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Microscopy, Micrometry and Cell Counting

The document describes experiments involving microscopy, micrometry, and cell counting. Micrometry is defined as determining the exact size of an object under a microscope. Cell counting involves manually determining cell density in a cell suspension. The experiments performed calibration of the microscope using a stage micrometer and obtained the calibration constant. Cell concentrations of HCT116 and BJAB cell lines were determined using a hematocytometer and trypan blue exclusion method. Results of viability assays on the cell lines are also reported.

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Aaron Macauyag
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0% found this document useful (0 votes)
71 views

Microscopy, Micrometry and Cell Counting

The document describes experiments involving microscopy, micrometry, and cell counting. Micrometry is defined as determining the exact size of an object under a microscope. Cell counting involves manually determining cell density in a cell suspension. The experiments performed calibration of the microscope using a stage micrometer and obtained the calibration constant. Cell concentrations of HCT116 and BJAB cell lines were determined using a hematocytometer and trypan blue exclusion method. Results of viability assays on the cell lines are also reported.

Uploaded by

Aaron Macauyag
Copyright
© Attribution Non-Commercial (BY-NC)
We take content rights seriously. If you suspect this is your content, claim it here.
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Download as DOC, PDF, TXT or read online on Scribd
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Microscopy, Micrometry and Cell Counting

D. Banaag[1], T. Justo[1], E.A. Macauyag[2], J, Talavera[1]


[1]INSTITUTE OF BIOLOGY; [2]INSTITUTE OF CHEMISTRY, COLLEGE OF SCIENCE UNIVERSITY OF THE PHILIPPINES, DILIMAN, QUEZON CITY, PHILIPPINES

DATE PERFORMED !over"#er 1$ an% 2&, 2&1' (!)TR*+TOR,) !AME Maan De -u."an ABSTRACT Thi !"#!$i%!&' () *+&,-*'!, '+ !"#.+$! 'h! 'h!+$i! )&, %!*h)&i % /!hi&, .i0h' %i*$+ *+#1 ) (!.. ) '+ -&,!$ ')&, )&, #!$2+$% '(+ /) i* %!'h+, &)%!.1 Mi*$+%!'$1 )&, C!.. C+-&'i&0 'h)' $!3-i$! i' - )0!4 I& Mi*$+%!'$1, ) S!) U$*hi& E%/$1+5 Si6! i ,!'!$%i&!, '+ /! 78489% (hi*h h) ) :4;;< ,i22!$!&*! 2$+% 'h! .i'!$)'-$! =).-! (hi*h i >? 9% 2+$ )& !%/$1+ )' 'h! ; *!.. *.!)=)0! ')0!4 F+-$ C+$&!$ S3-)$! M!'h+, i !%#.+1!, i& 'h! C!.. C+-&'i&0 P)$' - i&0 ) H!%+*1'+%!'!$4 Th! $-.i&0 )&, 'h! *!.. (h!$! -**! 2-..1 !!& )&, Th! C!.. *+&*!&'$)'i+& +2 '(+ )%#.! +2 HCT@11A, ) '1#! +2 *+.+& *)&*!$ *!.., () ,!'!$%i&!, '+ /! 148B"1?B 2+$ 'h! 2i$ ' +&! )&, >487"1?B 2+$ 'h! !*+&, +&!4 Th! =i)/i.i'1 ) )1 - i&0 T$1#h)& /.-! ) ) ')i& 2+$ &+&@ =i)/.! *!.. () )/.! '+ ,i22!$!&'i)'! =i)/.! *!.. 2$+% &+&@=i)/.! *!.. )&, 'h! P!$*!&' Vi)/.! *!.. +2 'h! )%#.! )$! ,!'!$%i&!, '+ /! 7747< )&, :A4?<, *.) i21i&0 'h!% ) -&,!$0+i&0 'h$+-0h ) 0$+(i&0 #h) ! Introduction T/e angular an% s0at1al resolut1on o2 t/e 3u"an !a4e% eye 1s a#out &.&1 %egrees an% &.&25"" res0ect1vely, 61t/ a co"2orta#le v1e61ng %1stance o2 a#out 1$c". Because o2 t/1s l1"1tat1on, 6e a%/ere to 1nstru"ents 6/1c/ 1"0rove our a#1l1ty to o#serve 7 t/e earl1est one #e1ng t/e 81g/t M1crosco0e. T/1s #rea4t/roug/ 1s a 0ro%uct o2 t/e %1scovery an% a00l1cat1on o2 O0t1cs. )1nce t/en, 1t /as greatly 1"0rove% our un%erstan%1ng o2 t/e #as1c un1t o2 l12e 7 t/e cell. (n t/1s e90er1"ent, t6o #as1c "et/o%s o2 "1crosco0y 1s e90lore%. T/e 21rst one #e1ng M1cro"etry 6/1c/ 1s t/e %eter"1nat1on o2 t/e e9act s1.e o2 an o#:ect un%er a "1crosco0e an% +ell +ount1ng, t/e "anual %eter"1nat1on o2 cell %ens1ty 1n a cell sus0ens1on. Materials and Methods Focusing through a microscope ;/en t/e 0re0are% sl1%e 6as "ounte% onto t/e stage, t/e l1g/t "1crosco0e 6as 2ocuse% us1ng t/e lo6 0o6er o#:ect1ve 61t/ a 1&9 "agn121cat1on. T/1s 6as %one #y turn1ng u0 t/e l1g/t, o0en1ng t/e %1a0/rag", sett1ng t/e con%enser all t/e 6ay u0, an% a%:ust1ng t/e coarse a%:ust"ent 4no# an% 21ne a%:ust"ent 4no# unt1l a clear 1"age 6as v1e6e% t/roug/ t/e eye01ece. Adjusting for phase contrast P/ase contrast 1s a tec/n1<ue use% 1n "1crosco0y to "a91"1.e t/e contrast 6/en t/ere 1s a #r1g/t 21el% so t/e 1"age 0ro%uce% 1s clearer. (n or%er to a%:ust t/e l1g/t "1crosco0e 2or 0/ase contrast, a s0ec1al con%enser 61t/ %122erent annular r1ng %1a0/rag"s 6as use%. Also, t/e eye01ece 6as re0lace% 61t/ a center1ng telesco0e 1n or%er to 0ro0erly see t/e annular r1ng o2 t/e

con%enser. Once v1e6e%, a l1g/t an% %ar4 r1ng 6as seen t/roug/ t/e center1ng telesco0e. T/1s 6as %ue to t/e 1nter0lay o2 l1g/t 0ass1ng t/roug/ t/e con%enser an% t/e retar%at1on o2 l1g/t t/roug/ t/e o#:ect1ve. T/ese t6o r1ngs 6ere cal1#rate% us1ng t/e center1ng scre6s an% 6as "a%e to ecl10se suc/ t/at only a r1ng 6as v1e6e% t/roug/ t/e center1ng telesco0e. ;/en t/1s 6as %one, t/e center1ng telesco0e 6as re0lace% #ac4 61t/ t/e ocular lens. T/e "1crosco0e 6as t/en use% 2or 0/ase contrast. Getting the calibration constant

F1gure 2. For"ula 2or +al1#rat1on +onstant T/e stage "1cro"eter /as 1&& %1v1s1ons an% t/e total lengt/ 1s 1 "1ll1"eter, t/us eac/ %1v1s1on 1s e<u1valent to 1& "1cro"eters or &.&1 "" 0er )MD >Argayosa @ De -u."an, 2&1'?. Cell counting in culture media and viability assay

F1gure 1. Al1gn"ent o2 t/e eye01ece "1cro"eter an% stage "1cro"eter =no61ng t/e cal1#rat1on constant 1s 1"0ortant 2or any eye01ece "1cro"eter use% s1nce s0ec1"ens can #e accurately "easure% 61t/ 1t. -ett1ng t/e cal1#rat1on constant 6as %one 61t/ t/e use o2 t/e eye01ece "1cro"eter >EM? to #e cal1#rate% an% a stage "1cro"eter >)M? use% to cal1#rate t/e EM. T/e )M 6as "ounte% on t/e stage, v1e6e% 61t/ t/e eye01ece, 2ocuse% 61t/ t/e a%:ust"ent 4no#s an% "a%e to al1gn 61t/ t/e EM suc/ t/at at least t6o l1nes co1nc1%e 61t/ eac/ ot/er. T/e v1e6 un%er t/e "1crosco0e loo4e% l14e t/at o2 F1gure 1. A2ter 6/1c/, t/e nu"#er o2 stage "1cro"eter %1v1s1ons >)MD? an% eye01ece "1cro"eter %1v1s1ons >EMD? 6as counte% 2ro" t/e 0o1nt at 6/1c/ t/e l1nes 2ro" #ot/ "1cro"eters co1nc1%e to t/e ot/er 0o1nt 6/ere t/ey al1gn. T/ree tr1als 6ere %one 2or t/1s, us1ng %122erent 0o1nts o2 al1gn"ent 2or eac/ tr1al. A2ter t/e ' )MDs 61t/ t/e1r corres0on%1ng EMDs 6ere o#ta1ne%, t/e cal1#rat1on constant 6as co"0ute% us1ng t/e 2or"ula g1ven #elo6

F1gure '. A /e"atocyto"eter T/e cell concentrat1on o2 3+TA115, a ty0e o2 colon cancer cell, 6as %eter"1ne% us1ng a /e"atocyto"eter, a ty0e o2 count1ng c/a"#er 61%ely use% 2or cell count1ng. T/e /e"atocyto"eter conta1ns gr1%s an% <ua%rants "a41ng 1t eas1er to count cells 6/en 1t 1s "ounte% un%er t/e l1g/t "1crosco0e. 8ess t/an 1$Bl o2 t/e cell sa"0le 6as ta4en an% "ounte% onto t/e /e"atocyto"eter us1ng ca01llary act1on 61t/ a cover sl10 0lace% on to0 o2 1t. T/e "et/o% use% 1n count1ng t/e cells 6as t/e 2our corner s<uare "et/o%. T/1s 6as %one #y count1ng t/e nu"#er o2 cells 0resent 61t/1n 1n eac/ o2 t/e 2our <ua%rants o2 t/e /e"atocyto"eter seen 1n F1gure 2. T/e cells C$D a#ove 61t/1n t/e #oun%ary o2 t/e <ua%rant 6as counte%. A2ter o#ta1n1ng t/e nu"#er o2 cells 2or eac/ <ua%rant, t/e average value 6as co"0ute% an% use% 2or t/e 2or"ula #elo6 >to co"0ute 2or t/e cell concentrat1on 7 cellE"l?

F1gure F. For"ula 2or +ell +oncentrat1on T/e %1lut1on 2actor >DF? 6as co"0ute% #y gett1ng t/e 21nal volu"e o2 %1lute% solut1on over t/e al1<uot ta4en 2ro" t/e stoc4 solut1on. T/1s 1s use% only 12 t/e stoc4 solut1on 6as %1lute%, 12 not, t/en DF G 1. For t/e v1a#1l1ty assay, t/e cell sa"0le use% 6as BAJCCFA.1, a ty0e o2 "ur1ne "acro0/age. T/e %ye e9clus1on "et/o% 6as e"0loye% 6/ere1n try0to0/an #lue 6as use% to %eter"1ne nonAv1a#le cells 6/1c/ 6ere sta1ne% #lue. T/e sus0ens1on 6as 0re0are% 61t/ a 1 2 rat1o 2or try0to0/an #lue an% t/e cell sa"0le res0ect1vely. A00ro91"ately, 5&Bl o2 try0to0/an #lue 6as a%%e% to 12&Bl o2 t/e cell sa"0le, result1ng 1n a DF e<ual to 1.$. T/e "et/o% e"0loye% 2or cell count1ng 1s t/e sa"e as t/e 0rev1ous one "ent1one%. 3o6ever, t/e count1ng o2 cells 6as se0arate% 1nto t6o grou0s, v1a#le an% nonA v1a#le. A2ter6ar%s, t/e overall cell concentrat1on 6as co"0ute%, along 61t/ D v1a#le cellsE"l an% D nonAv1a#le cellsE"l. T/e gro6t/ curve stage 6as also recor%e% 1n t/e results. (t 1s 0$+(i&0 12 t/e 0ercentage o2 v1a#le cells 1s /1g/er t/an t/e 0ercentage o2 nonAv1a#le cells, ,1i&0 12 1t 1s t/e o00os1te an% ')'i+&)$1 12 t/e t6o values are e<ual. RESULTS Microscopy O#:ect1ves use% 1n t/e "agn121cat1on o2 sa"0le s0ec1"ens are 1nscr1#e% 61t/ a ser1es o2 letters an% nu"#ers 6/1c/ 1n%1cate t/e #as1c 0ro0ert1es o2 t/e lens >Dav1%son, 2&1'?. T/ese 1nscr10t1ons 1nclu%e% P/2 !EOF8*AR F&E&.C$ 15&E&.1C P/2 F&E&5$ 15&E&.1C P8A! 15E&.'$ 15&E&.1C P8A! 1&&E1.2$ Oel 15&EA

T/ese 1nscr10t1ons 0rov1%e t/e #as1c c/aracter1st1cs o2 t/e o#:ect1ve to #e use% accor%1ng to t/e nee%s o2 t/e "1crosco01c tec/n1<ue an% t/e "1crosco0e 1tsel2. Annular r1ng %1a0/rag"s >F1g.1? o2 t/e P/ase contrast "1crosco0e s1"1larly 1n%1cate t/e s0ec121c 0ur0oses an% 2unct1on o2 eac/ o#:ect1ve.

F1gure $. Annular r1ng %1a0/rag"s o2 t/e 0/ase contrst "1crosco0e. >A? >B? >+? Micrometry T/ree tr1als 6ere %one 1n t/e co"0utat1on o2 t/e cal1#rat1on constant o2 t/e "1cro"eter eye01ece. T/e average cal1#rat1on constant 1s &.&15C M1l1"eters 0er Eye P1ece M1cro"eter D1v1s1on >""E e"%? . (n t/1s l1g/t, #e1ng o#serve% o2 /av1ng a %1a"eter o2 $e"%, un%er t/e "1crosco0e, t/e co"0ute% cell %1a"eter 6as &.&H''"" >H'.'I"?. Assu"1ng t/at an 1"age o2 t/e cell /av1ng a %1a"eter o2 $c" 1s seen 2ro" t/e "1crosco0e, t/e "agn121cat1on o2 t/e s0ec1"en 6as 5&&9. Hemocytometry and ia!ility Assay +olon cancer cells 6ere use% 1n t/e /e"ocyto"etry count. T6o cultures o2 "ur1ne "acro0/ages >JCCFA.1? la#ele% as 2las4s B an% + 6ere teste% 2or t/e1r total cell concentrat1on an% 0ercentage o2 v1a#le cells. Ta#le 1. Results o2 +ell +ount1ng Flas4 B Flas4 + +oncentrat1on 1.'$91&$ J.'H91&$ >cellsEMl? Percentage o2 HH.HD C5.&D K1a#le +ells

-ro6t/ curve -ro61ng )tage )tage

-ro61ng )tage

(n #ot/ 2las4s, t/e 0ercentage o2 v1a#le cells 1s /1g/er t/an t/e nonAv1a#le cells. T/1s 1n%1cates t/at #ot/ o2 t/e sa"0les are 1n t/e -ro61ng stage #ecause "ore cells are al1ve t/an %ea%. "ISCUSSI#$ Microscopy M1crosco0es use a t6oAlens syste" t/e o#:ect1ve lens syste" >3PO, 8PO an% O(O? /av1ng a "agn121cat1on o2 F&9, FA1&9 an% 1&&9 res0ect1vely an% t/e ocular lens syste" /av1ng a "agn121cat1on o2 a#out 1&9. T/e total "agn121cat1on o2 t/e 1"age 1n t/e "1crosco0e 1s o#ta1ne% 2ro" t/e 0ro%uct o2 #ot/. T/e 1"age as 1t 1s enlarge% 1s 1nverte%. T/1s 1s #ecause t/e "1crosco0e, s0ec121cally t/e o#:ect1ve 2or"s a real 1"age t/roug/ a conve9 lens. T/1s 1s s/o6n 1n t/e 21gure #elo6.

to %1verge 2ro" a 0o1nt on t/e sa"e s1%e o2 t/e lens as t/e o#:ect >t/1s 1s t/e locat1on o2 t/e v1rtual 1"age?. T/e a#1l1ty o2 t/e "1crosco0e to 0rov1%e a large an% %eta1le% 1"age o2 a sa"0le 1s #ase% on t/e conce0ts o2 "agn121cat1on an% resolut1on. Magn121cat1on 1s t/e a#1l1ty o2 t/e "1crosco0e to enlarge t/e 1"age o2 t/e s0ec1"en 6/1le resolut1on re2ers to t/e 1ts a#1l1ty to %1st1ngu1s/ t6o 0o1nts as %1st1nct o#:ects >Talaro, 2&&H?. T/e l1"1t o2 resolut1on %eter"1nes t/e resolv1ng 0o6er o2 t/e "1crosco0e an% 1s calculate% us1ng t/e A##e e<uat1on 8.R G &.51L E !.A 6/ere L 0erta1ns to t/e 6avelengt/ o2 l1g/t 0ass1ng t/roug/ t/e s0ec1"en 1n nano"eters an% !.A. or t/e nu"er1cal a0erture. T/e nu"er1cal a0erture "easures t/e a#1l1ty an% e221c1ency o2 t/e lens to #en% l1g/t rays. (t 1s e<ual to ns1n>a? 6/ere n 1s re2ract1ve 1n%e9 >nGcEv? an% a as M o2 t/e angle o2 1nco"1ng l1g/t. T/e value o2 s1n>a? never #eco"es larger t/an 1. T/ere2ore to 1ncrease resolut1on, t/e "ater1al #et6een t/e sa"0le an% t/e o#:ect1ve "ust #e c/ange% as to 1ncrease t/e re2ract1ve 1n%e9. T/1s 1s t/e reason 6/y o1l 1s a00l1e% to O1l (""ers1on O#:ect1ves an% co0e 61t/ t/e "agn121cat1on #roug/t #y 1t. Manu2acturers o2 "1crosco0es 0rov1%e t/e c/aracter1st1cs o2 t/e o#:ect1ves nee%e% 1n e90er1"ents #y "eans o2 1nscr1#1ng a ser1es o2 letters an% nu"#ers on t/e sur2ace >Dav1%son, 2&1'?. T/ese 1n2or"at1on a1%s t/e stu%ents an% sc1ent1sts al14e 1n c/oos1ng t/e a00ro0r1ate o#:ect1ves 2or t/e1r stu%y. Ty01cally, t/e na"e o2 t/e "anu2acturer 0rece%es all ot/er 1n2or"at1on >at t/e to0"ost?. O0t1cal correct1ons are also 1n%1cate%. F1el% curvature correct1ons "ay #e re0resente% #y P8A! >Flat 21el% o0t1cal correct1on? or !EOF8*AR >Fluor1te a#errat1on correct1on? >Dav1%son, 2&1'?. T/e ty0e o2 "1crosco0e t/e o#:ect1ves are a00ro0r1ate 2or are 1n%1cate% #y a##rev1at1ons as 6ell >e.g D 2or Dar421el%?. T/e 1nscr10t1on P/2 re2ers to P/ase

F1gure 5. For"at1on o2 Real (nverte% ("age #y t/e O#:ect1ve lens T/e eye01ece lens t/en acts as a "agn12y1ng glass an% "agn121es t/e 1"age 2or"e%. A real 1"age 1s 2or"e% 6/en l1g/t rays or1g1nat1ng 2ro" a 0o1nt on one s1%e o2 a lens >1.e. t/e o#:ect? are re2racte% #y t/e lens so t/at t/ey 2ocus >co"e toget/er? to a 0o1nt on t/e ot/er s1%e o2 t/e lens at t/e 1"age locat1on 6/1le a v1rtual 1"age 1s 2or"e% 6/en l1g/t rays or1g1nat1ng 2ro" a 0o1nt on one s1%e o2 a lens >1.e. t/e o#:ect? are re2racte% #y t/e lens so t/at t/ey %1verge >"ove a0art 2ro" eac/ ot/er? on t/e ot/er s1%e o2 t/e lens. ;/en t/ese rays are trace% #ac4 1n a stra1g/t l1ne >1gnor1ng t/at t/ey 6ere actually #ent #y t/e lens? t/en a00ear

con%enser annulus an% Oel "eans O1l 1""ers1on >Dav1%son, 2&1'?. T/e nu"#ers #elo6 t/e "ent1one% 1nscr10t1ons re0resent 2urt/er "ec/an1cal c/aracter1st1cs an% %eta1ls. T/e 21rst nu"#ers %1v1%e% #y a slas/ re0resent t/e lateral "agn121cat1on >r1g/t? an% nu"er1cal a0erture >le2t?. T/at 1s, an 1nscr10t1on 1&&E1.2$ "eans t/at t/e o#:ect1ve /as a lateral "agn121cat1on o2 1&&9 an% a nu"er1cal a0erture o2 1.2$. T/e ne9t set o2 nu"#ers s1"1larly %1v1%e% #y a slas/ re0resent t/e tu#e lengt/ >r1g/t? an% t/e 6or41ng %1stance >le2t? >Dav1%son, 2&1'?.A0art 2ro" t/e tec/1n1cal 0ro0ert1es o2 t/e o#:ect1ve lenses, lenses "ay 0resent certa1n a#errat1ons 6/1c/ "ay #e e1t/er c/ro"at1c or s0/er1cal ones. +/ro"at1c a#errat1ons result 2ro" t/e lenses t/at act as 0r1s"s an% /ence result to 1"ages 61t/ color 2r1nges aroun%. )0/er1cal a#errat1ons 0ro%uce 1"ages t/at a00ear curve% an% 2u..y 1nstea% o2 #e1ng l1near or 2lat >Breg"an, 1JJ5?. ("ages seen un%er t/e "1crosco0e are not al6ays 61t/ t/e1r #est <ual1ty 0oss1#le. +r1t1cal 1llu"1nat1on 1s l1"1te% #y t/e 2or"at1on o2 an 1"age o2 t/e l1g/t source 1n t/e s0ec1"en 1"age 0lane. T/1s 1s a%%resse% #y =N/ler 1llu"1nat1on #y ensur1ng t/e 1"age o2 t/e l1g/t source 1s 0er2ectly %e2ocuse% 1n t/e sa"0le 0lane an% 1ts con:ugate 1"age 0lanes. =N/ler 1llu"1nat1on re<u1res several o0t1cal co"0onents to 2unct1on +ollector lens an%Eor 21el% lens, F1el% %1a0/rag", +on%enser %1a0/rag" an% +on%enser lens. T/ese co"0onents l1e 1n t/1s or%er #et6een t/e l1g/t source an% t/e s0ec1"en an% control t/e 1llu"1nat1on o2 t/e s0ec1"en. T/e collectorE21el% lenses act to collect l1g/t 2ro" t/e l1g/t source an% 2ocus 1t at t/e 0lane o2 t/e con%enser %1a0/rag". T/e con%enser lens acts to 0ro:ect t/1s l1g/t, 61t/out 2ocus1ng 1t, t/roug/ t/e sa"0le. T/e 2ocus an% central c/aracter1st1cs o2 t/e 1"ages 1n l1g/t "1crosco0y "ay #e o2 t6o ty0es 0ar2ocal or 0arcentral >Rac46oo%@3arr1s >e%?, 1JJ5?. Par2ocal 1n%1cates t/at u0on c/ang1ng 2ro" one o#:ect1ve to anot/er, t/e 2ocus %oes not

c/ange an% /ence sl1g/t tun1ng o2 t/e 21ne a%:ust"ent 1s only nee%e%. On t/e ot/er /an%, 1n Parcentral, 1t 1s t/e center o2 t/e 21el% t/at %oes not c/ange 6/en t/e o#:ect1ves are c/ange% >Breg"an, 1JJ5?. M1crosco0es use% 2or 0/ase contrast "1crosco0y are e<u100e% 61t/ con%enser annulus an% 0/ase 0late. T/e con%enser annulus 2ocuses t/e l1g/t 1nto t/e s0ec1"en. Due to t/e result1ng /ollo6 l1g/t 2ro" t/e con%enser annulus, t/e 6avelengt/ o2 %122racte% an% un%122racte% l1g/t 1s %122erent1ate%. D122racte% l1g/t 1s slo6er t/an t/e un%122racte% l1g/t. T/e /u"an eye can not %etect suc/ %122erence 1n 6avelengt/. T/e 0/ase 0late t/en "agn121es t/e %122erence 1n l1g/t 6avelengt/ an% 1s %etecte% #y t/e eye as a contraste% 1"age. T/e 0/ase 0late /as s1lver coat1ng an% glass lens t/1nner t/an t/e o#:ect1ve lens t/at allo6s t/e un%122racte% l1g/t to 0ass 2aster t/an t/e %122racte% l1g/t. >Tr1#e et al., 1JC$? T/e con%enser annulus an% 0/ase 0late 6or4s toget/er to 1ncrease t/e %122erence 1n 6avelengt/ o2 %122racte% an% un%122racte% l1g/t t/at 1s %etecte% as a contrast 1"age #y t/e eye. T/e o0t1cal 0at/ 2or #r1g/t 21el% , %ar4 21el% an% 0/ase contrast "1crosco0y are s/o6n #elo6

F1gure C. >Fro" le2t to r1g/t? 81g/t Pat/s o2 Br1g/t F1el%, Dar4 F1el% an% P/ase +ontrast M1crosco0e

Micrometry

A sea urc/1n e"#ryo 1n t/e FAstage cleavage 1s a00ro91"ately J&I" 1n %1a"eter >-1l#ert, 2&&&?. T/1s value 1s close to t/e "easure"ent calculate% 1n t/e e90er1"ent >H'.' I"? 6/1c/ "ay re2lect an accurate cal1#rat1on o2 t/e o#:ect1ves. M1cro"etry serves to #e a s1gn121cant an% 1n%1s0ensa#le tool 1n t/e c/aracter1.at1on o2 cells an% ot/er l1v1ng "1croorgan1s"s. Hemocytometry and %ia!ility assay T/e <uant121cat1on o2 cells 1n a cell sus0ens1on can #e %one %1rectly 1n a "1crosco0e t/roug/ t/e use o2 count1ng c/a"#ers l14e t/e /e"ocyto"eter. T/e /e"ocyto"eter /as a count1ng area "ar4e% 61t/ gr1% an% o2 4no6n %1"ens1ons >-allag/er an% ;1ley, 2&&$?. +oversl10s use% 2or "ount1ng on /e"ocyto"eters are es0ec1ally "a%e to #e t/1c4er t/an t/e convent1onal "1crosco0y coversl10s #ecause t/ey "ust #e a#le to overco"e t/e sur2ace tens1on o2 a %ro0 o2 l1<u1% >-r1goryev, 2&&'?. )a"0les "ove to t/e count1ng c/a"#er t/oug/ ca01llary act1on. De0en%1ng on t/e s1.e o2 t/e target organ1s", %eter"1nat1on o2 t/e nu"#er o2 cells 2ollo6 t/e centralAs<uare rule 2or s"all cells 6/1le t/e 2ourAcorner s<uare "et/o% 1s e"0loye% 1n largeAs1.e% cells l14e t/e "ur1ne "acro0/ages. Total cell count, as 0er2or"e% 1n t/e colon cancer cells, 0rov1%es t/e nu"#er o2 all cells 61t/out %1st1nct1on #et6een v1a#le an% nonAv1a#le cells. >3ogg, 2&&$? To %1st1ngu1s/ l1ve 2ro" %ea% cells, a v1a#1l1ty assay 6as 0er2or"e% us1ng try0an #lue as an e9clus1on %ye. Try0an #lue 1s e9clus1on test 1s a ra01%, s1"0le an% 1se% 1ne90ens1ve "et/o%. T/e co"0ro"1se% "e"#rane 1ntegr1ty o2 nonAv1a#le cells allo6 t/e u0ta4e o2 t/e %ye t/us %ea% cells a00ear as #lue. K1a#le cells a00ear clear or unsta1ne%. >8ongoA)or#elloet al., 2&&5? T/e 0ercentage o2 v1a#le an% nonAv1a#le cells %eter"1ne% t/e gro6t/ curve stage o2 t/e cells. T/e /1g/er 0ercentage o2 t/e v1a#le cells versus t/e nonAv1a#le cells suggests t/at t/e cells are 1n t/e log 0/ase o2 t/e curve gro6t/.

(n a%%1t1on to /e"ocyto"etry, ot/er "et/o%s 2or t/e %eter"1nat1on o2 cell %ens1ty 1nclu%e tur#1%1"etr1c "et/o%, 2lo6 cyto"etry an% 0la<ue assay "et/o%. (n tur#1%1"etr1c "et/o%, tur#1%1ty 1s "easure% t/roug/ t/e use o2 s0ectro0/oto"eter or tur#1%1"eter. +ell concentrat1on 1s t/en %eter"1ne% #y correlat1ng t/e o#serve% tur#1%1ty an% cell nu"#er. A "ore tur#1% sa"0les "eans /1g/er cell %ens1ty. Anot/er "et/o% 2or cell %ens1ty %etect1on 1s 2lo6 cyto"etry. T/e e"1tte% 2luoresence an% l1g/t scatter 1s %etecte% as t/e cells 2lo6 1n a s1ngleA21le "anner t/roug/ a 2ocuse% laser l1g/t. T/e recor%e% l1g/t 0ulse 1s converte% to an electr1cal s1gnal #y a 0/oto%1o%e or 0/oto"ult10l1er. An est1"ate o2 t/e total nu"#er o2 cells 1s correlate% 61t/ t/e cell count o#ta1ne% a2ter a 219e% t1"e 0er1o% 2or 2lo6. 8astly, t/e 0la<ue assay "et/o% ut1l1.es ser1al %1lut1on o2 cell sus0ens1on , usually v1ral, gro6n 1n a "onoloyer o2 /ost cell culture. Eac/ un1t o2 t/e sus0ens1on "a4es one 0la<ue. Pla<ues are local1.e% 1n2ecte% an% %ea% cells e9a"1ne% an% enu"erate% #y sta1n1ng t/e cell "onolayers. >-ol%"an an% -reen, 2&&J? RE&ERE$CES [1] Dav1%son M;. 2&1'. M1crosco0e o#:ect1ve s0ec121cat1ons. MicroscopyU' Source o( Microscopy Education. Retr1eve% 2ro" /tt0 EE666."1crosco0yu.co"Eart1clesEo0t1cs Eo#:ect1ves0ecs./t"l 2$ !ove"#er 2&1'. [2] -allag/er )R an% ;1ley EA. 2&&H. Current )rotocols Essential La!oratry Techni*ues. Jo/n ;1ley @ )ons, (nc., Englan%. 0.F.2.J ['] -1l#ert )F. 2&&&. "e%elopmental Biology, 5t/ e%. )un%erlan% >MA? )1nauer Assoc1ates [F] -ol%"an E an% -reen 83. 2&&J. )ractical Hand!oo+ in Micro!iology. 2n% e%1t1on. +R+ Press. *)A. 0. 1C, 2&A21

[$] -r1goryev O. 2&1'. +ell +ount1ng 61t/ a 3e"ocyto"eter Easy as 1, 2, '. B1tes1.eB1o Bra1n2oo% 2or B1olog1sts. Retr1eve% 2ro"/tt0 EEcellculture.#1tes1.e#1o.co"Eart1cle sEcellAcount1ngA61t/AaA/e"ocyto"eterAeasyA asA1A2A'E 2$ !ove"#er 2&1' [5] 3ogg ). 2&&$. Essential Micro!iology. Jo/n ;1ley @ )ons 8t%. Englan%.0. J2 8ongoA)or#ello -)A, )ay%a" -, Baner:ee D an% Bert1no JR. 2&&5. +ytoto91c1ty an% +ell -ro6t/ Assay. Cell and Tissue Culture Assorted Techni*ues. Elsev1er )c1ence. *)A 0.'1H Ru.1n, ).E. 1JJJ. Plant "1crotec/n1<ue an% "1crosco0y. O92or% *n1vers1ty Press, O92or%, !e6 Oor4 Tr1#e MA, Eraut MR an% )noo4 R=. 1JC$. Light Microscopy, +a"#r1%ge *n1vers1ty Press. s-reat Br1ta1n 0F'

AppendiCorner Flask Flask Flask Flask

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B Viable Cells 9 11 5 7

C Viable Cells 7 0 7 5 19 4$75

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