Crystal Structures of Natural Ternary Apatites - Solid Solution in The Ca5 (PO4) 3X - F - OH - CL - System PDF
Crystal Structures of Natural Ternary Apatites - Solid Solution in The Ca5 (PO4) 3X - F - OH - CL - System PDF
Arsrn-l,cr
The crystal structures of P6r/m ternary apatite [Car(PO.)r(Fo.rrCL.rrOFtrr)]and a pre-
viously unrecognizedP2,/b tenary apatite [Car(PO.)r(Fo2ecl0oroHo2o); b : 2a, "( : l2ll
were refined to R values of 0.015 and 0.047, respectively,using three-dimensionalX-ray
data. Phosphatetetrahedraand Ca(l) polyhedra of both structuresare generallyvery sim-
ilar to analogouspolyhedra in the end-member fluor-, chlor-, and hydroxylapatite struc-
tures. The Ca(2) polyhedron, which includes among its ligandsthe column anions, exhibits
significant but regular variations in interatomic distances that can be directly correlated
to Cl content.
Solid solution in hexagonalternary apatite is achieved by a 0.4-A shift along c of the
Cl atom relative to its position in end-member chlorapatite. This adjustment affects a
Markovian sequen@of anions in the (0, 0, z) anion columns by providing a structural
environment that includes column OH speciesat a distance of 2.96 A from Cl. The shift
of the Cl atom is accompaniedby splitting of the Ca(2) atoms into two distinct positions
as a function of the kind of anion neighbor (F or OH vs. Cl). An additional nonequivalent
Cl site, similar to that in end-member chlorapatite, is also present. Those Cl atoms with
adjacent OH occupy a site different from Cl atoms adjacent to vacanciesin the anion
column.
The reduction of symmetry in monoclinic ternary apatite results from the ordering of
Cl and OH within the anion columns. The atomic positions of Cl and OH in the anion
column are equivalent to those in hexagonalternary apatite, but each is ordered into only
one of the two hexagonalsymmetry-equivalent sites.
TABLE1. Experimentaldata for hexagonal and monoclinicter- TABLE3. Anisotropic thermal parameters (x 104)for atoms in
nary apatites hexagonal ternary apatite
Hexagonal Monoclinic a
P23
' Copiesof Tables5, 8, and 9 may be orderedas Document Fig. 1. Precessionphotograph (a axis, OJevel)of monoclinic
AM-90-428from the Business Office,MineralogicalSocietyof ternary apatite. Superstructure reffections (example denoted by
America,1625I Street,N.W.,Suite414,Washington,D.C.20006, arrow) exist as (k : 2n + l, I + 0). MoKa radiation, Zr filter,
U.S.A.Pleaseremit $5.00in advancefor the microfiche. 4.0 h.
TABLE4. Selected bond lengths (A) and tetrahedral bond angles (") for hexagonalternary apatite
ca(1f-o11;r'a'c 2.403(21
-O(2;o" 2.450(21
-O(31o" 2.806(2)
Mean 2.553
Ca(2X-O(1)E 2.761(21
-o(2f 2.433(2)
-o13y'' 2.522(21
-o13Y' 2.3s3(2)
_F 2.2s13(e)
-o(Hr 2.317(3)
-cti 2.63(4)
Mean.,y 2.49',1
Ca(28-O(1)B 2.741(2)
-O(2)' 2.164(21
-o(sy,r 2.530(21
-O(3yt 2.314(21
-cta 2.6ss(4)
Mean*y 2.432
PA-O(1)o 1.537(3)
-o(2r 1.540(2)
-o(0;^i 1.528(21
Mean 1.533
O(1)^-Pa-O(2f 111 . 0 6 ( 1 2 ) o(2r-PA-o(3r 107.62(9)
o(1r-P^-o(3r 111.34(9) o(3r-PA-o(3I 107.69(9)
o: r,y,z,Table2;B: -y, x- y,zic: y - x, -x,zio: -x,-1, -zl,: y,y - x,-zlF: x- y,x, -zio = - x,-y,V2 + 2,": y,y - x,
y 2+ z i ' : x - -
Y ,x , l z + z t J : x , y , V z z l K : - y , x - y , 1 / z- 2 i L : . y - x , - x , l z - z .
298 HUGHESET AL.: CRYSTALSTRUCTURESOF TERNARYAPATITES
Tmu 6. PositionalparametersandequivalentisotropicB (Ar) metry constraints) using diffraction angles from 25 au-
for monoclinic ternaryapatite tomatically centered reflections (Table l). The cell was
defined with c as the unique monoclinic axis and D as the
superstructureaxis; thus b : 2a. Resultsof the cell refine-
Ca(1), 0.3313(1) 0.58243(5) 0.0020(1) 1.14(21
V3 0.58333 0.0018 ment and details of three-dimensionaldata collection are
Ca(1),, 0.3356(1) 0.58434(5) 0.4980(2) 1.51(2) presentedin Table l.
Y3 0.58383 0.4982 The data setand precessionphotographswereexamined
Ca(2), 0.2511(1) 0.24809(s) 0.2498(2) 1.48(21
0.24887 0.24739 1/e for systematicextinctions; refinement was initiated in space
Ca(2),, -0.0038(1) 0.622s8(6) 0.7492(2) 1.48(2) P2lb becauseofthe absenceof hkl, k:2n + |
-0.00523 $oup
0.62295 Vc reflections and by analogy to other monoclinic apatites.
Ca(2),, 0.2550(1) 0.37ss4(5) 0.750q2) 1.49(21
0.25410 0.37444 Vt The zero-moment test yielded an intensity distribution
Pl 0.4018(1) 0.43534(6) 0.2505(2) 1.01(2) not inconsistent with the centrosymmetric spacegroup.
0.40053 0.43484 Vt
Pu 0.6292(1) 0.26557(6) 0.2508(2) 1.02(2) Subsequentsuccessfulrefinement in P2r/b (and unsuc-
0.63032 0.26543 V4 cessfulrefinement in P2, and PD) supported the choice of
Pu' 0.03120) 0.45093(6) 0.7502(21 1.02(2) spacegroup.
0.03085 O.45O27 Ta
o(1), 0.3346(3) 0.4939(2) 0.2510(5) 1.41(6) Full-matrix least-squaresrefinementwasinitiated using
0.3315 0.4931 V4 the atomic positions for Ca, P, and O in P2,/b chlorapatile
O(1)" 0.4880(4) 0.3268{2) 0.7s11(5) 1.41(7) (Mackie et al., 1972). During early stagesof refinement,
o.4862 0.3274 Tt
O(1)'u 0.1534(3) 0.5829(2) 0.2492(51 1.41(7) no column anions were included and isotropic B values
0.1547 0.5843 V4 were fixed. After initial refinement, equivalent data were
o(2), 0.5894(4) 0.4825(21 0.246s(6) 1.63(7)
0.5884 0.4826 l/c averagedand isotropic thermal parameterswere refined.
o(2)', 0.s346(4) 0.3121(2) 0.2490(6) 1.62(7) The R value convergedat 0.146 without addition of col-
0.5349 0.3117 V4 umn anions. A differencemap then revealedthat the four
O(2),u 0.1242(4) o.s447(21 0.7476(6) 1.60(7)
0.1233 0.5442 lq largest peaks were near (0, t/t, z), which are equivalent to
o(3), 0.3441(4) 0.3800(2) 0.0709(6) 2.00(7) (0, 0, z) positions in space$oup P63/m. Based on the
0.3450 0.3799 0.0699
O(3),' 0.7399(4) 0.2926(21 0.7010(6) 1.8s(8)
bond dislance to Ca(2), one site was assignedto Cl and
0.7403 0.2927 0.0699 the other three were modeled with F scatteringfactors to
O(3)'" 0.0846(4) 0.4217(2) 0.5710(6) 1.eq7) representthe iso-electronicF and O ions. Occupancywas
0.0853 0.4225 0.5699
O(3)'" 0.3508(4) 0.3817(2) 0.4331(6) 2.00(7) refined, and fixed isotropic ,B values of F : 1.0 and Cl :
0.3450 0.3799 0.4301 1.5 A' were assigned.The R value convergedat 0.081,
o(3), 0.736s(4) 0.2932(21 0.4329(6) 2.10(8) and a differencemap revealed no missing atoms.
0.7403 0.2927 0.4301
o(3)", 0.086s(4) 0.4258(2) 0.9338(6) 2.05(8) The psi-scan<orrecteddata were further adjustedusing
0.0853 0.4225 0.9301 the program DTFABS of Walker and Stuart (1983). After
Cl" - 0.000(1) 0.2507(6) 0.130(2) 1.39(20) re-averagingdata and refining all atoms except column
n V4 0.132
Cl^ -0.0000(s) 0.2494(21 0.4345(7) 1.22(6) anions in the anisotropic mode, R : 0.049.
0 V4 0.44 Comparison of positions of the column anion siteswith
F 0.0000(8) 0.2502(41 0.237(11 1.40(10)
0 V4 1/t those in hexagonalternary apatite suggestedthat one site
o(H) 0.0006(8) 0.2498(41 0.340(1) 0.14(10) assignedto O andlor F in the early stagesofrefinement
0 V4 0.30 was equivalent to a chlorine position in hexagonalternary
Note: For all atoms, the atomic coordinates in the second row are cal- apatite. After assigning Cl to that position and further
culated from the parameters of equivalent atoms in hexagonal ternary refining the structure by alternatively refining column-
apatite [without disordered Ca(2)] with appropriatetransformationto the
cellfrcltntlb. anion occupancy and isotropic thermal parameters, R
'Roman numeral subscripts
designate monoclinic, symmetricallyde- convergedat0.047. The data did not support anisotropic
generate equivalentsof hexagonalatoms.
thermal-parameter refinement for column anions. In the
final refinement with isotropic temperaturefactors for the
column anions, the -Bvalue of the column hydroxyl oxy-
lection confirmed that the crystal was a F-, OH-, Cl-bear- gen refined to an atypically low value (0.14 A'z). Anion
ing ternary apatite. Microprobe analysis yielded the occupancy convergedat Cl : 0.37, F : 0.38, and O(H)
formula Ca,or(P,ooSio or)"r.orO,r(ForeoHo24CL.47)rr 00,with : 0.29 atoms per formula unit, comparedto Cl : 0.47,
OH obtained by difference. F : 0.29 and O(H) : 0.24 atoms per formula unit by
Prior to structure analysis we realized that the crystal, microprobe. The differencesare attributed to the inferior
the only one isolated to date, was not of ideal quality for quality of the crystal; diference maps showedno unusual
a high-precision X-ray structure study. Abundant inclu- peaksin the anion columns.
sions (-3-4 volo/o?)and the large crystal size precluded a A zero-sigmacutoffand unit weights for all reflections
superior refinement, but the unique nature of the prelim- were used throughout all refinement cycles.The data set
inary data prompted further study. essentiallyconsistsoftwo groups ofreflections, the very
The crystal was mormted on an Enraf-Nonius ca>+ dif- weak superstructurereflectionsand the strong"hexagonal
fractometer. Lattice parameters were refined (no sym- apatite" reflections.Exhaustiveexperimentationwith var-
HUGHES ET AL,: CRYSTAL STRUCTURES OF TERNARY APATITES 299
TABLE7. Bond lengths (A) and tetrahedral bond angles (") for atoms in monoclinicternary apatite
ious weighting schemesand cutoff values demonstrated atoms [except O(H)], and Table 9 (seefootnote l) gives
that their use biased the data set against the weaker su- observed and calculated structure factors.
perstructure reflections, and thus unit weights for all re-
flections were used. This choice of refinement parameters
CoNrrcuru.TroN oF ANroN coLUMNs AND
may affect the final R value and thermal parameters,but
MECHANISMS OF.SOLID SOLUTION
it does not bias the data set nor ultimately the positional
parametersagainst the superstructurereflections. Hexagonal variants
Table 6 presents positional parameters and isotropic In end-member hexagonalapatite structuresthe posi-
thermal parameters for all atoms in the structure, and tions ofcolumn anions arenot constrainedbyunlike anion
Table 7 gives selectedbond lengthsand tetrahedral bond speciesin the [0, 0, z] anion columns. Thus the column
anglesfor the structure. Table 8 (seefootnote l) presents anions occur at sitesthat result in the ideal bond distance
anisotropic thermal parametersfor all cations and oxygen to the trigonally disposedCa(2)atoms in the mirror planes
300 HUGHESET AL.: CRYSTALSTRUCTURESOF TERNARY APATITES
.A
2.60
Ca(l) polyhedron are minimal; however, variations with-
.--r-------------o-----__._!1e_11__c_{_11:_91:__"_"_:11 jl*. in the Ca(2) polyhedron, which includes among its ligands
2.50
B.
the column anions, are regular and can be related to the
Cl content.
2.50 Ao
a- - > --' -' -' -- --'+------{----'
-------.-
Phosphate tetrahedra in both ternary structures have
Deatr Ca(2)-O: 5 oxygens
2.40
Bo
statistically identical mean P-O bond distances(1.532-
.c. 1.533 A). These values are identical, within +3 esd, to
those observed for end-member fluor-, hydroxyl-, and
A -----a"' chlorapatite (Hughes et al., 1989). Individual P-O bond
) 1<
;----""""""1s distancesand O-P-O anglesare essentiallyconstant with
ca(2)-o.)
2.65
the exceptionof thoseinvolving O(3) atoms,which exhibit
o very small but systematic variations correlative with Cl
o A.D
2.40 F tBn- content.
o-----------_____l
.t) oft
MUN
-_____-___- In both the ternary apatitesdiscussedherein and in end-
2.30 TEn_----r-----
HEX cl member phosphate apatites discussedby Hughes et al.
(1989),Ca(l) bonds to three O(l) and three O(2) at short
a 2.20 _ Cz(D-O(2)
distances(-2.3-2.4 A) and three O(3) at longer distances
E.
2.45
a--a-------------t------G'-------_-----------l
(-2.8 A). Differencesin interatomic distancesamong the
()
AB Ca(2)-O(3) five ternary and end-member structures are minor, al-
2.35
F. though there is a slight tendency for the mean Ca(l)-O
2.'.10 distancesto decrease( - 0.0 I A; with increasingCl content
a Gie.a).
2.60 Ca(2)-CI The Ca(2) polyhedron in phosphate apatites is an ir-
G. regularly shapedpolyhedron that is at least 6-coordinate
4 . 5 0 ._- - ' - - - - - - - - ' -
Trian8les with significant [one O(2), four O(3), and one X column anion]. The co-
bonding
. ----)---.ca-cl ordination number may be larger if Ca(2) bonds to an
4.30 ' O(l) atom or to an additional Cl atom. In hexagonalend-
, Ttl"nglo witb oo or
minor Ca-Cl bonding o
member apatites, Ihe Ca(2) in the F and OH speciesis
4 1 0 ' l a{ * - - - - -
,,-
7-coordinate if a long bond to O(1) (ca. 2.7 A) is included
Ca(2)_Ca<2,
3.90
_ _.__ _ _ _ - - _. - _ _._ in the coordination sphere,whereasin chlorapatite it is
S-coordinateif both O(l) (ca. 2.9 A) and a weak bond to
a secondCl atom are included. In the ternary hexagonal
VoCl apatite reported in this study, Ca(2)is disorderedinto two
Fig. 4. Selected interatomic distances in natural F, Cl, OH sites, as discussedpreviously. The disordered Ca(2)opo-
ternary and end-member apatites. Ternary data (TER-HEX and sition is similar to that recognized in the end-member
TER-MOI{) are reported in this paper; end-member data (Cl, F, apatite structures,with Ca(2)" bonding to F, OH, and Cl^
OH) are reported by Hughes et al. (1989). The data for ternary at distancesof -2.29,2.32,and2.63 A,respectively.The
hexagonal apatite represented by triangles are interatomic dis-
atom in the Ca(2)" position bonds to Clr, a unique Cl
tancesfor the averageCa(2) atom prior to refinement with a split-
position recognizedin ternary and Cl-bearingbinary apa-
atorn model; "A" and "B" in B, C, D, and E refer to split Ca(2)
atoms. Dotted line at 2-7 A in F included for reference; dashed tites. A similar disordering of Ca(2) is expected in the
line in G taken from Sudarsanan41d fsrrng (1978). Seetext for ternary monoclinic apatite based on the magnitude of the
further discussion. Size of symbols is generally larger than + I thermal parameters(Table 6), but the split atom was not
esd for each data point. modeled becauseof the lower quality of the data collected
from the inferior monoclinic crystal.
Interatomic distancesbetween Ca(2) and its ligands vary
apatites possessesmonoclinic symmetry, nor which phys- regularly with Cl content in the five apatites we have
ical or chemical conditions may result in monoclinicity studied (this study and Hughes et al., 1989).The average
in ternary (Cl, OH, F) species. The structures presented of the four Ca(2)-O(3)bonds remains approximately con-
here, however, illustrate the unaddressed complexities in stant at 2.42-2.43 A Gig. 4) in all of the structures.With
apatite crystal chemistry in that two crystals of similar increasingCl content, the Ca(2)-O(2)bond decreasessig-
composition differ in symmetry as a result of column- nificantly, whereasthe Ca(2)-O(l) distance increasessig-
anion ordering. nificantly.
In a previous study of end-member hexagonalapatites,
ClrroN PoLYHEDRA Hugheset al. (1989) interpreted the increasein the Ca(2)-
The topological variations exhibited by cation poly- O(l) distancein chlorapatite (vs. fluor- and hydroxylapa-
hedra in both ternary apatites result from perturbations tite) as a mechanism to reduceoverbonding of Ca(2) that
introduced by Cl atoms in the column-anion sites. Effects results from its coordination to a secondCl atom in the
on interatomic distances in the P tetrahedron and the [001] column. In the ternary structures,it appearsthat the
HUGHESET AL.: CRYSTALSTRUCTURESOF TERNARY APATITES 303
Weber, W.J., and Roberts, F.P. (1983) A review of radiation effectsin Yardley, B.W.D. (1985)Apatite composition and the fugacitiesof HF and
solid nuclear waste forms. Nuclear Technology,60, 178-19E. HCI in metamorphic fluids. Mineralogical Magazine, 49, 77-79.
Wilson, A.J.Q. Sudarsanan,trL, and Young, R.A. (1977) The structures
of some cadmium "apa.tites" Cdr(MO.)rX: II. The distributions of the
halogen atoms in Cd'(VO4)!I, C4(PO"),8r, C<t,(AsOn),8r, Cd,(VOo),Br MeNuscnrpt REcETvEDAucusr 2l', 1989
and Cd,(PO),CI. Acta Crystallographica,B33, 3142-3154. Mem;scnrpt AccEprEDNoverr.rneR28, 1989