BIOL 2213 Lecture Notes
BIOL 2213 Lecture Notes
09/22/2016
INTRO
Physiology the study of how living things function (normally, in
homeostasis).
objective: list the four basic tissue types and describe their
locations and specialized functions
NEURON AND NERVOUS TISSUE
Neuron: specialized cell to initiate, integrate, and conduct electrical
signals to other cells
Make up the:
o Brain
o Spinal cord
o Nerves
Major means of control
objective: list the four basic cell and tissue types and describe their
locations and specialized functions
EPITHELIAL CELLS AND TISSUE
Linings and coverings of organs and cavities
Specialized for:
o Secretion and absorption
o Protection
Two sides of the cell:
o Basolateral anchored to basement membrane (and anchor
tissue)
o Apical faces the interior (lumen) of a structure
objective: list the four basic cell and tissue types and describe
their locations and specialized functions
CONNECTIVE CELLS AND TISSUE
Connect, anchor, and support structures in the body
o Bone
o Cartilage
o Adipose tissue (fat storing)
o Blood
Important function of connective cells: form extracellular matrix
ECM function:
o Provide scaffold for cellular attachment
o Communicate via chemical messengers to cells
other: ligaments, tendons
objective: list the four basic cell and tissue types and describe
their locations and specialized functions
HIERARCHY
Tissues
o An aggregate of similar cells
Organs
o Composed of two or more tissue types
o Some are made up of functional units
Organ systems
o Collection of organs that work TOGETHER to form overall
function
humans: cells tissues organs organ systems
objective: recall the organizational hierarchy of humans
BODY FLUIDS
Watery solution of- dissolved oxygen, nutrients, waste
Hormones
o Communicate with target cells
o Transported by blood
o Hormones produced in endocrine glands
o Important functions in many systems
Neurotransmitters
o Released from neurons to communicate with other neurons,
muscle cells, or gland cells
o Transported by diffusing through extracellular fluid separating
neuron and target cell
Paracrine or Autocrine substances
o Synthesized and released into extracellular fluid for cell to cell
communication (paracrine)
o Synthesized and released into extracellular fluid for cell
communicating with its self (autocrine)
o Usually inactivated after performing their functions
In some cases, a chemical messenger may act on all three
o Example: Norepinephrine is a neurotransmitter AND a
hormone
SATURATION
AGONIST VS ANTAGONIST
Ch. 5 covers receptors and the terms we discussed over binding. It will
be a good review as we visit receptors again over the course.
Objective: define the terms binding site and ligand and
describe the forces that bind ligands and binding sites.
define the terms specifically, affinity and saturation and apply
each term to an example.
MORE ON ENZYMES
Cofactors
o Substance that binds to enzyme
o Is necessary for enzyme activity
o In other words, cofactors alter the enzyme so it can do its
function
Ex: trace metal ( Mg, Cu, Zn )
Coenzyme
o Organic molecule participates in reaction
o Work on reactions needing to remove or add a few atoms to a
substrate
o Can act over again to transfer molecule fragments from one
reaction to another
Ex: vitamins
Objective: define enzyme, substrate, catalyze, and active site
and understand how enzymes and named.
FIGURE 3.41
Objective: Briefly describe the three metabolic pathways that
transfer energy to ATP
summarize the process of glycolysis by stating the reactants
and products.
discuss the two fates of pyruvates: further oxidation by the
Krebs Cycle if oxygen is not present.
summarize the Krebs Cycle by stating the reactants and
products.
Discuss the importance of the coenzymes NADH and FADH2
in linking Krebs Cycle and oxidative phosphorylation.
summarize oxidative phosphorylation
TRANSPORT ACROSS MEMBRANE (CHAPT 4)
DIFFUSION
DIFFUSION
Examples:
o Oxygen
o Nutrients across blood vessels
Mass = larger molecules move slower, surface area- more area =
more space for diffusion = faster net flux
CONTINUING CHAPTER 4
FICKS EQUATION
Magnitude of net flux= J
Difference in concentration outside vs. inside cell ( Co - Ci )
Surface area of membrane = A
Membrane permeability = P, this varies depending on molecule and
temp
J = PA ( Co + Ci )
[How to understand moving molecules from one side to another]
Rate of diffusion
Membranes by design slow down diffusion
The equation will show the different rates different molecules diffuse
Note- many cells of the body are close to capillaries diffusion occurs
quickly over short distances
DIFFUSION THROUGH MEMBRANES
Semipermeable: some materials allowed through, others not
Nonpolar molecules diffuse rapidly
Lipophilic (lipid-loving) substances move through easily
Steroid hormones, o2, co2, fatty acids, etc
Polar molecules and hydrophilic (water-loving) do not diffuse readily
through the membrane w/o the help of special mlcls
DIFFUSION OF IONS
Remember ions are charged particles
A simple artificial lipid bilayer is practically impermeable to ions
But cells have a solution- Ion channels
Integral membrane proteins form channels through with ions can
freely diffuse according to the electrochemical gradient
These small channels can be specific and allow the diffusion of certain
ions at certain times.
(this mean some channels are always open, some have gates)
Objective: Discuss the role of integral membrane proteins in
allowing polar molecules and ions to permeate the cell.
ELECTROCHEMICAL GRADIENT
Concentration difference and electrical diff (EM)
The magnitude of each of these also matters in instances where and
ion is moved in one direction by membrane potential and the opposite by
concentration difference.
Objective: Distinguish between ligand-gated channels, voltagegated channels, and mechanically- gated channels.
VOLTAGE GATED CHANNELS
Membrane potential moves charged areas on proteins
Objective: Distinguish between ligand-gated channels, voltagegated channels, and mechanically- gated channels.
S/N*when you have any stimuli coming into open the gate, it is
slightly changing the shape of the channel to allow that ion to go through.
Constant changes if multiple ions.
Objective: Distinguish between ligand-gated channels, voltagegated channels, and mechanically- gated channels.
Objective: Describe how proteins involved with mediatedtransport systems move molecules from one side of the membrane
to another.
FACILITATED DIFFUSION
Ex: glucose: polar molecule that needs a transporter
ACTIVE TRANSPORT (*PUMPS)
Involves the use of energy to pump a molecule against the gradient
As a mechanism of mediated transport, AT is molecules specific, and
limited by saturation and the rate of conformations change (shape)
There are two types of AT:
Primary uses ATP
Secondary uses electrochemical gradient across membrane
OSMOSIS
The net diffusion of water across a membrane, now worry about the
solvent and not the solute
Facilitated by channel proteins called AQUAPORINS (= WATER)
note some cells always have aquaporins, others add them in, in
response to regulatory molecules
during osmosis:
a difference in concentration of solutes exists on either side of the
membrane
membrane must be impermeable to the solute, making the water
move
Ex epithelial cells of kidneys have lots of aquaporins, varies slightly
depending on water balance in body
OSMOLALITY
Total solute concentration of a solution = OSMOLARITY
The # of solutes matter, not what they are. 1 osm. = 1 solute
Glucose= 1
Sodium chloride =2
Ex: during dehydration, plasma osmolality increases. This stimulates
osmoreceptors, you become thirsty, hormones act on the kidneys to retain
water
Lets us focus on ratio of solute to water molecules
Draw a figure to show numbers on water and solute
concentrations, figure 4.16 p 106
Na+: pumped actively out of the cell and enters cell during secondary
active transport
Cl-: enters during secondary active transport, electrical potential sends
it back out
Both of these ions act as non penetrating into the cell
K+: major solute inside cell, actively pumped out of cell
acts as a non penetrating
Objective: Define osmosis and the role of aquaporins.
Recognize that the concentration of water in a solution
decreases as solute concentration (i.e., osmolarity) increases.
Describe how the osmolarity of a solution depends upon the
total number of solute particles in solution, regardless of their
chemical composition.
Describe the importance of a semipermeable membrane in
osmosis.
SOLUTION TERMS
FORMS OF ENDOCYTOSIS
(ENTER cell)
pinocytosis
endocytotic vesicle engulfs extracellular fluid
non-specific any small molecule in the ECF eill enter
receptor mediated endocytosis
designed to take up SPECIFIC molecules needed by the cell
phagocytosis
cells engulf large particles and even other cells
pseudopodia fold out from the membrane
forms a phagosome (large internal vesicle)
for special cells found in the IMMUNE SYSTEM
EPITHELIAL TRANSPORT
(apical membrane vs. basolateral membrane)
cells that line hollow organs and regulate absorption or secretion of
substances
ex: movements of substances between kidney and blood
Na+ movement an active process- see the pumps!
s/n you can have different, multiple kinds of pumps around cell
may be trans-cellular (through the cell) or para-cellular ( in between
two epithelial cells)
tight junctions limit amount of ions and water that can diffuse
EPITHELIAL Na TRANSPORT
Moves by active transport, sometimes secondary active transport
Changes Na concentration, which changes water concentration
Water will move with the Na (same direction)
This is important in our renal and digestive systems!
(when we move Na, water likes to follow it)
EXAM 1
CHAPTER 1, 3, 4
CHAPTER 6 - NUEROPHYSIOLOGY
Two major divisions
CNS
o
o
PNS
o
o
three different set ups for neurons, look at pic, third is most
common
Axon transport
Myelin
Myelin sheaths speed up conduction of electrical signals along axon
(similar to rolled up carpet)
o Myelin forming cells called Oligodendrocytes (type of glial cell)
o In CNS
o Called Schwann cells in PNS
Reflex Arc
Number is not important as long as you know each step. Sometimes few
interneurons are used, sometimes stimulus and receptors are considered one step.
Membrane potential
Graded potentials
Potentials confined to small region of the membrane
magnitude can vary
short distances
can be summed
no threshold, no refractory period
Action potentials
Image slide
#2 positive feedback Na triggers depolarization, triggers more Na
channels to open
Drug facts
Local anesthetics ( eg novacaine, lidocaine) bind to Na+ channels
and therefore block response to initial depolarization- the channels
do NOT open.
o Other ex:
Cocaine
Epidural
Graded potentials vs action potentials
Graded
Local. Confined to a small region
The magnitude of the change in potential varies ( is graded)
Magnitude decreases with distance
Action
Occur over large distances
Rapid and large fluctuation in potential
All or nothing (threshold)
Both
o Involve a change in potential
o Used in cell communication
Refractory Period
Action potential sets off a new action potential in the region just
ahead of it
Therefore
o Positive feedback of Na+ allows the action potential to be
nearly identical when it reaches the end
Positive feedback: accelerates a process
Electrical
o Pre- and post- synaptic cells are connected by gap junctions
o Current flow continues across the gaps
o Found in cardiac, smooth muscle and in the CNS
Chemical
o Axon terminals hold synaptic vesicles
o Pre-synaptic neurons release neurotransmitter from their
axon terminals
o Neurotransmitter is a messenger that travels across the space
and binds to receptors on post-synaptic neurons
Summation
Temporal summation: signals arrive at different times
Drugs
Interfere or stimulate normal processes in neurotransmitter
synthesis, storage, release, and receptor activation.
Drug classifications:
o Agonist drugs that bind to a receptor and produce a
response similar to activation of that receptor
o Antagonists drugs that bind to the receptor but are unable
to activate it, only occupy it preventing any binding
EPSP = depolarizing
IPSP = hyperpolarizing
Receptors for Neurotransmitter Ach
Nicotinic Ach receptors
o Ach binds at post synaptic cell
Ex: skeletal muscle cells (how muscles contract)
Agonist: nicotine
Antagonist: curare (South American tree residue)
Muscarinic Ach Receptors
o Ach binds at post synaptic cell
Ex: digestive cells or cardio cells
Agonist: muscarine
Antagonist: atropine
**These channels are ligand gated (take Ach) to open a channel for
ions to move. So in this case you open a channel so ions move to
depolarize the post synaptic cell to give us a EPSP
Inactivate the Ach to stop activity of the postsynaptic cell
Neurotransmitters
Acetylcholine
o Synthesized from choline: a neuron releasing Ach is called a
cholinergic neuron.
o After activating post-synapse, enzyme deactivates it- which
releases choline ( that can be used over and over again ).
o Major player in the PNS: where motor neurons connect to
skeletal muscle
o Some Ach receptors respond to Nicotine.
Nicotinic receptors are important in cognitive functions
and behavior.
The presence of these receptors in certain areas of the
brain associated with reward explain why tobacco is so
addictive.
Biogenic amines
o Synthesized from amino acids
After activating their receptors they are transported
back into axon terminal or broken down by enzymes.
o Examples: dopamine, norepinephrine, epinephrine (not
common), all three called catecholamines
o Neurons releasing catecholamines located in the CNS:
regulate mood, attention, hormone release, states of
consciousness and more
o To treat depression, a monoamine oxidase inhibitors may be
used. It inhibits the process of breaking down the
catecholamine by enzymes therefore increasing the
concentration of dopamine and norepinephrine at a synapse.
(dont have to know the entire list in the book for exam 2)
Structure of the Nervous System
Cerebral Cortex
White matter contains myelinated nerve fiber tracts running
information to or from the brain
Grey matter primarily cell bodies, lots of interneurons
Lots of direction control as input fibers connect here and deliver info
about the environment, direct attention to certain stimuli, etc.
Frontal:
Voluntary motor control of skeletal muscles, higher
intellectual processes, etc.
Includes the Motor Cortex
Parietal:
Understanding speech, interpretation, somatesthetic
interpretation
Temporal:
Memory, auditory/visual experiences
Occipital:
Integration of movements of the eye
Forebrain
Thalamus:
Integrating center: allows you to focus in on ME and filter out
the other senses bombarding you right now (whispers,
writing, etc)
Relay center for sensory info
Hypothalamus:
Master command center for neural and endocrine
coordination, regulates pituitary gland
Key to homeostasis regulation
Why? Controls what you need to survive: earing,
drinking, regulation of body temp, etc.
Epithalamus:
Includes the pineal gland- regulates circadian rhythms
Hindbrain: Cerebellum
Medulla Oblongata
Consists of:
o Gray matter
Interneurons, cell bodies of efferent neurons, axons of
afferent neurons, glial cells
Shape gives rise to dorsal horn and ventral horn
Afferent: connect to the dorsal horn: called
dorsal roots
Efferent: leaves from area of the ventral horn:
called ventral roots
o White Matter
o
o
o
o
12 T-thoracic
5 L-lumbar
5 S-sacral
1 Coccygeal
AUTONOMIC DIVISIONS
Post ganglionic
Ganglia close
to the CNS.
* Ganglia close to organ/gland in parasympathetic division.
Sympathetic and Parasympathetic Differ
Sympathetic
o Increases heart rate
o Dilates and constricts veins
o Contracts bladder sphincter
Parasympathetic
o Decreases heart rate
o Releases bladder sphincter
these examples occur without conscious control except the last one.
Which is why autonomic could almost be called
involuntary/automatic. Some responses can be learned-like control
of bladder
see more on Table 6.11 page 181
FIGHT OR FIGHT
Tight junctions & transport systems in the cells lining blood vessels
of the brain offer control
Restricts movement of certain substances into and out of CNS ECF
a more selective barrier.
o Lipid soluble components enter brain quickly
o Substances combined with membrane transport proteins
enter quickly (glucose and substrates).
Some psychoactive drugs (e.g. barbiturates, nicotine, alcohol, and
heroin) only work so well because they have a high lipid solubilityenter the brain quickly.
SENSORY SYSTEM
SENSORY RECEPTORS
Definitions to Know
STIMULUS INTENSITY
STIMULUS LOCATION
Overlap
Also depends on :
Size of receptor fields,
density of sensory
units, and amount of
overlap.
STIMULUS LOCATION
LATERAL INHIBITION
Etc.
Information (the coded AP) then moves to the association area of
the cerebral cortex.
Nonspecific pathways also reach the cerebral cortex in areas
controlling alertness
Primary sensory areas:
THE SENSES
Somatic sensation
o Touch, temperature, etc
Visual
o Light
Auditory
o Sound
o Vestibular: sense of balance
Smell and taste
o Chemoreception
SOMATIC SENSATION
MECHANORECEPTORS IN SKIN
Thermoreceptors
o Ion channels that open in response to thermal cues
o Some chemicals can open channels as well
Nociceptors
o Respond to intense mechanical deformation, extreme
temperatures and chemicals that bind to ion Nociceptors
REFFERED PAIN
VISION
3 layers:
o sclera ( outer )
o choroid ( middle )
o retina ( interior )
the shape of the lens, and thus the degree of refraction is controlled
by muscles.
Adjustments or accommodations to distance of objects occur as
lens change shapes