, unless all are running 32-bit applications built for a common set of working x86 instructions.

Note
Compilers and libraries can be installed on other platforms not in the users cluster, including another cluster, as long as all platforms use a common floating license server. The PGI CDK supports 64-bit x64 (AMD64, Intel 64) processor-based systems, with large array addressing in PGF77, PGF95, PGFORTRAN, PGC++, and PGCC. These systems can utilize a 64-bit address space while retaining the ability to run legacy 32-bit x86 executables at full speed.

Release Components
Release 2012 includes the following components: PGFORTRANTM native OpenMP and auto-parallelizing Fortran 2003 compiler. PGCC native OpenMP and auto-parallelizing ANSI C99 and K&R C compiler. PGC++ native OpenMP and auto-parallelizing ANSI C++ compiler. PGPROF MPI, OpenMP, and multi-thread graphical profiler. PGDBG MPI, OpenMP, and multi-thread graphical debugger. MPICH MPI libraries, version 1.2.7, for both 32-bit and 64-bit development environments (Linux only).

Note
64-bit linux86-64 MPI messages are limited to <2GB size each. Precompiled OpenMPI library for both 32-bit and 64-bit MacOS development environments. A UNIX-like shell environment for 32-bit and 64-bit Windows platforms. FlexNet license utilities. Documentation in PDF and man page formats.

Additional components for PGI CDK

The PGI CDK for Linux also includes these components: MPICH2 MPI libraries, version 1.0.5p3, for both 32-bit and 64-bit development environments. MVAPICH MPI libraries, version 1.1, for both 32-bit and 64-bit development environments. ScaLAPACK linear algebra math library for distributed-memory systems, including BLACS version 1.1- the Basic Linear Algebra Communication Subroutines) and ScaLAPACK version 1.7 for use with MPICH or MPICH2 and the PGI compilers on Linux systems with a kernel revision of 2.4.20 or higher. This is provided in both linux86 and linux86-64 versions for AMD64 or Intel 64 CPU-based installations. 2

Chapter 1. Release 2012 Introduction

Note
linux86-64 versions are limited. Depending on the product configuration you purchased, you may not have licensed all of the above components.

MPI Support
You can use PGI products to develop, debug, and profile MPI applications. The MPI profiler and debugger included with PGI Workstation are limited to eight local processes. The MPI profiler and debugger included with PGI Server are limited to 16 local processes. The MPI profiler and debugger included with PGI CDK supports up to 256 remote processes.

Terms and Definitions

These release notes contain a number of terms and definitions with which you may or may not be familiar. If you encounter an unfamiliar term in these notes, please refer to the online glossary at www.pgroup.com/support/definitions.htm These two terms are used throughout the documentation to reflect groups of processors: AMD64 a 64-bit processor from AMD designed to be binary compatible with 32-bit x86 processors, and incorporating new features such as additional registers and 64-bit addressing support for improved performance and greatly increased memory range. This term includes the AMD Athlon64, AMD Opteron, AMD Turion, AMD Barcelona, AMD Shanghai, and AMD Istanbul processors. Intel 64 a 64-bit IA32 processor with Extended Memory 64-bit Technology extensions designed to be binary compatible with AMD64 processors. This includes Intel Pentium 4, Intel Xeon, Intel Core, Intel Core 2 (Penryn), Intel Core i3, i5, i7 (Nehalem) processors.

Supported Processors
Table 1.1 lists the processors on which Release 2012 of the PGI compilers and tools is supported. The table also includes the CPUs available and supported in multi-core versions. The tp <target> command-line option generates executables that utilize features and optimizations specific to a given CPU and operating system environment. Compilers included in a 64-bit/32-bit PGI installation can produce executables targeted to any 64-bit or 32-bit target, including cross-targeting for AMD64 and Intel 64-bit compatible CPUs. PGI products have the capability to generate binaries optimized for specific AMD or Intel processors. The PGI 2012 compilers can produce PGI Unified Binary object or executable files containing code streams fully optimized and supported for both AMD and Intel x64 CPUs and NVIDIA GPUs.

Tip
To determine what CPU you have, use one of the following commands: 3

Supported Processors

pgf90 V

or
pgcc V

To produce PGI Unified Binary files, use one of the following tp command-line options, where <target> is any of the valid values in Table 1.1.
tp x64

or
tp <target1>,<target2>,<target3>

Table 1.1. Processors Supported by PGI 2012 Brand CPU | Micro-Architecture Target Processor tp <target> [,target...] 32-bit AMD Opteron Bulldozer Opteron Six-core Istanbul Opteron Quad-core Shanghai Opteron Quad-core Barcelona Opteron Quad-core Opteron Rev E?F Turion / Turion 64 Athlon64 Athlon Athlon XP/MP Intel Sandybridge Nehalem Penryn Core P4/Xeon EM64T Xeon Pentium4 Pentium III Pentium II Generic Generic x86 p5 or px-32 NA sandybridge-32 nehalem-32 penryn-32 core2-32 p7-32 p7-32 piii p6 sandybridge-64 nehalem-64 penryn-64 core2-64 p7-64 NA NA NA bulldozer-32 istanbul-32 shanghai-32 barcelona-32 k8-32 k8-32 k8-32 NA athlon athlonxp bulldozer-64 istanbul-64 shanghai-64 barcelona-64 k8-64 k8-64e k8-64e k8-64e NA NA 64-bit

The compilers do work on x86 CPUs not listed in the table. 4

Chapter 1. Release 2012 Introduction

Supported Operating Systems

Table 1.2 lists the operating systems, and their equivalents, on which PGI 2012 compilers and tools are supported. To determine if Release 2012 will install and run under a Linux equivalent version, such as Mandrake, Debian, CentOS, and so on, check the table for a supported system with the same glibc and gcc versions. Version differences in other operating system components can cause difficulties, but often these can be overcome with minor adjustments to the PGI software installation or operating system environment. Linux operating systems with support for x64 compatible processors are designated 64-bit in the table. These are the only distributions on which the 64-bit versions of the PGI compilers and tools will fully install. If you attempt to install the 64-bit/32-bit Linux version on a system running a 32-bit Linux distribution, only the 32-bit PGI compilers and tools are installed. If you attempt to install the 64-bit Windows version on a system running 32-bit Windows, the installation fails. Most modern operating systems include support for Intel Hyper-threading (HT). Most modern Linux distributions support the Native Posix Threads Library (NPTL). Distributions that include NPTL are designated in the table. Parallel executables generated using the OpenMP and auto-parallelization features of the PGI compilers will automatically make use of NPTL on distributions where it is available. In addition, the PGDBG debugger is capable of debugging executables built using either NPTL or earlier pthread implementations. Many modern multi-socket AMD Opteron processor-based servers use a NUMA (Non-Uniform Memory Access) architecture in which the memory latency from a given processor to a given portion of memory can vary. Newer Linux distributions, including SuSE 9/10 and SLES 9/10, include NUMA libraries that can be leveraged by a compiler and associated runtime libraries to optimize placement of data in memory. In the table headings: HT = hyper-threading NPTL = Native POSIX Threads Library NUMA = Non-Uniform Memory Access Table 1.2. Operating Systems and Features Supported in PGI 2012 Type Linux Distribution RHEL 6.2 RHEL 6.1 RHEL 6.0 RHEL 5.6 RHEL 5.5 RHEL 5.4 RHEL 5.3 RHEL 5.0 RHEL 4.0 64-bit HT Yes Yes Yes Yes Yes Yes Yes Yes Yes Yes Yes Yes Yes Yes Yes Yes Yes Yes NPTL NUMA glibc Yes Yes Yes Yes Yes Yes Yes Yes Yes Yes Yes Yes Yes No No No No No 2.12 2.12 2.12 2.12 2.5 2.5 2.5 2.5 2.3.4 GCC 4.4.6 4.4.5 4.4.4 4.4.4 4.1.2 4.1.2 4.1.2 4.1.2 3.4.3 5

Supported Operating Systems

Type Linux

Distribution Fedora 14 Fedora 13 Fedora 12 Fedora 11 Fedora 10 Fedora 9 Fedora 8 Fedora 7 Fedora 6 Fedora 5 Fedora 4 SuSE 11.3 SuSE 11.2 SuSE 11.1 SuSE 11.0 SuSE 10.3 SuSE 10.2 SuSE 10.1 SuSE 10.0 SuSE 9.3 SLES 11 SLES 10 SLES 9 RedHat 9.0 Ubuntu 11.10 Ubuntu 11.04 Ubuntu 10.10 Ubuntu 10.04 Ubuntu 9.10 Ubuntu 9.04 Ubuntu 8.10 Ubuntu 8.04

64-bit HT Yes Yes Yes Yes Yes Yes Yes Yes Yes Yes Yes Yes Yes Yes Yes Yes Yes Yes Yes Yes Yes Yes Yes No Yes Yes Yes Yes Yes Yes Yes Yes Yes Yes Yes Yes Yes Yes Yes Yes Yes Yes Yes Yes Yes Yes Yes Yes Yes Yes Yes Yes Yes Yes Yes No Yes Yes Yes Yes Yes Yes Yes Yes

NPTL NUMA glibc Yes Yes Yes Yes Yes Yes Yes Yes Yes Yes Yes Yes Yes Yes Yes Yes Yes Yes Yes Yes Yes Yes No Yes Yes Yes Yes Yes Yes Yes Yes Yes Yes Yes Yes Yes Yes Yes Yes Yes Yes Yes No Yes Yes Yes Yes Yes Yes Yes Yes Yes Yes Yes Yes No Yes Yes Yes Yes Yes Yes Yes Yes 2.12 2.12 2.11 2.9 2.9 2.8 2.7 2.6 2.5 2.4 2.3.5 2.11.2 2.10.1 2.9 2.8 2.6.1 2.5 2.4 2.3.5 2.3.4 2.9 2.4 2.3.3 2.3.2 2.13.0 2.12.1 2.11.1 2.10.1 2.9 2.8 2.7

GCC 4.4.5 4.4.4 4.4.2 4.3.3 4.3.2 4.3.0 4.1.2 4.1.2 4.1.1 4.1.0 4.0.0 4.5 4.4.1 4.3.3 4.3.1 4.2.1 4.1.0 4.1.0 4.0.2 3.3.5 4.3.3 4.1.0 3.3.3 3.2.2 4.5.2 4.4.5 4.4.3 4.4.1 4.3.3 4.3.2 4.2.1

2.13.20 4.6.1

Chapter 1. Release 2012 Introduction

Type Microsoft Windows

Distribution XP XP x64 2003 2003 x64 2008 2008 x64 Vista Vista x64 Windows 7 HPC Server 2008

64-bit HT No Yes No Yes No Yes No Yes Yes Yes Yes Yes Yes Yes No Yes Yes Yes Yes Yes Yes Yes No No

NPTL NUMA glibc NA NA NA NA NA NA NA NA NA NA NA NA Yes Yes Yes Yes Yes Yes Yes Yes Yes Yes NA NA NA NA NA NA NA NA NA NA NA NA NA NA

GCC NA NA NA NA NA NA NA NA NA NA 4.2.1 4.0.1

Apple

Lion Snow Leopard

Note
www.pgroup.com/support/install.htm lists any new operating system distributions that may be explicitly supported by the PGI compilers. If your operating system is newer than any of those listed in Table 1.2, the installation may still be successful.

Linux
Java Runtime Environment (JRE) The PGI debugger and profiler use Java SE 6. On 64-bit systems PGDBG and PGPROF use a 64-bit JRE; on 32bit systems they use a 32-bit JRE. The correct JRE is important because PGDBG and PGPROF make calls to native code, which must be of compatible "bitness" to function properly.

Windows
PGI 2012 for Windows supports most of the features of the 32-bit and 64-bit versions for linux86 and linux86-64 environments.

Mac OS X
PGI 2012 for Mac OS X supports most of the features of the 32-bit and 64-bit versions for linux86 and linux86-64 environments. Except where noted in PGI documentation, the PGI compilers and tools on Mac OS X function identically to their Linux counterparts.

Product Support
All new PGI licenses include 60 days of PGI Subscription Service. The PGI Subscription Service provides the following benefits: 7

Product Support

Ongoing technical support. Support requests may be sent in a number of ways: By electronic mail to [email protected] Faxed to +1-503-682-2637 By using the online support request form available at www.pgroup.com/support/support_request.php Phone support is not currently available. Notification by e-mail when maintenance releases occur and are available for electronic download and installation. Release upgrades for licensed Product(s) at no additional cost, except for any administrative fee that may apply. Full license fee credits on Product upgrades, except for any administrative fee that may apply. "Product upgrades" refer to exchanging one Product license for a more expensive Product license, and is not the same as a version or Release upgrade previously referenced. Full license fee credits on user-count upgrades, except for any administrative fee that may apply.

Important
To continue receiving these benefits after 60 days, you can purchase an extension to your PGI Subscription Service. Extensions are available in yearly increments. Contact [email protected] if you would like information regarding the subscription service for the PGI products you have purchased.

Chapter 2. PGI 2012 Installation Overview

This chapter provides an overview of the steps required to successfully install PGI Workstation, PGI Server, or the PGI CDK. The remaining chapters provide the details of each of the steps. Specifically, Licensing describes licensing. Chapter 4, PGI Installations on Linux describes how to install PGI Workstation, PGI Server or PGI CDK in a generic manner on Linux, including how to install and run a FlexNet license daemon on Linux. Chapter 6, Installations on Microsoft Windows describes how to install on a Windows system, and Chapter 5, Installations on Apple Mac OS X describes how to install on an Apple Mac OS X system.

Before You Begin

Before you begin the installation, it is advantageous to understand the flow of the installation process. There are three stages of the process: Prepare to install verifying that you have all the required information and software. Install the software installing the software appropriate for your operating system License the Software generating of license keys using the PGI website, installation of the license keys, and starting the license server. The following illustration provides a high-level overview of the PGI installation process.

PGI Server Network Installations

For more complete information on these steps and the specific actions to take for your operating system, refer to the corresponding chapters in this guide.

PGI Server Network Installations

Linux
On Linux, PGI Server may be installed locally on each machine on a network or it may be installed once on a shared file system available to each machine. If you select the second method, then after the first installation you can run a simple script on each machine in the group to add each new platform to the family of machines using the common compiler installation. For more information on network installations, refer to Chapter 4, PGI Installations on Linux.

MacOS and Windows

On MacOS and Windows, PGI Server must be installed locally on each machine. A network installation using a shared file system is not supported.

PGI Installations on Linux - gcc Compiler Requirements

On Linux systems, PGI compilers need the gcc tool chain (ld,as,ar) and gcc libraries and header files to be compatible with your version of Linux. Therefore, to successfully install the PGI compilers on a Linux system, the system must already have gcc compilers installed. To successfully install 64-bit PGI compilers, gcc 64-bit compilers must be present and in the user's path. 10

Chapter 2. PGI 2012 Installation Overview

To successfully install 32-bit PGI compilers, gcc 32-bit compilers must be present and in the user's path.

Note
32-bit Linux systems can only have 32-bit gcc compilers. To successfully install 32-bit PGI compilers on a 64-bit Linux system, gcc 32-bit compilers must be present and in the user's path.

gcc Compiler Availability

To determine if 32-bit or 64-bit gcc compilers are installed on the system, do the following: 1. Create a hello.c program.
#include <stdio.h> int main() { printf(" hello\n"); }

2. Execute the appropriate commands to determine if you have gcc support in your path: For 64-bit gcc support:
% gcc -m64 -o ./hello_64 ./hello.c ! create a 64-bit executable % file ./hello_64 ! does the file exist, and is it 64-bit?

hello_64: ELF 64-bit LSB executable, AMD x86-64, version 1 (SYSV), for GNU/Linux 2.6.9, dynamically linked (uses shared libs), for GNU/Linux 2.6.9, not stripped

For 32-bit gcc support:

% gcc -m32 -o ./hello_32 ./hello.c ! create a 32-bit executable % file ./hello_32 ! does the file exist, and is it 32-bit?

hello_32: ELF 32-bit LSB executable, Intel 80386, version 1 (SYSV), for GNU/Linux 2.6.9, dynamically linked (uses shared libs), for GNU/Linux 2.6.9, not stripped

PGI CDK Installation Overview

The following sections contain the information needed for you to successfully prepare to install the PGI CDK software. As stated earlier, a cluster is a collection of compatible computers connected by a network. The PGI CDK software is installed on a working cluster. It is not the purpose of this product to create a cluster, or to troubleshoot one. The PGI CDK release can be installed on a single node, and the node can be treated as if it is a cluster. Support for cluster programming does not extend to clusters combining AMD64 or Intel 64 CPU-based systems with IA32 CPU-based systems, unless all are running 32-bit applications built for a common set of working x86 instructions. 11

PGI CDK Installation Overview

For multi-process programming of message-passing applications that execute on a cluster, the PGI CDK includes both a 32-bit and a 64-bit set of MPICH and MPICH2 libraries. These libraries include versions that can collect additional information useful in the cluster debugger PGDBG and the cluster profiler PGPROF, and they implement the MPI inter-process communication standard. Once you have downloaded the PGI CDK from www.pgroup.com, you can view the documentation by loading the file index.htm from the directory in which you unpacked the PGI tar file. After installation, the file index.htm is available in the top-level PGI installation directory.

Cluster Configurations
Clusters are typically configured with two types of nodes: A "master" node from which jobs are launched "slave" nodes that are used only for computation The PGI CDK is always installed by users on the master node, and the compilers and tools are installed to run from the master node only. Typically, the master node is accessible from the general-purpose or "public" network and shares a file system with the other computers on your network using NFS. The master node and all of the slave nodes are interconnected using a second "private" network that is only accessible from computers that are part of the cluster. There are two common cluster configurations: 1. The master node is used only for compilation and job submission, and only the slave nodes are used for computation. 2. All nodes are used for computation, including the master node. One way to use MPICH in the first configuration is to manage job scheduling. By default, the mpirun command uses the master node as one of the computation nodes. It is possible to exclude the master node as a computation node in the second configuration if mpirun is invoked with the -nolocal option. For more information, refer to the man page for mpirun. If you are using the first configuration, it is possible to install MPICH and run parallel MPI or HPF jobs without installing any of the other components. However, if you have multiple users running jobs on your cluster simultaneously, you should determine how to ensure your cluster nodes are allocated and used efficiently. Typically, a master node has two network cards to allow communication to the outside network as well as to the cluster nodes themselves, which may be on their own subnet. If this is the case on your cluster, then when the installation script prompts you for the name of the master node, you should use the name associated with the network card connected to the same network as the cluster nodes. For MPICH to run correctly, access from each node to every other node must be available via the rsh or ssh command. For example, if a 3-node cluster consists of a master, named master, and two slaves named node1 and node2, then from node1 as a user you should be able to issue the commands:
% rsh master date % rsh node2 date

12

Chapter 2. PGI 2012 Installation Overview

or
% ssh master date % ssh node2 date

You can issue similar commands from node2 using master and node1. By default, all of the PGI compilers and tools will be installed on your system. You will select which of the open source components to install. At this point, before you start the installation, you must determine: Which PGI CDK open source components MPICH, MPICH2, and MVAPICH you will install. The hostnames of all the nodes that will be included in your cluster. You need a list of these during the installation. The type of cluster configuration that is, whether the master node will participate as a compute node or will be strictly a front-end for compilation, job launching, and so on. Whether the compute nodes can share files with the master node, which is strongly recommended. Chapter 4, PGI Installations on Linux describes how to install the PGI Fortran, C and C++ compilers and tools on Linux using the installcdk script from PGI.

Note
Some, but not all, parts of the PGI CDK require root access to successfully execute the installcdk script. For multi-system cluster installations, you need root access. Without root access you can create a compilers, tools, and MPICH library installation on a single local system that allows multi-process/multi-threaded development. Chapter 4, PGI Installations on Linux also includes the steps for configuring and starting the FlexNet license daemon that is required to make the PGI software operational. The FlexNet license daemon enables use of the PGI compilers and tools by any user on any system networked to the system on which the PGI software is installed. For example, users can compile, debug, and profile using the PGI CDK compilers and tools on any system on your general-purpose network, subject to the constraints on concurrent usage for the product you have purchased. The PGI compilers and tools are license-managed, which is described in the next chapter. Further, the Installation Steps for Linux, on page 24 provides specific information about how to use your personalized account to generate trial or permanent license keys.

Open Source Component Overview

The PGI Compiler Users Guide describes basic usage of the open source components of the PGI CDK, including MPICH, ScaLAPACK libraries, and the example benchmark programs and tutorials. MPICH, MPICH2, MVAPICH, and ScaLAPACK are all open source software packages that are not formally supported by The Portland Group. All source code for these components is included in the cdk subdirectory. Along with the source code, each of these components has end-user and implementer documentation, generally in the form of printable PostScript. Support for these products is generally provided by their respective user communities, which you can learn more about at the following URLs: 13

PGI CDK Installation Overview

MPICH www.mcs.anl.gov/research/projects/mpi/mpich1 contains a wealth of information, including online documentation, tutorials, FAQ files, patch distributions, and information on how to submit bug reports to the MPICH developers. MPICH2 www.mcs.anl.gov/research/projects/mpi/mpich2 contains a wealth of information, including online documentation, tutorials, FAQ files, patch distributions, and information on how to submit bug reports to the MPICH2 developers. MVAPICH MVAPICH 1.1 supports many features for high performance, scalability, portability, and fault tolerance. It also supports a wide range of platforms. mvapich.cse.ohio-state.edu/overview/mvapich contains a wealth of information, including online documentation, tutorials, FAQ files, patch distributions, and how to submit bug reports to the MVAPICH developers.

Note
To use the PGI CDK version of MVAPICH, the prerequisite OpenFabrics (OFED) software must be installed. See www.openfabrics.org for details on OFED. ScaLAPACK - www.netlib.org/scalapack contains FAQ files and current distributions of ScaLAPACK

14

Chapter 3. Licensing
The PGI compilers and tools are license-managed. PGI software licensing uses the FlexNet Publisher (FNP) license management system from Flexera Software (www.flexerasoftware.com).

Licensing Terminology
Before discussing licensing, it is useful to have common terminology. License a legal agreement between ST and PGI end-users, to which users assent upon installation of any PGI product. The terms of the License are kept up-to-date in documents on pgroup.com and in the $PGI/ <platform>/<rel_number> directory of every PGI software installation. License keys ASCII text strings that enable use of the PGI software and are intended to enforce the terms of the License. License keys are typically stored in a file called license.dat that is accessible to the systems for which the PGI software is licensed.

License Keys
License Key Options
There are three types of license key options: starter, trial, and permanent. Starter License Keys When you first register for a PGI web account, your account activation email includes starter license keys. Starter keys are valid for 30 days from the date the account activation email is sent. Trial License Keys If you already have a PGI web account, you can use it to generate trial license keys, Trial license keys are valid for 15 days from the date they are generated. Permanent License Keys When you purchase a PGI license, your e-mail order confirmation includes complete instructions for logging in to the pgroup.com web page and generating permanent license keys. Permanent license keys are perpetual meaning they remain valid indefinitely with eligible versions of PGI software.

15

PGI License Setup Tool

License Key Capabilities

At the conclusion of the starter license key or trial license key evaluation interval, the PGI compilers and tools and any executable files generated cease to function. To retain functionality, any executables, object files, or libraries created using the PGI compilers with starter or trial license keys must be recompiled once permanent license keys in place. Executable files generated using permanent license keys are unconstrained, and run on any compatible system regardless of whether the PGI compilers are installed.

License Key Comparisons

Table 3.1. License Key Comparisons License Key Type Node-locked Limited duration Limited functionality Starter No Yes - 30 days Yes Trial Yes Yes - 15 days Yes Permanent Yes No No

License Key Dependencies

When using trial or permanent license keys, you must install the PGI software before obtaining your license keys. The license key generation process requires information generated during software installation. Starter license keys do not have this dependency.

Important
If you change the configuration of your system by adding or removing hardware, your license keys may become invalid. Please contact [email protected] if you expect to reconfigure your system to ensure that you do not temporarily lose the use of your PGI compilers and tools.

PGI License Setup Tool

PGI 2012 includes the PGI License Setup tool to help automate your license retrieval and installation process. You can use this tool to obtain both trial and permanent license keys. For more information on using the PGI License Setup Tool on windows, refer to Installation Steps for Windows, on page 49.

PGI Workstation Licensing

PGI Workstation is node-locked to a single system in a way that allows any user of the system to use the PGI compilers and tools. However, only a single user is allowed to run any of the PGI compilers or tools at a given time.

PGI Server Licensing

PGI Server supports multi-user, network floating licenses. Multiple users can use the PGI compilers and tools simultaneously from multiple systems on a network when those systems have a properly configured version of 16

Chapter 3. Licensing

PGI Server installed. The number of seats purchased for the license determines the limitation on the number of concurrent users. The license server for PGI Server can run on any of these supported systems: Linux, Windows, and MacOS.

PGI CDK Licensing

The PGI CDK supports multi-user, network floating licenses. Multiple users can use the PGI compilers and tools concurrently from multiple systems on a network when those systems have a properly configured version of the PGI CDK installed. The number of seats purchased for the license determines the limitation on the number of concurrent users.

Note
We recommend the license servicer run on the cluster master node.

The FlexNet License Manager

As part of the process of installing the PGI compilers and tools, you install and configure the FlexNet license management software. The instructions in the following chapters of this guide describe how to configure license daemons for Linux, Windows, or MacOS, including installation and start-up of the license services, and proper initialization of the LM_LICENSE_FILE and, for Windows, FLEXLM_BATCH environment variables.

License Support
All new PGI licenses include 60 days of PGI Subscription Service. For more information about this service and how to extend it, refer to Product Support, on page 7.

17

18

Chapter 4. PGI Installations on Linux

This chapter describes how to install PGI Workstation, PGI Server, or PGI CDK in a generic manner on a Linux system. It covers local and network installs and is applicable for permanent or trial installations. For installations on 32-bit x86 systems, the PGI installation script installs only the linux86 versions of the PGI compilers and tools. For installations on 64-bit x64 systems running a linux86-64 execution and development environment, the PGI installation script installs the linux86-64 version of the PGI compilers and tools. If the 32-bit gcc development package is already installed on the system, the 32-bit linux86 tools are also installed on a 64-bit x64 system. The 32-bit and 64-bit compilers, tools, and supporting components have the same command names, and the environment you target by default (linux86-64 or linux86) depends on the version of the compiler that comes first in your path settings.

Prepare to Install PGI Workstation or PGI Server on Linux

In preparation for installing PGI Workstation or PGI Server on Linux, first review the overview of the Linux installation process illustrated in Figure 4.1.

Note
For Linux installations, each user needs to set their environment variables properly to access the software, as described in section 4.4, End-user Environment Settings on Linux. In a typical local installation, the default installation base directory is /opt/pgi.

19

Prepare to Install PGI Workstation or PGI Server on Linux

Figure 4.1. Linux Installation Overview

20

Chapter 4. PGI Installations on Linux

Network Installations: If you choose to perform a network installation, you should specify: A shared file system for the installation base directory. A second directory name that is local to each of the systems where the PGI compilers and tools are used. This local directory contains the libraries to use when compiling and running on that machine. This directory selection approach allows a network installation to support a network of machines running different versions of Linux. To Prepare for the Installation: Locate your PGI Order Confirmation e-mail. This e-mail contains instructions for downloading the PGI software from the PGI web site as well as other information you need for generating your permanent license. It also contains your PGI Product Identification Number (PIN) should you need to contact PGI. Bring up a shell command window on your system. The installation instructions assume you are using csh, sh, ksh, bash, or some compatible shell. If you are using a shell that is not compatible with one of these shells, appropriate modifications are necessary when setting environment variables. Verify you have enough free disk space for the PGI installation. The uncompressed installation package requires 700 MB of free disk space. The linux86 platform requires up to 450 MB of free disk space, depending on the number of packages installed. The linux86-64 platform requires up to 1.4 GB of free disk space, depending on the number of packages installed. If you plan to use the PGI license tool, know how your computer accesses the Internet directly or through some sort of proxy server connection.

Note
If this computer is behind a firewall at your site, make sure it can access the Internet. If a proxy server is used, you need this additional information: The address (URL) of the proxy server. Whether the proxy server requires authentication and if so, the username and password. To generate license keys, log in to and account on the PGI website at www.pgroup.com/login. From this page you may also create an account or reset your password. In order to debug 32-bit applications on 64-bit Linux systems, the 32-bit ncurses libraries must be installed. The name of this package varies across the Linux distributions, but it contains a file with a name like libncurses.so.5. 21

Preparing to Install PGI CDK on Linux

Preparing to Install PGI CDK on Linux

To prepare for the installation: 1. Download the software. Unlike other PGI software, the PGI CDK is not generally available. To download the software, first log in to your PGI account at www.pgroup.com/login. Once you are logged in, click the Download Software link. If you don't see the PGI CDK listed as a product option on the Download page, contact PGI at [email protected]. 2. Bring up a shell command window on your system. The installation instructions assume you are using csh, sh, ksh, bash, or some compatible shell. If you are using a shell that is not compatible with one of these shells, appropriate modifications are necessary when setting environment variables. 3. Log in as root on the master node to install and verify your cluster.

Note
If you fail to do this, software is installed only on the master node. 4. Verify you have enough free disk space. The uncompressed installation package requires 700 MB of free disk space. The linux86 platform requires up to 450 MB of free disk space, depending on the number of packages installed. The linux86-64 platform requires up to 1.4 GB of free disk space, depending on the number of packages installed. 5. Install MVAPICH. (Optional) If you want to install MVAPICH, verify that you already have OpenFabrics (OFED) software installed on your system. MVAPICH is an InfiniBand library. See section 2.2 for more information. Before you begin the actual installation, review the PGI CDK Linux installation process illustrated in Figure 4.2.

22

Chapter 4. PGI Installations on Linux

Figure 4.2. PGI CDK Linux Installation Overview

Be certain that you know this information: Locate your PGI order confirmation e-mail. This e-mail contains instructions on how to download the PGI software from the PGI web page as well as other information you may need for generating your permanent license keys. It also contains your PGI Product Identification Number (PIN) that you need if you contact PGI. Know how your computer accesses the Internet directly or through some sort of proxy server connection.

Note
If this computer is behind a firewall at your site, make sure it can access the Internet. 23

Installation Steps for Linux

If a proxy is used, you need this additional information: The address (URL) of the proxy server. Whether the proxy server requires authentication and if so, the username and password. To log in to the PGI website to generate license keys, you need either an account (username and password) or a PIN code from the PGI order confirmation e-mail message from PGI Sales. The PIN code in the e-mail is in the section labeled: SHARING ADMINISTRATION. To generate license keys, log in to and account on the PGI website at www.pgroup.com/login. From this page you may also create an account or reset your password.

Installation Steps for Linux

Follow these instructions to install the software: 1. Unpack the PGI software. Download the software from www.pgroup.com or another electronic distribution site. In the instructions that follow, replace <tarfile> with the name of the file that you downloaded.

Note
The PGI products cannot be installed into the same directory where the tar file is unpacked. Use the following command sequence to unpack the tar file in a temporary directory before installation:
% % % % mkdir /tmp/pgi mv <tarfile>.tar.gz /tmp/pgi cd /tmp/pgi tar xpfz <tarfile>.tar.gz

2.

Run the installation script.

Note
The installation script for PGI Workstation and PGI Server is install and for the PGI CDK is installcdk. These instructions refer to these collectively as the installation script. The installation script must run to completion to properly install the software.

Note
If you are updating a previous release or wish to reinstall the PGI CDK, we recommend that you run the uninstallcdk script before running installcdk. If you are logged in as root, the entire cluster can be configured. If you are not logged in as root, the PGI CDK compilers and tools and MPICH, MPICH2, and MVAPICH libraries can be installed on your current machine; and be configured for that machine only. This will create a single node cluster and/or a cross-development installation. 24

Chapter 4. PGI Installations on Linux

Execute the following script in the directory where you unpacked the tar file:
% ./install

or
% ./installcdk

To successfully run this script to completion, do the following: Consent to the PGI end-user license agreement (EULA). If you are installing PGI Server, determine whether to perform a local installation or a network installation. Determine whether to install the optional components: ACML math library NVIDIA components MPICH Define where to place the installation directory. Determine whether to use the built-in utility to generate license keys. After the software is installed, the installation script performs system-specific customization and then initializes the licensing. If you are performing a network installation for PGI Server, you are asked for a common local directory on each system. The network installation uses this local directory, or creates it if it does not exist, on each system to store system-specific header files and libraries. The PGI CDK installation script installs all of the binaries for the PGI compilers and tools, MPICH, MPICH2, MVAPICH and ScaLAPACK in the $PGI directory tree in the appropriate bin, include, lib, and man subdirectories. You are prompted for various information about how to configure your cluster as the script executes. Once the installation script has completed, exit the root shell.

Important
If you choose not to generate license keys at installation time, record the FlexNet hostid and hostname that are echoes to the screen.

Tip
In case you need to retrieve FlexNet information at a later time, the information is saved to the file /opt/pgi/license.info, where /opt/pgi is the installation directory. 3. Make PGI products accessible. When the installation script has completed, execute the following commands to make the PGI products accessible and to initialize your environment for use by FlexNet.

25

Installation Steps for Linux

Note
Each user must issue the follow sequence of commands to initialize the shell environment prior to using the PGI compilers and tools. For linux86-64: To use the linux86-64 version of the compilers and tools, execute the following commands, assuming you have installed in the default /opt/pgi directory. In csh, use these commands:
% % % % setenv PGI /opt/pgi set path=(/opt/pgi/linux86-64/12.10/bin $path) setenv MANPATH "$MANPATH":/opt/pgi/linux86-64/12.10/man setenv LM_LICENSE_FILE "$LM_LICENSE_FILE":/opt/pgi/license.dat

In bash, sh, or ksh, use these commands:

$ $ $ $ PGI=/opt/pgi; export PGI PATH=/opt/pgi/linux86-64/12.10/bin:$PATH; export PATH MANPATH=$MANPATH:/opt/pgi/linux86-64/12.10/man; export MANPATH LM_LICENSE_FILE=$LM_LICENSE_FILE:/opt/pgi/license.dat;export LM_LICENSE_FILE

For linux86: To use only the linux86 version of the compilers and tools, or to target linux86 as the default, use a setup similar to the previous one, changing the path settings as illustrated in the following commands. In csh, use these commands:
% % % % setenv PGI /opt/pgi set path=(/opt/pgi/linux86/12.10/bin $path) setenv MANPATH "$MANPATH":/opt/pgi/linux86/12.10/man setenv LM_LICENSE_FILE "$LM_LICENSE_FILE":/opt/pgi/license.dat

In bash, sh, or ksh, use these commands:

$ PATH=/opt/pgi/linux86/12.10/bin:$PATH; export PATH $ MANPATH=$MANPATH:/opt/pgi/linux86/12.10/man; export MANPATH $ LM_LICENSE_FILE=$LM_LICENSE_FILE:/opt/pgi/license.dat;export LM_LICENSE_FILE

Note
You should add these commands to your shell startup files to ensure that you have access to the PGI products in future login sessions. 4. Verify the release number of the installed software. To verify the release number of the products you have installed, use the -V option on any of the compiler commands, as illustrated in the following examples. If you use v instead, you can also see the sequence of steps the compiler uses to compile and link programs for execution on your system. 26

Chapter 4. PGI Installations on Linux

Note
These commands can be successfully executed even if the files x.f or x.c do not exist and you have not completed the licensing phase of the installation. Use them to check that you have installed the proper version of the compilers and have initialized your environment to enable access to that version. 5. Generate and install license keys.

Note
This step is necessary only if you chose not to allow the installation script to perform these tasks for you. All of the PGI compilers and tools are license-managed and require installation of license keys to make the PGI software operational. The other components of the PGI CDK, including MPICH, MPICH2, MVAPICH, and ScaLAPACK are open source products that are not license-managed. To obtain license keys, you need the following information: An account on the PGI website. You probably created this account when you downloaded the PGI software. If you purchased a license without creating an account, one was created for you when your order was processed. Please check for an activation e-mail from [email protected]. If you dont have an account, you can create one at: www.pgroup.com/register. If you purchased a PGI CDK license but do not see the software listed for download, then contact [email protected]. The FlexNet hostid and hostname of the computer on which the software is installed, which was echoed to your screen by the installer.

Note
You can also obtain your FlexNet hostid by using the following command after you have installed the products and initialized the environment variables:
% lmutil lmhostid

You should see a message similar to the following with one or more hostids displayed. In this example you can use either 12345678abcd or edcba9876543, but not both, as the hostid.
The FlexNet host ID of this machine is "12345678abcd edcba9876543".

Tip
Hostids come from configured network cards. If you use your computer in multiple environments, you may want to run the following command in each environment to see what 27

Installation Steps for Linux

hostids are configured. Then, to reduce potential license problems, choose the hostid that occurs in all your environments.

Generate License Keys

Log in to your PGI web account at www.pgroup.com/login. You should see a screen similar to the following:

To generate permanent license keys: 1. Click Create permanent keys. 2. Click the PIN associated with the product for which you wish to generate license keys. If you dont see any PINs listed, you first need to tie one to your account. a. Obtain your PIN code from your original PGI order confirmation e-mail, in the section labeled: SHARING ADMINISTRATION. b. Click the link: Tie a PIN to this account. c. Follow the instructions provided. 3. Click License keys to generate the keys. To generate trial license keys: 1. Click Create trial keys. 2. Accept the terms of the agreement. 3. Enter the hostid exactly as it appears in the message that is displayed during installation or when you issue the command:
% lmutil lmhostid

If multiple host ids are displayed, select any one of them to use as the hostid. 4. Click the Generate license key button. 28

Chapter 4. PGI Installations on Linux

Install License Keys

Once you have generated your trial or permanent license keys, copy, and then paste them into the file: /opt/pgi/license.dat, substituting the appropriate installation directory path if you have not installed in the default /opt/pgi directory. The license.dat depends on the product you are installing,. However, each license.dat file looks somewhat similar to the following sample file from a PGI Fortran Workstation installation:
SERVER <hostname> <hostid> 27000 DAEMON pgroupd PACKAGE PGI2012-workstation-complete pgroupd 2012.1231 8FE2A7F11183 \ COMPONENTS="pgi-hpf-lin64 pgi-f95-lin64 pgi-f77-lin64 \ pgi-cc-lin64 pgi-cpp-lin64 pgi-hpf-lin32 pgi-f95-lin32 \ pgi-f77-lin32 pgi-cc-lin32 pgi-cpp-lin32 pgi-hpf-lin32 \ pgi-f95-lin32 pgi-f77-lin32 pgi-cc-lin32 pgi-cpp-lin32 \ pgi-prof pgi-dbg pgi-dbg-gui " \ OPTIONS=SUITE SIGN="08AF B25A 295F BB3A CA7D \ F564 0973 BB69 2B66 187A 1BE6 6E65 BC95 2152 9E75 03BC A41D \ 3422 52DF 15C4 37BB 0D7A 7F65 47E7 8B70 0F5B 987D 9A69 1FFC 2270" FEATURE PGI2012-workstation-complete pgroupd 2012.1231 permanent 1 \ EA26405D17C1 VENDOR_STRING=123456:4:ws:accel \ HOSTID=001ec960ef1c DUP_GROUP=U SUITE_DUP_GROUP=U SIGN="0667 \ D67C 3E9E A935 287A AE93 035B 8316 CC01 F035 80CD 57E1 9F6A \ 1E01 BD51 09DE 3BB6 6467 432E ADAF A9D7 E9B8 1E08 BF8F D7C5 \ E3F2 F458 8779 2420 2F97" PACKAGE PGI71-workstation-complete pgroupd 7.1 4663E4ABD89E \ COMPONENTS="pghpf-linux86-64:7.1 pgf90-linux86-64:7.1 \ pgf77-linux86-64:7.1 pgcc-linux86-64:7.1 pgcpp-linux86-64:7.1 \ pghpf-linux86:7.1 pgf90-linux86:7.1 pgf77-linux86:7.1 \ pgcc-linux86:7.1 pgcpp-linux86:7.1 pghpf-linux86:7.1 \ pgf90-linux86:7.1 pgf77-linux86:7.1 pgcc-linux86:7.1 \ pgcpp-linux86:7.1 pgprof:7.1 pgdbg:7.1 pgdbg-gui:7.1 \ pgdbg-linux86-64:7.1" OPTIONS=SUITE SIGN="07C2 DA82 2505 0A20 \ B51E B86F D47E 2765 BB92 5EF7 0756 A652 8B80 1E2B A299 18D5 \ F82F 243B 0368 D580 9E0B 99DF A989 D202 3AAD BCC6 1A3C F517 24C6 013B" FEATURE PGI71-workstation-complete pgroupd 7.1 permanent 1 \ 35CB2A57B14C VENDOR_STRING=123456:4:ws HOSTID=001ec960ef1c \ DUP_GROUP=U SUITE_DUP_GROUP=U SIGN="023C A239 D028 AC2C 7CDF \ 74C2 B32A 0E9D C68C FFAB FF8D 25CE BA74 E8C6 CCA1 076B 3560 \ 4720 9A82 53F0 C1A6 1811 35D4 F8C2 A8D2 4427 4478 EB44 76E5 FCE1"

In your license file: <hostid> should match the hostid you submitted above when you generated your license keys. If necessary, you can enter or edit the <hostname> entry manually, but you cannot edit the <hostid> entry or you will invalidate the license keys. The date in the file, in this example 2012.1231, represents the expiration date for your subscription service. For example, if your subscription date for your PGI PIN (Product Identification Number) is August 1, 2012, then the date in your file is 2012.0801. For information on how to renew your subscription, refer to Product Support, on page 7

29

Installation Steps for Linux

The six digits immediately following the VENDOR_STRING = in the feature line component, 123456 of VENDOR_STRING=123456:4 in this example, represent the PIN for this installation. You have a similar unique PIN for your installation.

Note
Please include your PIN when contacting PGI for technical support for the products you have purchased. This PIN is also in your order confirmation e-mail. 6. Start the license manager daemon.

Important
If you used the installation script to do this or if you are evaluating PGI software with trial license keys, you do not need to perform this step and can proceed to Step 7. Installations in a directory other than the default /opt/pgi

Note
The following refers to the shell script template for linux86-64. If you have installed only linux86, please substitute linux86 for linux86-64. If you installed the compilers in a directory other than /opt/pgi, do this: 1. Edit the shell script template $PGI/linux86-64/12.10/bin/lmgrd.rc. 2. Substitute the correct installation directory for /opt/pgi in the section of the script entitled Where to find the PGI Software. 3. Save the file and exit the editor. Issue the following command to start the license server and pgroupd license daemon running on your system:
% cd $PGI/linux86-64/12.10/bin/ % ./lmgrd.rc start

Tip
To use the more restrictive access of invoking lmgrd with the -local switch, refer to the lmgrd.rc file for a description of the -local switch and how to use it. If you wish to stop the license server and pgroupd license daemon at a later time, you can do so with the command:
% cd $PGI/linux86-64/12.10/bin/ % ./lmgrd.rc stop

30

Chapter 4. PGI Installations on Linux

Start license server upon reboot: To start the license server and pgroupd license daemon each time your system is booted: 1. Log in as root.

Note
You must be logged in as root to successfully execute these commands. 2. Verify you have set the PGI environment variable as described in Step 3 of this installation process. 3. Execute the following two commands:
% cp $PGI/linux86/12.10/bin/lmgrd.rc /etc/init.d/lmgrd % ln -s /etc/init.d/lmgrd /etc/rc.d/rc3.d/S90lmgrd

There are two values in this example that may be different on your system: Your rc files may be in a directory other than the one in the example: /etc/init.d. If the rc files are in a directory such as /etc/rc.d/init.d, then substitute that location in the example. Your systems default runlevel may be something other than 3, the level used in this example. You can run /sbin/runlevel to check the systems runlevel. If the runlevel on your systems is different, then you must set the correct subdirectory; use your systems runlevel in place of the 3 in the preceding example. chkconfig(8) Utility Most Linux distributions include the chkconfig(8) utility which manages the runlevel scripts. If your system has this tool and you wish to use it, then run the following commands:
% cp $PGI/linux86/12.10/bin/lmgrd.rc /etc/init.d/ % /sbin/chkconfig --add lmgrd

These commands create the appropriate links in the /etc/init.d directory hierarchy. For more information on chkconfig, please refer to the manual page.

Important
You can co-install Release 2012 with Release 2011, 2010, 9.x, 8.x, 7.x, 6.x and/or 5.2; and you can use any of these versions of the compilers and tools with the latest versions of lmgrd and pgroupd and a single Release 2012 license file. If you use the lmgrd.rc file to start lmgrd automatically after a reboot of your system, you need to modify your lmgrd script in the /etc/rc.d or /etc/init.d directory to use the latest lmgrd daemon. For example, your lmgrd script may look like this, where <target> is replaced appropriately with linux86 or linux86-64. 31

Installation Steps for Linux

## Path to master daemon lmgrd # Commented out previous path to 11.8: #LMGRD=$PGI/<target>/11.8/bin/lmgrd LMGRD=$PGI/<target>/12.10/bin/lmgrd ## Command to stop lmgrd #Commented out previous path to 11.8: #LMUTIL=$PGI/<target>/11.8/bin/lmutil LMUTIL=$PGI/<target>/12.10/bin/lmutil

7.

Review documentation. You can view the online HTML and PDF documentation using any web browser by opening the file:
$PGI/linux86-64/12.10/doc/index.htm

or
$PGI/linux86/12.10/doc/index.htm

You may want to bookmark this location for easy future reference to the online manuals. 8. Complete network installation tasks.

Note
Skip this step if you are not installing PGI Server using a network installation. For a network installation, you must run the local installation script on each system on the network where the compilers and tools will be available for use. If your installation base directory is /opt/pgi and /usr/pgi/shared/12.10 is the common local directory, then run the following commands on each system on the network.
/opt/pgi/linux86/12.10/bin/makelocalrc -x /opt/pgi/linux86/12.10 \ -net /usr/pgi/shared/12.10 /opt/pgi/linux86-64/12.10/bin/makelocalrc -x /opt/pgi/linux86-64/12.10 \ -net /usr/pgi/shared/12.10

These commands create a system-dependent file localrc.machinename in both of these directories: /opt/pgi/linux86/12.10/bin and /opt/pgi/linux86-64/12.10/bin. The commands also create the following three directories containing libraries and shared objects specific to the operating system and system libraries on that machine:
/usr/pgi/shared/12.10/lib /usr/pgi/shared/12.10/liblf /usr/pgi/shared/12.10/lib64.

Note
The makelocalrc command does allow the flexibility of having local directories with different names on different machines. However, using the same directory on different machines allows users to easily move executables between systems that use PGI-supplied shared libraries. Installation of the PGI products for Linux is now complete. For assistance with difficulties related to the installation, send e-mail to [email protected]. 32

Chapter 4. PGI Installations on Linux

The following two sections contain information detailing the directory structure of the PGI installation, and instructions for PGI end-users to initialize environment and path settings to use the PGI compilers and tools.

Typical Directory Structure for Linux

If you specify /opt/pgi as the base directory for installation, the following directory structure is created by the PGI installation script: Table 4.1. Baseline PGI Installation Linux Directory Structure This directory...
/opt/pgi/linux86/12.10/bin /opt/pgi/linux86/12.10/lib /opt/pgi/linux86/12.10/liblf

Contains... linux86 32-bit compilers & tools linux86 32-bit runtime libraries linux86 32-bit large-file support libs (used by Mlfs) linux86 32-bit header files linux86-64 compilers & tools linux86-64 mcmodel=small libs linux86-64 fpic shared libraries for mcmodel=medium development linux86-64 header files Re-distributable runtime libraries Compiler examples Documentation UNIX-style man pages JAVA environment for PGDBG and PGPROF graphical user interfaces For Workstation and Server installations: Fortran 90 source files for included modules For PGI CDK installations: PGHPF MPI interface file, mpi.c MPICH1 scripts and libraries. MPICH2 scripts and libraries. MVAPICH scripts and libraries.

/opt/pgi/linux86/12.10/include /opt/pgi/linux86-64/12.10/bin /opt/pgi/linux86-64/12.10/lib /opt/pgi/linux86-64/12.10/libso

/opt/pgi/linux86-64/12.10/include /opt/pgi/linux86/12.10/REDIST /opt/pgi/linux86-64/12.10/REDIST /opt/pgi/linux86/12.10/EXAMPLES /opt/pgi/linux86-64/12.10/EXAMPLES /opt/pgi/linux86/12.10/doc /opt/pgi/linux86-64/12.10/doc /opt/pgi/linux86/12.10/man /opt/pgi/linux86-64/12.10/man /opt/pgi/linux86/12.10/jre /opt/pgi/linux86-64/12.10/jre /opt/pgi/linux86/12.10/src /opt/pgi/linux86-64/12.10/src

/opt/pgi/linux86/12.10/mpi/mpich /opt/pgi/linux86-64/12.10/mpi/mpich /opt/pgi/linux86/12.10/mpi2/mpich /opt/pgi/linux86-64/12.10/mpi2/mpich /opt/pgi/linux86/12.10/mpi/mvapich /opt/pgi/linux86-64/12.10/mpi/mvapich

33

End-user Environment Settings

This directory...
/opt/pgi/linux86/12.10/mpi/mpich/share /opt/pgi/linux86-64/12.10/mpi/mpich/share /opt/pgi/linux86/12.10/EXAMPLES/mpi /opt/pgi/linux86-64/12.10/EXAMPLES/mpi /opt/pgi/linux86/12.10/mpi/mpich/sbin /opt/pgi/linux86-64/12.10/mpi/mpich/sbin

Contains... MPICH machines .LINUX files MPI Examples MPICH tstmachines

Additionally, a PGI Server installation on a network creates the following directories: Table 4.2. PGI Server Linux Directory Structure Additions This directory...
/opt/pgi/linux86/12.10/lib-linux86-g

Contains... linux86 32-bit libpgc library dependent on the version of glibc installed on each machine linux86 32-bit header files dependent on the version of glibc or gcc installed on each machine linux86-64 64-bit header files dependent on the version of glibc or gcc installed on each machine

/opt/pgi/linux86/12.10/include-g

/opt/pgi/linux86-64/12.10/include-g

End-user Environment Settings

PGI Workstation and PGI Server
After software installation is complete, each users shell environment must be initialized to use the PGI compilers and tools. Assume the license file is in /opt/pgi/license.dat, and the lmgrd license manager is running.

Note
Each user must issue the following sequence of commands to initialize the shell environment before using the PGI compilers and tools. 64-bit as default To make the 64-bit PGI compilers and tools the default: In csh, use these commands:
% % % % setenv PGI /opt/pgi setenv MANPATH "$MANPATH":$PGI/linux86-64/12.10/man setenv LM_LICENSE_FILE $PGI/license.dat set path = ($PGI/linux86-64/12.10/bin $path)

Once the 64-bit compilers are the defaults, you can make the MPICH commands and MPICH man pages accessible using these csh commands: 34

Chapter 4. PGI Installations on Linux

% set path = ($PGI/linux86-64/12.10/mpi/mpich/bin $path) % setenv MANPATH "$MANPATH":$PGI/linux86-64/12.10/mpi/mpich/man

In bash, sh, or ksh, use these commands:

$ $ $ $ PGI=/opt/pgi; export PGI MANPATH=$MANPATH:$PGI/linux86-64/12.10/man; export MANPATH LM_LICENSE_FILE=$PGI/license.dat; export LM_LICENSE_FILE PATH=$PGI/linux86-64/12.10/bin:$PATH; export PATH

Once the 64-bit compilers are the defaults, you can make the MPICH commands and MPICH man pages accessible using these commands.
$ $ $ $ PATH=$PGI/linux86-64/12.10/mpi/mpich/bin:$PATH export PATH MANPATH=$MANPATH:$PGI/linux86-64/12.10/mpi/mpich/man export MANPATH

32-bit as default To make the 32-bit PGI compilers and tools the default: In csh, use these commands:
% % % % setenv PGI /opt/pgi setenv MANPATH "$MANPATH":$PGI/linux86/12.10/man setenv LM_LICENSE_FILE $PGI/license.dat set path = ($PGI/linux86/12.10/bin $path)

Once the 32-bit compilers are the defaults, you can make MPICH commands and MPICH man pages accessible using these csh commands.
% set path = ($PGI/linux86/12.10/mpi/mpich/bin $path) % setenv MANPATH "$MANPATH":$PGI/linux86/12.10/mpi/mpich/man

In bash, sh, or ksh, use these commands:

$ $ $ $ PGI=/opt/pgi; export PGI MANPATH=$MANPATH:$PGI/linux86/12.10/man; export MANPATH LM_LICENSE_FILE=$PGI/license.dat; export LM_LICENSE_FILE PATH=$PGI/linux86/12.10/bin:$PATH; export PATH

Once the 32-bit compilers are the defaults, you can make MPICH commands and MPICH man pages accessible using these commands.
$ PATH=$PGI/linux86/12.10/mpi/mpich/bin:$PATH; export PATH $ MANPATH=$MANPATH:$PGI/linux86/12.10/mpi/mpich/man; export MANPATH

PGI CDK
With either the trial or permanent license keys in place, choose the applicable commands from the following lists and execute them to make the products you have purchased accessible.

Important
Each user must issue the appropriate following sequence of commands to initialize their shell environment before using the PGI compilers and tools. 35

End-user Environment Settings

Important
For the following path settings, the installation is in the default directory: /opt/pgi Set Environment Variables for Licensing Execute the following commands to initialize your environment for use of FlexNet licensing. In csh, use these commands:
% setenv PGI /opt/pgi % setenv LM_LICENSE_FILE "$LM_LICENSE_FILE":/opt/pgi/license.dat

In bash, sh or ksh, use these commands:

$ PGI=/opt/pgi; export PGI $ LM_LICENSE_FILE=$LM_LICENSE_FILE:$PGI/license.dat; export LM_LICENSE_FILE

Set End-user PATH Variables This section describes the commands required to access MPICH, MPICH2, and MVAPICH as well as the man pages associated with each of these.

Note
If you install only the linux86 versions of the compilers or wish to target linux86 as the default, use a setup similar to the x64 linux86-64 one shown here, substituting linux86 in place of linux86-64 in all path settings.

MPICH access
To access MPICH and the MPICH man pages for x64 linux86-64, execute these commands: In csh, use these commands:
% set path = (/opt/pgi/linux86-64/12.10/bin \ /opt/pgi/linux86-64/12.10/mpi/mpich/bin $path) % setenv MANPATH "$MANPATH":/opt/pgi/linux86-64/12.10/mpi/mpich/man

In bash, sh or ksh, use these commands:

$ PATH=/opt/pgi/linux86-64/12.10/bin:/opt/pgi/linux86-64/12.10/mpi/mpich/bin:$PATH $ MANPATH=$MANPATH:/opt/pgi/linux86-64/12.10/mpi/mpich/man $ export PATH MANPATH

MPICH2 access
To access MPICH2 and the MPICH2 man pages for x64 linux86-64, execute these commands: In csh, use these commands:
% set path = (/opt/pgi/linux86-64/12.10/bin \ /opt/pgi/linux86-64/12.10/mpi2/mpich/bin $path) % setenv MANPATH "$MANPATH":/opt/pgi/linux86-64/12.10/mpi2/mpich/share/man

36

Chapter 4. PGI Installations on Linux

In bash, sh or ksh, use these commands:

$ PATH=/opt/pgi/linux86-64/12.10/bin:/opt/pgi/linux86-64/12.10/mpi2/mpich/bin:$PATH $ MANPATH=$MANPATH:/opt/pgi/linux86-64/12.10/mpi2/mpich/share/man $ export PATH MANPATH

MVAPICH access
To access MVAPICH and the MVAPICH man pages for x64 linux86-64, execute these commands: In csh, use these commands:
% set path = (/opt/pgi/linux86-64/12.10/bin \ /opt/pgi/linux86-64/12.10/mpi/mpich/bin $path) % setenv MANPATH "$MANPATH":/opt/pgi/linux86-64/12.10/mpi/mpich/man

In bash, sh or ksh, use these commands:

$ PATH=/opt/pgi/linux86-64/12.10/bin:/opt/pgi/linux86-64/12.10/mpi/mvapich/bin:$PATH $ MANPATH=$MANPATH:/opt/pgi/linux86-64/12.10/mpi/mvapich/man $ export PATH MANPATH

Common Linux Installation Issues

If you are having problems executing the debugger or profiler, you might want to check out the Java Runtime Environment.

Java Runtime Environment (JRE)

The PGI debugger and profiler use Java SE 6. On 64-bit systems PGDBG and PGPROF use a 64-bit JRE; on 32bit systems they use a 32-bit JRE. The correct JRE is important because PGDBG and PGPROF make calls to native code, which must be of compatible "bitness" to function properly.

37

38

Chapter 5. Installations on Apple Mac OS X

This section describes how to install PGI software on an Apple computer running Mac OS X. It covers local installs, and is applicable to permanent or trial installations.

Note
PGI Workstation and PGI Server for Mac OS X are supported on Intel processor-based Macintosh computers running OS X version 10.6 or greater with Apple Xcode 3.2 or greater installed. Xcode is available from http://developer.apple.com. For installations on 32-bit x86 systems, the PGI installation process installs only the osx86 versions of the PGI compilers and tools. For installations on 64-bit x64 systems running an osx86-64 execution and development environment, the PGI installation process installs the osx86-64 version of the PGI compilers and tools. If the 32-bit gcc development package is already installed on the system, the 32-bit osx86 tools are installed on a 64-bit x64 system. The 32-bit and 64-bit compilers, tools, and supporting components have the same command names, and the environment you target by default, either osx86-64 or osx86, depends on the version of the compiler that comes first in your path settings. The default installation base directory is /opt/pgi.

Preparing to Install on MacOS

To prepare for the installation: Verify you have enough free disk space. On the osx86 platform, PGI installation requires 250 MB of free disk space. On the osx86-64 platform, PGI installation requires 500 MB of free disk space. Verify that Xcode 2.5 or greater is installed. 39

Installation Steps for MacOS

If you know how to run Xcode, start Xcode and click About Xcode to verify the version is 2.5 or greater. If you do not know how to run Xcode or are uncertain if it is installed on your system, do the following: 1. From the Apple Menu, select About This Mac. 2. Click More Info. 3. Select System profiler | Software | Applications. 4. Scroll through the alphabetical list and verify Xcode is in it. 5. Verify the version is 2.5 or greater.

Note
PGI software for MacOS requires the Xcode application, which provides several components of the tool chain, including the system assembler, linker, and runtime libraries. However, PGI software runs in Terminal, not in the Xcode IDE, and the PGDBG debugger and PGPROF profiler have their own GUIs. In preparation for installing PGI software on MacOS, first review Figure 5.1, an overview of the installation process.

Installation Steps for MacOS

Once you have prepared for the installation, follow these instructions to install the software:

Note
If you intend to use CUDA Fortran or the PGI Accelerator Fortran or C compilers, then install PGI Workstation before installing PGI Accelerator. 1. Access the installation package. Download the software from www.pgroup.com or another electronic distribution site. The file you download is PGI-Workstation-120.dmg. If it didnt mount automatically, open this file to mount it. 2. Install the software. Double-click the PGI Workstation 2012.pkg, which is part of the mounted disk. Follow the installation instructions. 1. When you see the initial system check dialog, click continue to allow the installation script to check that your system has the required components for installing the software, such as Xcode 2.5 or greater and gcc. 2. Select the drive and, if you want, also select an installation directory other than the default directory: /opt/pgi. After the software is installed, the installation script performs some system-specific customization and then initializes for licensing. 40

Chapter 5. Installations on Apple Mac OS X

Figure 5.1. MacOS Installation Overview

3.

Make PGI products accessible and prepare for licensing. Once software installation is complete, you can bring up a PGI Terminal window by double-clicking the PGI2012.terminal file in the installation directory, typically /opt/pgi. If Terminal is currently open, you can bring up a PGI window by using the New Windows and New Tab commands, and then selecting PGI2012. 41

Installation Steps for MacOS

4.

Verify the release number. To verify the release number of the products you have installed, use the -V option on any of the compiler commands, as illustrated in the following examples. If you use v instead, you also see the sequence of steps the compiler uses to compile and link programs for execution on your system. For Fortran 77, use: For Fortran 2003, use: For C++, use: For ANSI C, use: pgf77 -V x.f pgfortran -V x.f pgCC V x.cc pgcc -V x.c

Note
These commands can be successfully executed even if the files x.f or x.c do not exist and you have not completed the licensing phase of the installation. Use it to check that you have installed the proper version of the compilers and have initialized your environment to enable access to that version. 5. Generate and install license keys. All of the PGI compilers and tools are license-managed and require the installation of license keys to make the PGI software operational. To obtain license keys, you need the following information: An account on the PGI website. You probably created this account when you downloaded the PGI software. If you purchased a license without creating an account, one was created for you when your order was processed. Please check for an activation e-mail from [email protected]. If you dont have an account, you can create one at: www.pgroup.com/register The FlexNet hostid and hostname of the computer on which the software is installed. The installer echoes this information to your screen.

Note
You can obtain your FlexNet hostid by using the following command in a PGI Terminal window.
% lmutil lmhostid

You should see a message similar to the following with one or more hostids displayed.
The FlexNet host ID of this machine is "12345678abcd edcba9876543".

You can use either 12345678abcd or edcba9876543, but not both, as the hostid.

42

Chapter 5. Installations on Apple Mac OS X

Tip
Hostids come from configured network cards. If you use your computer in multiple environments, you may want to run the following command in each environment to see what hostids are configured. Then, to reduce potential license problems, choose the hostid that occurs in all your environments. To locate your hostname, use this command:
% lmutil lmhostid -hostname

The above command returns output in the form: HOSTNAME=xxxxx. However, when you create a license, use only the actual hostname, that is xxxxx in the hostname field. For example, if the information displayed is HOSTNAME=abcd1234, then use only abcd1234

Generate License Keys

Log in to your PGI web account at www.pgroup.com/login. You should see a screen similar to the following:

To generate permanent license keys: 1. Click Create permanent keys. 2. Click the PIN associated with the product for which you wish to generate license keys. If you dont see any PINs listed, you first need to tie one to your account. a. Obtain your PIN code from your original PGI order confirmation e-mail, in the section labeled: SHARING ADMINISTRATION. b. Click the link: Tie a PIN to this account. c. Follow the instructions provided. 3. Click License keys to generate the keys.

43

Installation Steps for MacOS

To generate trial license keys: 1. Click Create trial keys. 2. Accept the terms of the agreement. 3. Enter the hostid exactly as it appears in the message that is displayed during installation or when you issue the command:
% lmutil lmhostid

If multiple host ids are displayed, select any one of them to use as the hostid. 4. Click the Generate license key button.

Install License Keys

Once you have generated your trial or permanent license keys, copy and paste them into the file /opt/ pgi/license.dat, or substitute the appropriate installation directory path if you have not installed in the default /opt/pgi directory. For example, if you have purchased PGI Workstation for MacOS, the license.dat file should look similar to the following:
SERVER <hostname> <hostid> 27000 DAEMON pgroupd PACKAGE PGI2012-workstation-complete pgroupd 2012.1231 8FE2A7F11183 \ COMPONENTS="pgi-hpf-lin64 pgi-f95-lin64 \ pgi-f77-lin64 pgi-cc-lin64 pgi-cpp-lin64 \ pgi-hpf-lin32 pgi-f95-lin32 pgi-f77-lin32 \ pgi-cc-lin32 pgi-cpp-lin32 pgi-hpf-lin32 \ pgi-f95-lin32 pgi-f77-lin32 pgi-cc-lin3 \ pgi-cpp-lin32 pgi-prof pgi-dbg \ pgi-dbg-gui" OPTIONS=SUITE SIGN="08AF B25A 295F BB3A CA7D \ F564 0973 BB69 2B66 187A 1BE6 6E65 BC95 2152 9E75 03BC A41D \ 3422 52DF 15C4 37BB 0D7A 7F65 47E7 8B70 0F5B 987D 9A69 1FFC 2270" FEATURE PGI2012-workstation-complete pgroupd 2012.1231 permanent 1 \ EA26405D17C1 VENDOR_STRING=123456:4:ws:accel \ HOSTID=001ec960ef1c DUP_GROUP=U SUITE_DUP_GROUP=U SIGN="0667 \ D67C 3E9E A935 287A AE93 035B 8316 CC01 F035 80CD 57E1 9F6A \ 1E01 BD51 09DE 3BB6 6467 432E ADAF A9D7 E9B8 1E08 BF8F D7C5 \ E3F2 F458 8779 2420 2F97" PACKAGE PGI71-workstation-complete pgroupd 7.1 4663E4ABD89E \ COMPONENTS="pghpf-linux86-64:7.1 pgf90-linux86-64:7.1 \ pgf77-linux86-64:7.1 pgcc-linux86-64:7.1 pgcpp-linux86-64:7.1 \ pghpf-linux86:7.1 pgf90-linux86:7.1 pgf77-linux86:7.1 \ pgcc-linux86:7.1 pgcpp-linux86:7.1 pghpf-linux86:7.1 \ pgf90-linux86:7.1 pgf77-linux86:7.1 pgcc-linux86:7.1 \ pgcpp-linux86:7.1 pgprof:7.1 pgdbg:7.1 pgdbg-gui:7.1 \ pgdbg-linux86-64:7.1" OPTIONS=SUITE SIGN="07C2 DA82 2505 0A20 \ B51E B86F D47E 2765 BB92 5EF7 0756 A652 8B80 1E2B A299 18D5 \ F82F 243B 0368 D580 9E0B 99DF A989 D202 3AAD BCC6 1A3C F517 24C6 013B" FEATURE PGI71-workstation-complete pgroupd 7.1 permanent 1 \ 35CB2A57B14C VENDOR_STRING=123456:4:ws HOSTID=001ec960ef1c \ DUP_GROUP=U SUITE_DUP_GROUP=U SIGN="023C A239 D028 AC2C 7CDF \ 74C2 B32A 0E9D C68C FFAB FF8D 25CE BA74 E8C6 CCA1 076B 3560 \ 4720 9A82 53F0 C1A6 1811 35D4 F8C2 A8D2 4427 4478 EB44 76E5 FCE1"

44

Chapter 5. Installations on Apple Mac OS X

In your license file: <hostid> should match the hostid you submitted above when you generated your license keys. If necessary, you can enter or edit the <hostname> entry manually, but you cannot edit the <hostid> entry or you will invalidate the license keys. The date in the file, in this example 2012.1231, represents the expiration date for your subscription service. For example, if your subscription date for your PGI Product Identification Number (PIN) is August 1, 2012, then the date in your file is 2012.0801. For information on how to renew your subscription, refer to Product Support, on page 7 The six digits immediately following the = in the feature line component, VENDOR_STRING=123456:4 represent the PIN for this installation, in this example 123456. You have a similar unique PIN for your installation. 6. Start the license manager daemon.

Important
If you are evaluating PGI Workstation with trial keys, you do not need to perform this step and can proceed to Step 7. Follow these steps to start the license server and pgroupd license daemon running on your system: 1. Use the sudo command to get a root bash shell; enter your password:
% sudo bash <password>

2. Create the directory /Library/StartupItems/PGI:

% mkdir /Library/StartupItems/PGI

3. Copy the PGI license configuration files:

% cp /opt/pgi/PGI /Library/StartupItems/PGI/PGI % cp /opt/pgi/StartupParameters.plist \ /Library/StartupItems/PGI/StartupParameters.plist

4. Start the license server:

% cd /Library/StartupItems/PGI % ./PGI start

The license server should now be running. It should restart automatically whenever you reboot. Installation of your FlexNet licensing is now complete. For assistance with difficulties related to the installation, send e-mail to [email protected].

45

Typical Directory Structure for MacOS

7.

Review documentation. You can view the online HTML and PDF documentation using any web browser by opening the file:
/opt/pgi/osx86/12.10/doc/index.htm

or
/opt/pgi/osx86-64/12.10/doc/index.htm

You may want to bookmark this location for easy future reference to the online manuals.

Typical Directory Structure for MacOS

If you specify /opt/pgi as the base directory for installation, the following directory structure is created during the PGI installation process: Table 5.1. MacOS Directory Structure Name of directory
/opt/pgi/osx86/12.10/bin /opt/pgi/osx86/12.10/lib /opt/pgi/osx86/12.10/include /opt/pgi/osx86/12.10/doc /opt/pgi/osx86/12.10/man /opt/pgi/osx86/12.10/src /opt/pgi/osx86/12.10/mpi /opt/pgi/osx86-64/12.10/bin /opt/pgi/osx86-64/12.10/lib /opt/pgi/osx86-64/12.10/include /opt/pgi/osx86-64/12.10/doc /opt/pgi/osx86-64/12.10/doc /opt/pgi/osx86-64/12.10/man /opt/pgi/osx86-64/12.10/src /opt/pgi/osx86-64/12.10/mpi

Contents osx86 32-bit compilers & tools osx86 32-bit runtime libraries osx86 32-bit header files Documentation UNIX-style man pages Fortran source files for included modules. osx86 32-bit OpenMPI for local development osx86-64 compilers & tools osx86-64 mcmodel=small libs osx86-64 header files Re-distributable runtime libraries Documentation UNIX-style man pages Fortran source files for included modules. osx86-64 OpenMPI for local development

End-user Environment Settings on MacOS

Once software installation is complete, whenever you bring up a PGI command window by double-clicking on the PGI2012.terminal file, PGI compilers and tools are accessible and your environment is pre-initialized. You can, however, use the following information to initialize your Terminal shell manually for use of the PGI products. Each of the following commands assume this: 46

Chapter 5. Installations on Apple Mac OS X

The license file is in /opt/pgi/license.dat . The lmgrd license manager is running.

Make 32-bit compilers the default

The following commands make the 32-bit compilers the default. In bash, sh, or ksh, use these commands:
$ PGI=/opt/pgi; export PGI $ LM_LICENSE_FILE=$PGI/license.dat; export LM_LICENSE_FILE $ PATH=$PGI/osx86/12.10/bin:$PATH; export PATH

In csh, use these commands:

% setenv PGI /opt/pgi % setenv LM_LICENSE_FILE $PGI/license.dat % set path = ($PGI/osx86/12.10/bin $path)

Make 64-bit compilers the default

The following commands make the 64-bit PGI compilers and tools the default. In bash, sh, or ksh, use these commands:
$ PGI=/opt/pgi; export PGI $ LM_LICENSE_FILE=$PGI/license.dat; export LM_LICENSE_FILE $ PATH=$PGI/osx86-64/12.10/bin:$PATH; export PATH

In csh, use these commands:

% setenv PGI /opt/pgi % setenv LM_LICENSE_FILE $PGI/license.dat % set path = ($PGI/osx86-64/12.10/bin $path)

To use the local MPI that comes with PGI Workstation, use these commands: In bash, sh, or ksh, use this commands:
$ PATH=$PGI/osx86-64/12.10/mpi/openmpi/bin:$PATH $ export PATH

In csh, use this commands:

% set path = ($PGI/osx86-64/12.10/mpi/openmpi/bin $path)

47

48

Chapter 6. Installations on Microsoft Windows

This section describes how to install PGI Workstation on a system running a Microsoft Windows operating system. These instructions are valid for both 64-bit and 32-bit platforms, though supported platforms vary by product. Further, this installation information is applicable to both permanent and trial installations. For installations on 64-bit x64 systems running a 64-bit operating system, the PGI installer installs the 64-bit and 32-bit versions of the PGI compilers and tools. For installations on 32-bit x86 systems, the PGI installer installs only the 32-bit versions of the PGI compilers and tools.

Preparing to Install on Windows

PGI products for Windows include the Microsoft Open Tools, essential tools and libraries required to compile, link, and execute programs on Windows. No additional Microsoft tools or libraries are needed. The Microsoft Open Tools include a subset of the full Microsoft Platform SDK. PGI products can also compile and link against the Microsoft Platform SDK. For information about how to download the Platform SDK, visit http://msdn.microsoft.com/platformsdk.

Note
Verify you have enough free disk space. PGI software requires 750 MB of free disk space during the installation.

Installation Steps for Windows

Once you have prepared for the installation, follow these instructions to install the software:

Note
Administrator privileges are required to install PGI software.

49

Installation Steps for Windows

1.

Log in as Administrator. Download the software from www.pgroup.com or another electronic distribution site.

2.

Start the installation.

Note
Administrator privileges are required to install PGI software. If you obtained your software from PGI, run the installation executable file on the target machine. The installation executables are: pgiws-120.exe pgiwsx64-120.exe License Setup Tool: The installer runs the PGI Licensing Setup tool at the conclusion of the installation process. This tool automates steps three (3) through six (6) in this process. To use the PGI Licensing Setup tool, your computer must meet these requirements: o Be connected to the Internet. o Have Microsoft .NET Framework 2.0 or Microsoft .NET Framework 3.5 installed. o Have Internet Explorer Version 6.0 or higher installed and configured. If your computer does not meet these prerequisites, then you can either make any necessary changes to your system and run the PGI Licensing Setup tool later, or follow steps three through six in this process. 32-bit Windows 64-bit/32-bit Windows

Important
If you choose to run the PGI Licensing Setup tool later, you can find it in the PGI Workstation folder under the Start menu. When you run the program, the PGI Licensing Setup tool walks you through the license generation and installation process. It prompts you for your PGI username and password as well as the type of license you wish to install, such as a trial license or a permanent license. The tool also informs you of any problems it experiences with installation and provides instructions on how to proceed.

Note
If the PGI Licensing Setup tool reports a successful license installation, then skip to step 7. 3. Make PGI products accessible and prepare for licensing. Once software installation is complete, whenever you bring up a PGI command window by doubleleft-clicking on the PGI Workstation desktop icon, PGI compilers and tools are accessible and your environment is pre-initialized. 50

Chapter 6. Installations on Microsoft Windows

4.

Verify release number. Verify the release number of the products you have installed. Open PGI Workstation from your desktop by double-left-clicking the PGI icon and entering one of the following commands. The release number is in the first line displayed in the BASH shell window. For Fortran 77, use: For Fortran 95, use: For C++, use: For ANSI C, use: pgf77 -V x.f pgfortran -V x.f pgCC V x.cc pgcc -V x.c

Note
These commands can be successfully executed even if the files x.f or x.c do not exist and you have not completed the licensing phase of the installation. Use it to check that you have installed the proper version of the compilers and have initialized your environment to enable access to that version. 5. Generate and install license keys. All of the PGI compilers and tools are license-managed and require installation of license keys to make the PGI software operational. To obtain license keys, you need the following information: An account on the PGI website. You probably created this account when you downloaded the PGI software. If you purchased a license without creating an account, one was created for you when your order was processed. Please check for an activation e-mail from [email protected] . If you dont have an account, you can create one at: www.pgroup.com/register. The FlexNet hostid and hostname of the computer on which the software is installed. The installer echoes this information to your screen.

Note
After you have installed the PGI software, you can obtain your FlexNet hostid by doubleleft-clicking on the PGI Workstation desktop icon to open a PGI Workstation command window, and typing these commands:
PGI$ PGI$ cd $PGI cat license.info

You should see information similar to the following: 51

Installation Steps for Windows

For a permanent license, please read the order acknowledgment that you received. Connect to www.pgroup.com/login with the registered e-mail and password in your order acknowledgment.
FlexNet Host ID: 001234A98765 Installation: C:\Program Files\PGI\ PGI Release: 2012

You can also obtain evaluation license keys by logging in at www.pgroup.com/login with your existing PGI user account or by creating a new account if you have not previously registered. Generate License Keys Log in to your PGI web account at www.pgroup.com/login. You should see a screen similar to the following:

To generate permanent license keys: 1. Click Create permanent keys. 2. Click the PIN associated with the product for which you wish to generate license keys. If you dont see any PINs listed, you first need to tie one to your account. a. Obtain your PIN code from your original PGI order confirmation e-mail, in the section labeled: SHARING ADMINISTRATION. b. Click the link: Tie a PIN to this account. c. Follow the instructions provided. 3. Click License keys to generate the keys. To generate trial license keys: 1. Click Create trial keys. 2. Accept the terms of the agreement. 3. Enter the hostid exactly as it appears in the message that is displayed during installation or when you issue the command: 52

Chapter 6. Installations on Microsoft Windows

PGI$ PGI$

cd $PGI cat license.info

4. Click the Generate license key button. Install License Keys Once you have generated your trial or permanent license keys, cut and paste them into your license.dat file. In a typical configuration, where C:\ is the system drive and you installed the software using the default location, this file would be found in C:\Program Files\PGI \license.dat. If you have not previously received license keys from PGI, replace the contents of the license.dat file created during installation with the license keys you generated using the preceding steps. If your license.dat file already contains keys that you previously received from PGI, first make a copy of the existing license.dat file in case you encounter a problem with the new license. Then do one of the following: If the license keys in the file are for a previous release of the same product, overwrite the keys. If the license keys in the file are for different PGI products, append the new keys to the keys already in this file. 6. Start the PGI license server.

Note
If you are evaluating a PGI product using trial keys, skip to Step 7. You do not need to start the license server. The FlexNet license system requires that a license server be running. The installation process creates a Windows Service named PGI License Server. As soon as a valid license.dat file is in place, as described in Step 5, this service can be started. The PGI License Server is a Windows Service. To start it, follow these steps: 1. Open the Services dialog from the Start menu: Start | Control Panel | Administrative Tools | Services 2. Select PGI License Server. 3. Select Start, if the PGI service is stopped. If the PGI service is running, STOP and then START it. This process guarantees that the new PGI license is served and that the older, cached PGI license is no longer active.

Note
The PGI License Server service starts automatically on system reboot, provided that the license.dat file contains valid keys. 53

Customizing the Command Window

7.

Review documentation. You can view the online documentation by using any web browser to go to: www.pgroup.com/resources/docs.htm

Tip
You may want to bookmark this location for easy future reference to the online manuals. 8. Customize PGI Workstation Optionally, customize the setup, as described in the next sections, Customizing the Command Window and PGI Workstation Directory Structure.

Customizing the Command Window

By default, when you double-left-click on the PGI Workstation desktop icon, a standard black-background command window appears on your screen. This window is pre-initialized with environment and path settings for use of the PGI Workstation compilers and tools. If you prefer different background or text colors, font style, window size, or scrolling capability, you can customize the shortcut that creates the PGI Workstation command window. To customize your window, right-click the PGI Workstation desktop icon, and select Properties from the pop-up menu. In the PGI Workstation Properties dialog box, select the tabs for the features you want to customize, and make the desired modifications.

PGI Workstation Directory Structure

This section contains information about the directory structure that the installation process builds.

Default Installation Directories

The default installation directory depends on your platform. The following table lists the default installation directory by platform. Table 6.1. Default Windows Installation Directories by Platform Platform 32-bit 64-bit Default Installation Directory
%SYSTEMDRIVE%\Program Files\PGI\win32\12.10\ %SYSTEMDRIVE%\Program Files\PGI\win64\12.10\ %SYSTEMDRIVE%\Program Files (x86)\PGI\win32\12.10\

In addition to the product directories, the Microsoft Open Tools and, optionally, cygwin are installed here.
%SYSTEMDRIVE%\Program Files\PGI\Microsoft Open Tools 9 %SYSTEMDRIVE%\cygwin

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Chapter 6. Installations on Microsoft Windows

In release 11.2, the version of Cygwin shipped with PGI Workstation/Server on Windows was upgraded to Cygwin 1.7.7-1. This is the current version of Cygwin as of February, 2011. In general, PGI users should not notice significant differences in Cygwin behavior. However, there have been some changes from the previous version of Cygwin. For more information about the changes, visit the PGI User Forum topic: http://www.pgroup.com/userforum/viewtopic.php?t=2448&sid=6bba0fa561c67762f5e26353592b5303 For information about configuring and troubleshooting Cygwin, you can visit the following websites: Cygwin FAQ: http://cygwin.com/faq.html Cygwin Users Guide: http://cygwin.com/cygwin-ug-net.html Cygwin mailing lists and archives: http://cygwin.com/lists.html

PGI Workstation Directories on a 64-bit Windows System

The following directory structure is created during installation on a 64-bit system; here C is assumed to be the system drive. Table 6.2. 64-bit Windows Directory Structure Name of directory
C:\Program Files\PGI\win64\12.10\bin C:\Program Files (x86)\PGI\win32\12.10\bin C:\Program Files\PGI\win64\12.10\lib C:\Program Files (x86)\PGI\win32\12.10\lib C:\Program Files\PGI\win64\12.10\include C:\Program Files (x86)\PGI\win32\12.10\include C:\Program Files\PGI\win64\12.10\REDIST C:\Program Files (x86)\PGI\win32\12.10\REDIST C:\Program Files\PGI\win64\12.10\doc C:\Program Files (x86)\PGI\win32\12.10\doc C:\Program Files\PGI\win64\12.10\man C:\Program Files (x86)\PGI\win32\12.10\man C:\Program Files\PGI\Microsoft Open Tools 9 C:\cygwin

Contents 64-bit compilers and tools binaries 64-bit runtime and support libraries 64-bit header files Re-distributable runtime libraries Documentation Man pages for commands Microsoft tools Cygwin tools

PGI Workstation Directories on a 32-bit Windows System

The following directory structure is created during installation on a 32-bit system. Here C is assumed to be the system drive.

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LM_LICENSE_FILE and FLEXLM_BATCH

Table 6.3. 32-bit Windows Directory Structure Name of directory

C:\Program Files\PGI\win32\12.10\bin

Contents 32-bit compilers and tools binaries 32-bit runtime and support libraries 32-bit header files Re-distributable runtime libraries Documentation Man pages for commands Microsoft tools Cygwin tools

C:\Program Files\PGI\win32\12.10\lib

C:\Program Files\PGI\win32\12.10\include C:\Program Files (x86)\PGI\win32\12.10\REDIST

C:\Program Files\PGI\win32\12.10\doc C:\Program Files\PGI\win32\12.10\man C:\Program Files\PGI\Microsoft Open Tools 9 C:\cygwin

LM_LICENSE_FILE and FLEXLM_BATCH

This section describes two environment variables that you can use with FlexNet: LM_LICENSE_FILE FLEXLM_BATCH

LM_LICENSE_FILE
The system environment variable LM_LICENSE_FILE is not required by PGI products on Windows but you can use it to override the default location that is searched for the license.dat file. To use the system environment variable LM_LICENSE_FILE, set it to the full path of the license keys file. To do this, follow these steps: 1. Open the System Properties dialog (Start | Control Panel | System). 2. Select the Advanced tab. 3. Click the Environment Variables button. If LM_LICENSE_FILE is not already an environment variable, create a new system variable for it. Set its value to the full path, including the name of the file, for the license keys file. If LM_LICENSE_FILE already exists as an environment variable, append the path to the license file to the variables current value using a semi-colon to separate entries.

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Chapter 6. Installations on Microsoft Windows

FLEXLM_BATCH
By default, on Windows, the license server generates interactive pop-up messages to issue warning and errors. This behavior is controlled by the environment variable FLEXLM_BATCH. Although it is not recommended, you can prevent interactive pop-ups from appearing. To do this, set the environment variable FLEXLM_BATCH to the value of 1.

Windows Firewall and PGI Debugging

Microsoft Windows Firewall runs by default on some types of systems, such as Windows XP and Windows Vista. Suppose this application is running on your system. Unless the PGI debugger is included in the Windows Firewall Exceptions list, Windows Firewall may try to block the PGI debugger engine when you debug a program.

Automatic Additions to Windows Firewall Exceptions List

When PGI software is installed If Windows Firewall is enabled when PGI software is installed, certain components are automatically added to the Exceptions list. These components appear as follows: PGI Debugger 2012 (32-bit) PGI Debugger 2012 (64-bit) - not added to the Exceptions list on 32-bit systems. When PGI software is uninstalled If Windows Firewall is enabled when PGI software is uninstalled, the components previously listed are automatically removed from the Exceptions list. When using PGDBG to Debug If PGDBG is not listed in the Exceptions list and Windows Firewall is enabled when you use PGDBG to debug, the Firewall displays a dialog that allows you to Unblock the application named pgdebug. If you choose the Unblock option, Windows Firewall adds the debugger (pgdebug) to its list of Exceptions and you do not see the pop-up dialog again unless you reinstall.

Tip
On rare occasions, this pop-up may prevent the debug session from starting correctly. If this occurs, use the Task Manager to end the debug session.

Note
You can manually add these components to the Windows Firewall list of Exceptions.

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Common Windows Installation Problems

Common Windows Installation Problems

The most common installation problems on Windows are related to licensing. To troubleshoot your installation, first check that the license.dat file you are using contains valid license keys. Second, check that the PGI License Server, a Windows Service, has been started. Typical FlexNet errors encountered may include the following: When using a PGI compiler or tool, a FlexNet License Manager dialog appears that states: LICENSE
MANAGER PROBLEM: No such feature exists.

This message may appear because the license.dat file accessed by the FlexNet License Manager does not contain valid license keys. When using a PGI compiler or tool, you may see one of the following FlexNet License Manager dialog messages: LICENSE MANAGER PROBLEM: Cannot connect to license server system. or LICENSE MANAGER PROBLEM: Failed to checkout license This message may appear due to one of the following: The PGI License Server is not running. Firewall problems exist. The Hostname in the license is not one the license server can find successfully. This hostname must map to the IP address of the server. When starting the PGI License Server, a system message appears that states The PGI License Server service on Local Computer started and then stopped. Some services stop automatically if they have no work to do, for example, the Performance Logs and Alerts service. This message may appear because the license.dat file accessed by the FlexNet License Manager does not contain valid license keys. You may see the following message: This message may appear because the PGI License Server has not been started. By default, on Windows, the license server generates interactive pop-up messages to issue warning and errors. You can use the environment variable FLEXLM_BATCH to prevent interactive pop-up windows. To do this, set the environment variable FLEXLM_BATCH to 1. For assistance with difficulties related to the installation, send e-mail to [email protected].

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Chapter 7. Contact Information

You can contact The Portland Group at: The Portland Group STMicroelectronics, Inc. Two Centerpointe Drive, Suite 320 Lake Oswego, OR 97035 USA Or electronically using any of the following means: Fax Sales Support WWW +1-503-682-2637 [email protected] [email protected] www.pgroup.com

The PGI User Forum is monitored by members of the PGI engineering and support teams as well as other PGI customers. The forum newsgroups may contain answers to commonly asked questions. Log in to the PGI website to access the forum:
www.pgroup.com/userforum/index.php

Many questions and problems can be resolved by following instructions and the information available at our frequently asked questions (FAQ) site:
www.pgroup.com/support/faq.htm

All technical support is by e-mail or submissions using an online form at www.pgroup.com/support. Phone support is not currently available. PGI documentation is available at www.pgroup.com/resources/docs.htm or in your local copy of the documentation in the release directory doc/index.htm.

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