Ipython Manual
Ipython Manual
Fernando Pérez∗
May 9, 2007
Contents
1 Overview 5
1.1 Main features . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 5
1.2 Portability and Python requirements . . . . . . . . . . . . . . . . . . . . . . . . . . . . 7
1.3 Location . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 7
2 Installation 8
2.1 Instant instructions . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 8
2.2 Detailed Unix instructions (Linux, Mac OS X, etc.) . . . . . . . . . . . . . . . . . . . . 8
2.2.1 Mac OSX information . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 8
2.3 Windows instructions . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 10
2.3.1 Installation procedure . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 11
2.4 Upgrading from a previous version . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 11
3 Initial configuration. . . 12
3.1 Access to the Python help system . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 12
3.2 Editor . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 12
3.3 Color . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 13
3.3.1 Input/Output prompts and exception tracebacks . . . . . . . . . . . . . . . . 14
3.3.2 Object details (types, docstrings, source code, etc.) . . . . . . . . . . . . . . . . 14
3.4 (X)Emacs configuration . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 15
∗
Department of Applied Mathematics, University of Colorado at Boulder. <[email protected]>
1
CONTENTS CONTENTS
4 Quick tips 16
4.1 Source code handling tips . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 18
4.2 Effective logging . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 19
5 Command-line use 20
5.1 Special Threading Options . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 20
5.2 Regular Options . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 21
6 Interactive use 25
6.1 Caution for Windows users . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 25
6.2 Magic command system . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 26
6.2.1 Magic commands . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 27
6.3 Access to the standard Python help . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 45
6.4 Dynamic object information . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 45
6.5 Readline-based features . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 46
6.5.1 Command line completion . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 46
6.5.2 Search command history . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 46
6.5.3 Persistent command history across sessions . . . . . . . . . . . . . . . . . . . . 47
6.5.4 Autoindent . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 47
6.5.5 Customizing readline behavior . . . . . . . . . . . . . . . . . . . . . . . . . . . 47
6.6 Session logging and restoring . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 48
6.7 System shell access . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 49
6.7.1 Manual capture of command output . . . . . . . . . . . . . . . . . . . . . . . . 49
6.8 System command aliases . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 50
6.9 Recursive reload . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 50
6.10 Verbose and colored exception traceback printouts . . . . . . . . . . . . . . . . . . . . 50
6.11 Input caching system . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 50
6.12 Output caching system . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 51
6.13 Directory history . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 52
6.14 Automatic parentheses and quotes . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 52
6.14.1 Automatic parentheses . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 52
6.14.2 Automatic quoting . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 52
2
CONTENTS CONTENTS
7 Customization 53
7.1 Sample ipythonrc file . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 54
7.2 Fine-tuning your prompt . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 66
7.2.1 Prompt examples . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 67
7.3 IPython profiles . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 67
8 IPython as default... 68
9 Embedding IPython 68
13 Threading support 79
13.1 Tk issues . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 79
13.2 Signals and Threads . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 80
13.3 I/O pitfalls . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 80
3
CONTENTS CONTENTS
17 Reporting bugs 85
18 Brief history 85
18.1 Origins . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 85
18.2 Current status . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 86
18.3 Future . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 86
19 License 86
20 Credits 87
4
1 OVERVIEW
1 Overview
One of Python’s most useful features is its interactive interpreter. This system allows very fast
testing of ideas without the overhead of creating test files as is typical in most programming lan-
guages. However, the interpreter supplied with the standard Python distribution is somewhat
limited for extended interactive use.
IPython is a free software project (released under the BSD license) which tries to:
1. Provide an interactive shell superior to Python’s default. IPython has many features for
object introspection, system shell access, and its own special command system for adding
functionality when working interactively. It tries to be a very efficient environment both for
Python code development and for exploration of problems using Python objects (in situa-
tions like data analysis).
2. Serve as an embeddable, ready to use interpreter for your own programs. IPython can
be started with a single call from inside another program, providing access to the current
namespace. This can be very useful both for debugging purposes and for situations where a
blend of batch-processing and interactive exploration are needed.
3. Offer a flexible framework which can be used as the base environment for other systems with
Python as the underlying language. Specifically scientific environments like Mathematica,
IDL and Matlab inspired its design, but similar ideas can be useful in many fields.
4. Allow interactive testing of threaded graphical toolkits. IPython has support for interac-
tive, non-blocking control of GTK, Qt and WX applications via special threading flags. The
normal Python shell can only do this for Tkinter applications.
• Dynamic object introspection. One can access docstrings, function definition prototypes,
source code, source files and other details of any object accessible to the interpreter with a
single keystroke (‘?’, and using ‘??’ provides additional detail).
• Searching through modules and namespaces with ‘*’ wildcards, both when using the ‘?’
system and via the %psearch command.
• Completion in the local namespace, by typing TAB at the prompt. This works for keywords,
methods, variables and files in the current directory. This is supported via the readline li-
brary, and full access to configuring readline’s behavior is provided.
• Numbered input/output prompts with command history (persistent across sessions and
tied to each profile), full searching in this history and caching of all input and output.
5
1.1 Main features 1 OVERVIEW
• Complete system shell access. Lines starting with ! are passed directly to the system shell,
and using !! captures shell output into python variables for further use.
• The ability to expand python variables when calling the system shell. In a shell command,
any python variable prefixed with $ is expanded. A double $$ allows passing a literal $ to
the shell (for access to shell and environment variables like $PATH).
• Filesystem navigation, via a magic %cd command, along with a persistent bookmark system
(using %bookmark) for fast access to frequently visited directories.
• A lightweight persistence framework via the %store command, which allows you to save
arbitrary Python variables. These get restored automatically when your session restarts.
• Automatic indentation (optional) of code as you type (through the readline library).
• Macro system for quickly re-executing multiple lines of previous input with a single name.
Macros can be stored persistently via %store and edited via %edit.
• Session logging (you can then later use these logs as code in your programs). Logs can
optionally timestamp all input, and also store session output (marked as comments, so the
log remains valid Python source code).
• Session restoring: logs can be replayed to restore a previous session to the state where you
left it.
• Verbose and colored exception traceback printouts. Easier to parse visually, and in verbose
mode they produce a lot of useful debugging information (basically a terminal version of
the cgitb module).
• Auto-quoting: using ‘,’ or ‘;’ as the first character forces auto-quoting of the rest of the
line: ‘,my_function a b’ becomes automatically ‘my_function("a","b")’, while
‘;my_function a b’ becomes ‘my_function("a b")’.
• Extensible input syntax. You can define filters that pre-process user input to simplify input
in special situations. This allows for example pasting multi-line code fragments which start
with ‘> > >’ or ‘...’ such as those from other python sessions or the standard Python
documentation.
• Flexible configuration system. It uses a configuration file which allows permanent setting
of all command-line options, module loading, code and file execution. The system allows
recursive file inclusion, so you can have a base file with defaults and layers which load other
customizations for particular projects.
• Embeddable. You can call IPython as a python shell inside your own python programs. This
can be used both for debugging code or for providing interactive abilities to your programs
with knowledge about the local namespaces (very useful in debugging and data analysis
situations).
6
1 OVERVIEW 1.2 Portability and Python requirements
• Easy debugger access. You can set IPython to call up an enhanced version of the Python
debugger (pdb) every time there is an uncaught exception. This drops you inside the code
which triggered the exception with all the data live and it is possible to navigate the stack
to rapidly isolate the source of a bug. The %run magic command –with the -d option– can
run any script under pdb’s control, automatically setting initial breakpoints for you. This
version of pdb has IPython-specific improvements, including tab-completion and traceback
coloring support.
• Profiler support. You can run single statements (similar to profile.run()) or complete
programs under the profiler’s control. While this is possible with standard cProfile or
profile modules, IPython wraps this functionality with magic commands (see ‘%prun’
and ‘%run -p’) convenient for rapid interactive work.
Python requirements: IPython requires with Python version 2.3 or newer. If you are still using
Python 2.2 and can not upgrade, the last version of IPython which worked with Python 2.2 was
0.6.15, so you will have to use that.
IPython is developed under Linux, but it should work in any reasonable Unix-type system (tested
OK under Solaris and the *BSD family, for which a port exists thanks to Dryice Liu).
Mac OS X: it works, apparently without any problems (thanks to Jim Boyle at Lawrence Livermore
for the information). Thanks to Andrea Riciputi, Fink support is available.
CygWin: it works mostly OK, though some users have reported problems with prompt coloring.
No satisfactory solution to this has been found so far, you may want to disable colors permanently
in the ipythonrc configuration file if you experience problems. If you have proper color support
under cygwin, please post to the IPython mailing list so this issue can be resolved for all users.
Windows: it works well under Windows XP/2k, and I suspect NT should behave similarly. Sec-
tion 2.3 describes installation details for Windows, including some additional tools needed on this
platform.
Windows 9x support is present, and has been reported to work fine (at least on WinME).
Note, that I have very little access to and experience with Windows development. However, an
excellent group of Win32 users (led by Ville Vainio), consistently contribute bugfixes and platform-
specific enhancements, so they more than make up for my deficiencies on that front. In fact, Win32
users report using IPython as a system shell (see Sec. 12 for details), as it offers a level of control
and features which the default cmd.exe doesn’t provide.
1.3 Location
7
2 INSTALLATION
2 Installation
If you are of the impatient kind, under Linux/Unix simply untar/unzip the download, then in-
stall with ‘python setup.py install’. Under Windows, double-click on the provided .exe
binary installer.
Then, take a look at Sections 3 for configuring things optimally and 4 for quick tips on efficient
use of IPython. You can later refer to the rest of the manual for all the gory details.
See the notes in sec. 2.4 for upgrading IPython versions.
For RPM based systems, simply install the supplied package in the usual manner. If you download
the tar archive, the process is:
1. Unzip/untar the ipython-XXX.tar.gz file wherever you want (XXX is the version num-
ber). It will make a directory called ipython-XXX. Change into that directory where you
will find the files README and setup.py. Once you’ve completed the installation, you can
safely remove this directory.
2. If you are installing over a previous installation of version 0.2.0 or earlier, first remove your
$HOME/.ipython directory, since the configuration file format has changed somewhat (the
’=’ were removed from all option specifications). Or you can call ipython with the -upgrade
option and it will do this automatically for you.
3. IPython uses distutils, so you can install it by simply typing at the system prompt (don’t
type the $)
$ python setup.py install
Note that this assumes you have root access to your machine. If you don’t have root access
or don’t want IPython to go in the default python directories, you’ll need to use the --home
option (or --prefix). For example:
$ python setup.py install --home $HOME/local
will install IPython into $HOME/local and its subdirectories (creating them if necessary).
You can type
$ python setup.py --help
for more details.
Note that if you change the default location for --home at installation, IPython may end
up installed at a location which is not part of your $PYTHONPATH environment variable.
In this case, you’ll need to configure this variable to include the actual directory where the
IPython/ directory ended (typically the value you give to --home plus /lib/python).
Under OSX, there is a choice you need to make. Apple ships its own build of Python, which
lives in the core OSX filesystem hierarchy. You can also manually install a separate Python, either
8
2 INSTALLATION 2.2 Detailed Unix instructions (Linux, Mac OS X, etc.)
purely by hand (typically in /usr/local) or by using Fink, which puts everything under /sw.
Which route to follow is a matter of personal preference, as I’ve seen users who favor each of
the approaches. Here I will simply list the known installation issues under OSX, along with their
solutions.
This page: http://geosci.uchicago.edu/~tobis/pylab.html contains information on
this topic, with additional details on how to make IPython and matplotlib play nicely under OSX.
GUI problems
The following instructions apply to an install of IPython under OSX from unpacking the .tar.gz
distribution and installing it for the default Python interpreter shipped by Apple. If you are using
a fink install, fink will take care of these details for you, by installing IPython against fink’s Python.
IPython offers various forms of support for interacting with graphical applications from the com-
mand line, from simple Tk apps (which are in principle always supported by Python) to interac-
tive control of WX, Qt and GTK apps. Under OSX, however, this requires that ipython is installed
by calling the special pythonw script at installation time, which takes care of coordinating things
with Apple’s graphical environment.
So when installing under OSX, it is best to use the following command:
$ sudo pythonw setup.py install --install-scripts=/usr/local/bin
or
$ sudo pythonw setup.py install --install-scripts=/usr/bin
depending on where you like to keep hand-installed executables.
The resulting script will have an appropriate shebang line (the first line in the script whic begins
with #!...) such that the ipython interpreter can interact with the OS X GUI. If the installed ver-
sion does not work and has a shebang line that points to, for example, just /usr/bin/python,
then you might have a stale, cached version in your build/scripts-<python-version> di-
rectory. Delete that directory and rerun the setup.py.
It is also a good idea to use the special flag --install-scripts as indicated above, to ensure
that the ipython scripts end up in a location which is part of your $PATH. Otherwise Apple’s
Python will put the scripts in an internal directory not available by default at the command line (if
you use /usr/local/bin, you need to make sure this is in your $PATH, which may not be true
by default).
Readline problems
By default, the Python version shipped by Apple does not include the readline library, so central to
IPython’s behavior. If you install IPython against Apple’s Python, you will not have arrow keys,
tab completion, etc. For Mac OSX 10.3 (Panther), you can find a prebuilt readline library here:
http://pythonmac.org/packages/readline-5.0-py2.3-macosx10.3.zip
If you are using OSX 10.4 (Tiger), after installing this package you need to either:
9
2.3 Windows instructions 2 INSTALLATION
2. install http://pythonmac.org/packages/TigerPython23Compat.pkg.zip
Users installing against Fink’s Python or a properly hand-built one should not have this problem.
DarwinPorts
I report here a message from an OSX user, who suggests an alternative means of using IPython
under this operating system with good results. Please let me know of any updates that may be
useful for this section. His message is reproduced verbatim below:
• Integrated readline support (Tab-based file, object and attribute completion, input history
across sessions, editable command line, etc.)
• Coloring of prompts, code and tracebacks.
These, by default, are only available under Unix-like operating systems. However, thanks to Gary
Bishop’s work, Windows XP/2k users can also benefit from them. His readline library originally
implemented both GNU readline functionality and color support, so that IPython under Windows
XP/2k can be as friendly and powerful as under Unix-like environments.
This library, now named PyReadline, has been absorbed by the IPython team (Jörgen Stenarson,
in particular), and it continues to be developed with new features, as well as being distributed
directly from the IPython site.
The PyReadline extension requires CTypes and the windows IPython installer needs PyWin32,
so in all you need:
10
2 INSTALLATION 2.4 Upgrading from a previous version
Warning about a broken readline-like library: several users have reported problems stemming
from using the pseudo-readline library at http://newcenturycomputers.net/projects/
readline.html. This is a broken library which, while called readline, only implements an in-
complete subset of the readline API. Since it is still called readline, it fools IPython’s detection
mechanisms and causes unpredictable crashes later. If you wish to use IPython under Windows,
you must NOT use this library, which for all purposes is (at least as of version 1.6) terminally
broken.
Once you have the above installed, from the IPython download directory grab the
ipython-XXX.win32.exe file, where XXX represents the version number. This is a regular win-
dows executable installer, which you can simply double-click to install. It will add an entry for
IPython to your Start Menu, as well as registering IPython in the Windows list of applications, so
you can later uninstall it from the Control Panel.
IPython tries to install the configuration information in a directory named .ipython (_ipython
under Windows) located in your ‘home’ directory. IPython sets this directory by looking for
a HOME environment variable; if such a variable does not exist, it uses HOMEDRIVE\HOMEPATH
(these are always defined by Windows). This typically gives something like C:\Documents and
Settings\YourUserName, but your local details may vary. In this directory you will find all the
files that configure IPython’s defaults, and you can put there your profiles and extensions. This
directory is automatically added by IPython to sys.path, so anything you place there can be
found by import statements.
Upgrading For an IPython upgrade, you should first uninstall the previous version. This will
ensure that all files and directories (such as the documentation) which carry embedded version
strings in their names are properly removed.
Manual installation under Win32 In case the automatic installer does not work for some reason,
you can download the ipython-XXX.tar.gz file, which contains the full IPython source distri-
bution (the popular WinZip can read .tar.gz files). After uncompressing the archive, you can
install it at a command terminal just like any other Python module, by using ‘python setup.py
install’.
After the installation, run the supplied win32_manual_post_install.py script, which creates
the necessary Start Menu shortcuts for you.
If you are upgrading from a previous version of IPython, after doing the routine installation de-
scribed above, you should call IPython with the -upgrade option the first time you run your
new copy. This will automatically update your configuration directory while preserving copies of
your old files. You can then later merge back any personal customizations you may have made
into the new files. It is a good idea to do this as there may be new options available in the new
configuration files which you will not have.
11
3 INITIAL CONFIGURATION. . .
Under Windows, if you don’t know how to call python scripts with arguments from a command
line, simply delete the old config directory and IPython will make a new one. Win2k and WinXP
users will find it in C:\Documents and Settings\YourUserName\_ipython, and Win 9x
users under C:\Program Files\IPython\_ipython.
This section will help you set various things in your environment for your IPython sessions to
be as efficient as possible. All of IPython’s configuration information, along with several exam-
ple files, is stored in a directory named by default $HOME/.ipython. You can change this by
defining the environment variable IPYTHONDIR, or at runtime with the command line option
-ipythondir.
If all goes well, the first time you run IPython it should automatically create a user copy of the
config directory for you, based on its builtin defaults. You can look at the files it creates to learn
more about configuring the system. The main file you will modify to configure IPython’s behavior
is called ipythonrc (with a .ini extension under Windows), included for reference in Sec. 7.1.
This file is very commented and has many variables you can change to suit your taste, you can
find more details in Sec. 7. Here we discuss the basic things you will want to make sure things are
working properly from the beginning.
This is true for Python in general (not just for IPython): you should have an environment variable
called PYTHONDOCS pointing to the directory where your HTML Python documentation lives. In
my system it’s /usr/share/doc/python-docs-2.3.4/html, check your local details or ask
your systems administrator.
This is the directory which holds the HTML version of the Python manuals. Unfortunately it
seems that different Linux distributions package these files differently, so you may have to look
around a bit. Below I show the contents of this directory on my system for reference:
[html]> ls
about.dat acks.html dist/ ext/ index.html lib/ modindex.html
stdabout.dat tut/ about.html api/ doc/ icons/ inst/ mac/ ref/ style.css
You should really make sure this variable is correctly set so that Python’s pydoc-based help system
works. It is a powerful and convenient system with full access to the Python manuals and all
modules accessible to you.
Under Windows it seems that pydoc finds the documentation automatically, so no extra setup
appears necessary.
3.2 Editor
The %edit command (and its alias %ed) will invoke the editor set in your environment as EDITOR.
If this variable is not set, it will default to vi under Linux/Unix and to notepad under Windows.
You may want to set this variable properly and to a lightweight editor which doesn’t take too long
12
3 INITIAL CONFIGURATION. . . 3.3 Color
to start (that is, something other than a new instance of Emacs). This way you can edit multi-line
code quickly and with the power of a real editor right inside IPython.
If you are a dedicated Emacs user, you should set up the Emacs server so that new requests are
handled by the original process. This means that almost no time is spent in handling the request
(assuming an Emacs process is already running). For this to work, you need to set your EDITOR
environment variable to ’emacsclient’. The code below, supplied by Francois Pinard, can then
be used in your .emacs file to enable the server:
(defvar server-buffer-clients)
(when (and (fboundp ’server-start) (string-equal (getenv "TERM")
’xterm))
(server-start)
(defun fp-kill-server-with-buffer-routine ()
(and server-buffer-clients (server-done)))
(add-hook ’kill-buffer-hook ’fp-kill-server-with-buffer-routine))
You can also set the value of this editor via the commmand-line option ’-editor’ or in your
ipythonrc file. This is useful if you wish to use specifically for IPython an editor different from
your typical default (and for Windows users who tend to use fewer environment variables).
3.3 Color
The default IPython configuration has most bells and whistles turned on (they’re pretty safe). But
there’s one that may cause problems on some systems: the use of color on screen for displaying
information. This is very useful, since IPython can show prompts and exception tracebacks with
various colors, display syntax-highlighted source code, and in general make it easier to visually
parse information.
The following terminals seem to handle the color sequences fine:
• Linux main text console, KDE Konsole, Gnome Terminal, E-term, rxvt, xterm.
• CDE terminal (tested under Solaris). This one boldfaces light colors.
• (X)Emacs buffers. See sec.3.4 for more details on using IPython with (X)Emacs.
• A Windows (XP/2k) command prompt with Gary Bishop’s support extensions. Gary’s exten-
sions are discussed in Sec. 2.3.
• A Windows (XP/2k) CygWin shell. Although some users have reported problems; it is not
clear whether there is an issue for everyone or only under specific configurations. If you
have full color support under cygwin, please post to the IPython mailing list so this issue
can be resolved for all users.
• Windows command prompt in WinXP/2k logged into a Linux machine via telnet or ssh.
• Windows native command prompt in WinXP/2k, without Gary Bishop’s extensions. Once
Gary’s readline library is installed, the normal WinXP/2k command prompt works perfectly.
13
3.3 Color 3 INITIAL CONFIGURATION. . .
• NoColor: uses no color escapes at all (all escapes are empty “ “ strings). This ’scheme’ is
thus fully safe to use in any terminal.
• Linux: works well in Linux console type environments: dark background with light fonts.
It uses bright colors for information, so it is difficult to read if you have a light colored
background.
• LightBG: the basic colors are similar to those in the Linux scheme but darker. It is easy to
read in terminals with light backgrounds.
IPython uses colors for two main groups of things: prompts and tracebacks which are directly
printed to the terminal, and the object introspection system which passes large sets of data through
a pager.
You can test whether the colored prompts and tracebacks work on your system interactively by
typing ’%colors Linux’ at the prompt (use ’%colors LightBG’ if your terminal has a light
background). If the input prompt shows garbage like:
[0;32mIn [[1;32m1[0;32m]: [0;00m
instead of (in color) something like:
In [1]:
this means that your terminal doesn’t properly handle color escape sequences. You can go to a ’no
color’ mode by typing ’%colors NoColor’.
You can try using a different terminal emulator program (Emacs users, see below). To permanently
set your color preferences, edit the file $HOME/.ipython/ipythonrc and set the colors option
to the desired value.
IPython has a set of special functions for studying the objects you are working with, discussed
in detail in Sec. 6.4. But this system relies on passing information which is longer than your
screen through a data pager, such as the common Unix less and more programs. In order to
be able to see this information in color, your pager needs to be properly configured. I strongly
recommend using less instead of more, as it seems that more simply can not understand colored
text correctly.
In order to configure less as your default pager, do the following:
2. Set the environment LESS variable to -r (plus any other options you always want to pass
to less by default). This tells less to properly interpret control sequences, which is how
color information is given to your terminal.
14
3 INITIAL CONFIGURATION. . . 3.4 (X)Emacs configuration
For the csh or tcsh shells, add to your ~/.cshrc file the lines:
setenv PAGER less
setenv LESS -r
There is similar syntax for other Unix shells, look at your system documentation for details.
If you are on a system which lacks proper data pagers (such as Windows), IPython will use a very
limited builtin pager.
Thanks to the work of Alexander Schmolck and Prabhu Ramachandran, currently (X)Emacs and
IPython get along very well.
Important note: You will need to use a recent enough version of python-mode.el, along with
the file ipython.el. You can check that the version you have of python-mode.el is new
enough by either looking at the revision number in the file itself, or asking for it in (X)Emacs
via M-x py-version. Versions 4.68 and newer contain the necessary fixes for proper IPython
support.
The file ipython.el is included with the IPython distribution, in the documentation directory
(where this manual resides in PDF and HTML formats).
Once you put these files in your Emacs path, all you need in your .emacs file is:
(require ’ipython)
This should give you full support for executing code snippets via IPython, opening IPython as
your Python shell via C-c !, etc.
If you happen to get garbage instead of colored prompts as described in the previous section, you
may need to set also in your .emacs file:
(setq ansi-color-for-comint-mode t)
Notes
• There is one caveat you should be aware of: you must start the IPython shell before attempt-
ing to execute any code regions via C-c |. Simply type C-c ! to start IPython before
passing any code regions to the interpreter, and you shouldn’t experience any problems.
This is due to a bug in Python itself, which has been fixed for Python 2.3, but exists as of
Python 2.2.2 (reported as SF bug [ 737947 ]).
• The (X)Emacs support is maintained by Alexander Schmolck, so all comments/requests
should be directed to him through the IPython mailing lists.
• This code is still somewhat experimental so it’s a bit rough around the edges (although in
practice, it works quite well).
• Be aware that if you customize py-python-command previously, this value will override
what ipython.el does (because loading the customization variables comes later).
15
4 QUICK TIPS
4 Quick tips
IPython can be used as an improved replacement for the Python prompt, and for that you don’t
really need to read any more of this manual. But in this section we’ll try to summarize a few tips
on how to make the most effective use of it for everyday Python development, highlighting things
you might miss in the rest of the manual (which is getting long). We’ll give references to parts in
the manual which provide more detail when appropriate.
The following article by Jeremy Jones provides an introductory tutorial about IPython:
http://www.onlamp.com/pub/a/python/2005/01/27/ipython.html
• The TAB key. TAB-completion, especially for attributes, is a convenient way to explore the
structure of any object you’re dealing with. Simply type object_name.<TAB> and a list
of the object’s attributes will be printed (see sec. 6.5 for more). Tab completion also works
on file and directory names, which combined with IPython’s alias system allows you to do
from within IPython many of the things you normally would need the system shell for.
• Explore your objects. Typing object_name? will print all sorts of details about any object,
including docstrings, function definition lines (for call arguments) and constructor details
for classes. The magic commands %pdoc, %pdef, %psource and %pfile will respectively
print the docstring, function definition line, full source code and the complete file for any
object (when they can be found). If automagic is on (it is by default), you don’t need to type
the ’%’ explicitly. See sec. 6.4 for more.
• The %run magic command allows you to run any python script and load all of its data
directly into the interactive namespace. Since the file is re-read from disk each time, changes
you make to it are reflected immediately (in contrast to the behavior of import). I rarely
use import for code I am testing, relying on %run instead. See sec. 6.2 for more on this and
other magic commands, or type the name of any magic command and ? to get details on it.
See also sec. 6.9 for a recursive reload command.
%run also has special flags for timing the execution of your scripts (-t) and for executing
them under the control of either Python’s pdb debugger (-d) or profiler (-p). With all of
these, %run can be used as the main tool for efficient interactive development of code which
you write in your editor of choice.
• Use the Python debugger, pdb1 . The %pdb command allows you to toggle on and off the
automatic invocation of an IPython-enhanced pdb debugger (with coloring, tab completion
and more) at any uncaught exception. The advantage of this is that pdb starts inside the func-
tion where the exception occurred, with all data still available. You can print variables, see
code, execute statements and even walk up and down the call stack to track down the true
source of the problem (which often is many layers in the stack above where the exception
gets triggered).
Running programs with %run and pdb active can be an efficient to develop and debug code,
in many cases eliminating the need for print statements or external debugging tools. I of-
ten simply put a 1/0 in a place where I want to take a look so that pdb gets called, quickly
view whatever variables I need to or test various pieces of code and then remove the 1/0.
1
Thanks to Christian Hart and Matthew Arnison for the suggestions leading to IPython’s improved debugger and
profiler support.
16
4 QUICK TIPS
Note also that ‘%run -d’ activates pdb and automatically sets initial breakpoints for you to
step through your code, watch variables, etc. See Sec. 6.12 for details.
• Use the output cache. All output results are automatically stored in a global dictionary
named Out and variables named _1, _2, etc. alias them. For example, the result of input
line 4 is available either as Out[4] or as _4. Additionally, three variables named _, __ and
___ are always kept updated with the for the last three results. This allows you to recall any
previous result and further use it for new calculations. See Sec. 6.12 for more.
• Put a ’;’ at the end of a line to supress the printing of output. This is useful when doing
calculations which generate long output you are not interested in seeing. The _* variables
and the Out[] list do get updated with the contents of the output, even if it is not printed.
You can thus still access the generated results this way for further processing.
• A similar system exists for caching input. All input is stored in a global list called In , so
you can re-execute lines 22 through 28 plus line 34 by typing ’exec In[22:29]+In[34]’
(using Python slicing notation). If you need to execute the same set of lines often, you can
assign them to a macro with the %macro function. See sec. 6.11 for more.
• Use your input history. The %hist command can show you all previous input, without
line numbers if desired (option -n) so you can directly copy and paste code either back in
IPython or in a text editor. You can also save all your history by turning on logging via
%logstart; these logs can later be either reloaded as IPython sessions or used as code for
your programs.
• Define your own system aliases. Even though IPython gives you access to your system shell
via the ! prefix, it is convenient to have aliases to the system commands you use most often.
This allows you to work seamlessly from inside IPython with the same commands you are
used to in your system shell.
IPython comes with some pre-defined aliases and a complete system for changing directo-
ries, both via a stack (see %pushd, %popd and %dhist) and via direct %cd. The latter keeps
a history of visited directories and allows you to go to any previously visited one.
• Use Python to manipulate the results of system commands. The ‘!!’ special syntax, and the
%sc and %sx magic commands allow you to capture system output into Python variables.
• Expand python variables when calling the shell (either via ‘!’ and ‘!!’ or via aliases)
by prepending a $ in front of them. You can also expand complete python expressions. See
sec. 6.7 for more.
• Use profiles to maintain different configurations (modules to load, function definitions, op-
tion settings) for particular tasks. You can then have customized versions of IPython for
specific purposes. See sec. 7.3 for more.
• Embed IPython in your programs. A few lines of code are enough to load a complete IPython
inside your own programs, giving you the ability to work with your data interactively after
automatic processing has been completed. See sec. 9 for more.
• Use the Python profiler. When dealing with performance issues, the %run command with
a -p option allows you to run complete programs under the control of the Python profiler.
The %prun command does a similar job for single Python expressions (like function calls).
17
4.1 Source code handling tips 4 QUICK TIPS
• Use the IPython.demo.Demo class to load any Python script as an interactive demo. With a
minimal amount of simple markup, you can control the execution of the script, stopping as
needed. See sec. 14 for more.
IPython is a line-oriented program, without full control of the terminal. Therefore, it doesn’t
support true multiline editing. However, it has a number of useful tools to help you in dealing
effectively with more complex editing.
The %edit command gives a reasonable approximation of multiline editing, by invoking your
favorite editor on the spot. IPython will execute the code you type in there as if it were typed
interactively. Type %edit? for the full details on the edit command.
If you have typed various commands during a session, which you’d like to reuse, IPython pro-
vides you with a number of tools. Start by using %hist to see your input history, so you can see
the line numbers of all input. Let us say that you’d like to reuse lines 10 through 20, plus lines 24
and 28. All the commands below can operate on these with the syntax
%command 10-20 24 28
• %macro <macroname>: this stores the lines into a variable which, when called at the
prompt, re-executes the input. Macros can be edited later using ‘%edit macroname’, and
they can be stored persistently across sessions with ‘%store macroname’ (the storage sys-
tem is per-profile). The combination of quick macros, persistent storage and editing, allows
you to easily refine quick-and-dirty interactive input into permanent utilities, always avail-
able both in IPython and as files for general reuse.
• %edit: this will open a text editor with those lines pre-loaded for further modification. It
will then execute the resulting file’s contents as if you had typed it at the prompt.
• %save <filename>: this saves the lines directly to a named file on disk.
While %macro saves input lines into memory for interactive re-execution, sometimes you’d like
to save your input directly to a file. The %save magic does this: its input sytnax is the same as
%macro, but it saves your input directly to a Python file. Note that the %logstart command also
saves input, but it logs all input to disk (though you can temporarily suspend it and reactivate it
with %logoff/%logon); %save allows you to select which lines of input you need to save.
When you call %edit with no arguments, IPython opens an empty editor with a temporary file,
and it returns the contents of your editing session as a string variable. Thanks to IPython’s output
caching mechanism, this is automatically stored:
18
4 QUICK TIPS 4.2 Effective logging
In [1]: %edit
IPython will make a temporary file named: /tmp/ipython_edit_yR-HCN.py
Editing... done. Executing edited code...
hello - this is a temporary file
Out[1]: "print ’hello - this is a temporary file’\n"
Now, if you call ‘%edit -p’, IPython tries to open an editor with the same data as the last time
you used %edit. So if you haven’t used %edit in the meantime, this same contents will reopen;
however, it will be done in a new file. This means that if you make changes and you later want
to find an old version, you can always retrieve it by using its output number, via ‘%edit _NN’,
where NN is the number of the output prompt.
Continuing with the example above, this should illustrate this idea:
In [2]: edit -p
IPython will make a temporary file named: /tmp/ipython_edit_nA09Qk.py
Editing... done. Executing edited code...
hello - now I made some changes
Out[2]: "print ’hello - now I made some changes’\n"
In [3]: edit _1
IPython will make a temporary file named: /tmp/ipython_edit_gy6-zD.py
Editing... done. Executing edited code...
hello - this is a temporary file
IPython version control at work :)
Out[3]: "print ’hello - this is a temporary file’\nprint ’IPython version contr
This section was written after a contribution by Alexander Belchenko on the IPython user list.
include ipythonrc
# cancel earlier logfile invocation:
logfile ”
execute import time
execute __cmd = ’/Users/kern/research/logfiles/parkfield-%s.log rotate’
execute __IP.magic_logstart(__cmd % time.strftime(’%Y-%m-%d’))
19
5 COMMAND-LINE USE
Now I have a nice little directory with everything I ever type in, organized by project and date.
Contribute your own: If you have your own favorite tip on using IPython efficiently for a certain
task (especially things which can’t be done in the normal Python interpreter), don’t hesitate to
send it!
5 Command-line use
The following special options are ONLY valid at the beginning of the command line, and not later.
This is because they control the initial- ization of ipython itself, before the normal option-handling
mechanism is active.
-gthread, -qthread, -q4thread, -wthread, -pylab: Only one of these can be given,
and it can only be given as the first option passed to IPython (it will have no effect in
any other position). They provide threading support for the GTK, Qt (versions 3 and
4) and WXPython toolkits, and for the matplotlib library.
With any of the first four options, IPython starts running a separate thread for the
graphical toolkit’s operation, so that you can open and control graphical elements from
within an IPython command line, without blocking. All four provide essentially the
same functionality, respectively for GTK, Qt3, Qt4 and WXWidgets (via their Python
interfaces).
Note that with -wthread, you can additionally use the -wxversion option to request a
specific version of wx to be used. This requires that you have the wxversion Python
module installed, which is part of recent wxPython distributions.
If -pylab is given, IPython loads special support for the mat plotlib library (http:
//matplotlib.sourceforge.net), allowing interactive usage of any of its back-
ends as defined in the user’s ~/.matplotlib/matplotlibrc file. It automatically
activates GTK, Qt or WX threading for IPyhton if the choice of matplotlib backend re-
quires it. It also modifies the %run command to correctly execute (without blocking)
any matplotlib-based script which calls show() at the end.
20
5 COMMAND-LINE USE 5.2 Regular Options
-tk The -g/q/q4/wthread options, and -pylab (if matplotlib is configured to use GTK,
Qt3, Qt4 or WX), will normally block Tk graphical interfaces. This means that when
either GTK, Qt or WX threading is active, any attempt to open a Tk GUI will result in
a dead window, and possibly cause the Python interpreter to crash. An extra option,
-tk, is available to address this issue. It can only be given as a second option after any
of the above (-gthread, -wthread or -pylab).
If -tk is given, IPython will try to coordinate Tk threading with GTK, Qt or WX. This is
however potentially unreliable, and you will have to test on your platform and Python
configuration to determine whether it works for you. Debian users have reported suc-
cess, apparently due to the fact that Debian builds all of Tcl, Tk, Tkinter and Python
with pthreads support. Under other Linux environments (such as Fedora Core 2/3),
this option has caused random crashes and lockups of the Python interpreter. Under
other operating systems (Mac OSX and Windows), you’ll need to try it to find out,
since currently no user reports are available.
There is unfortunately no way for IPython to determine at run time whether -tk will
work reliably or not, so you will need to do some experiments before relying on it for
regular work.
After the above threading options have been given, regular options can follow in any order. All
options can be abbreviated to their shortest non-ambiguous form and are case-sensitive. One or
two dashes can be used. Some options have an alternate short form, indicated after a |.
Most options can also be set from your ipythonrc configuration file. See the provided example for
more details on what the options do. Options given at the command line override the values set
in the ipythonrc file.
All options with a [no] prepended can be specified in negated form (-nooption instead of
-option) to turn the feature off.
-pylab: this can only be given as the first option passed to IPython (it will have no ef-
fect in any other position). It adds special support for the matplotlib library
(http://matplotlib.sourceforge.net http://matplotlib.sourceforge.net), al-
lowing interactive usage of any of its backends as defined in the user’s
.matplotlibrc file. It automatically activates GTK or WX threading for IPyhton
if the choice of matplotlib backend requires it. It also modifies the %run command to
correctly execute (without blocking) any matplotlib-based script which calls show()
at the end. See Sec. 15 for more details.
-autocall <val>: Make IPython automatically call any callable object even if you didn’t type
explicit parentheses. For example, ‘str 43’ becomes ‘str(43)’ automatically. The value
can be ‘0’ to disable the feature, ‘1’ for smart autocall, where it is not applied if there
are no more arguments on the line, and ‘2’ for full autocall, where all callable objects
are automatically called (even if no arguments are present). The default is ‘1’.
21
5.2 Regular Options 5 COMMAND-LINE USE
-[no]automagic: make magic commands automatic (without needing their first character to
be %). Type %magic at the IPython prompt for more information.
-[no]autoedit_syntax: When a syntax error occurs after editing a file, automatically open
the file to the trouble causing line for convenient fixing.
-c <command>: execute the given command string, and set sys.argv to [’c’]. This is similar
to the -c option in the normal Python interpreter.
-cache_size|cs <n>: size of the output cache (maximum number of entries to hold in mem-
ory). The default is 1000, you can change it permanently in your config file. Setting it
to 0 completely disables the caching system, and the minimum value accepted is 20 (if
you provide a value less than 20, it is reset to 0 and a warning is issued) This limit is
defined because otherwise you’ll spend more time re-flushing a too small cache than
working.
-colors <scheme>: Color scheme for prompts and exception reporting. Currently imple-
mented: NoColor, Linux and LightBG.
-[no]color_info: IPython can display information about objects via a set of functions, and
optionally can use colors for this, syntax highlighting source code and various other
elements. However, because this information is passed through a pager (like ’less’) and
many pagers get confused with color codes, this option is off by default. You can test
it and turn it on permanently in your ipythonrc file if it works for you. As a reference,
the ’less’ pager supplied with Mandrake 8.2 works ok, but that in RedHat 7.2 doesn’t.
Test it and turn it on permanently if it works with your system. The magic function
%color_info allows you to toggle this interactively for testing.
-[no]debug: Show information about the loading process. Very useful to pin down problems
with your configuration files or to get details about session restores.
-[no]deep_reload: IPython can use the deep_reload module which reloads changes in
modules recursively (it replaces the reload() function, so you don’t need to change
anything to use it). deep_reload() forces a full reload of modules whose code may
have changed, which the default reload() function does not.
When deep_reload is off, IPython will use the normal reload(), but deep_reload will
still be available as dreload(). This feature is off by default [which means that you
have both normal reload() and dreload()].
-editor <name>: Which editor to use with the %edit command. By default, IPython will
honor your EDITOR environment variable (if not set, vi is the Unix default and notepad
the Windows one). Since this editor is invoked on the fly by IPython and is meant for
editing small code snippets, you may want to use a small, lightweight editor here (in
case your default EDITOR is something like Emacs).
22
5 COMMAND-LINE USE 5.2 Regular Options
-ipythondir <name>: name of your IPython configuration directory IPYTHONDIR. This can
also be specified through the environment variable IPYTHONDIR.
-log|l: generate a log file of all input. The file is named ipython_log.py in your current
directory (which prevents logs from multiple IPython sessions from trampling each
other). You can use this to later restore a session by loading your logfile as a file to be
executed with option -logplay (see below).
-logplay|lp <name>: you can replay a previous log. For restoring a session as close as possi-
ble to the state you left it in, use this option (don’t just run the logfile). With -logplay,
IPython will try to reconstruct the previous working environment in full, not just exe-
cute the commands in the logfile.
When a session is restored, logging is automatically turned on again with the name of
the logfile it was invoked with (it is read from the log header). So once you’ve turned
logging on for a session, you can quit IPython and reload it as many times as you want
and it will continue to log its history and restore from the beginning every time.
Caveats: there are limitations in this option. The history variables _i*,_* and _dh
don’t get restored properly. In the future we will try to implement full session saving
by writing and retrieving a ’snapshot’ of the memory state of IPython. But our first
attempts failed because of inherent limitations of Python’s Pickle module, so this may
have to wait.
-[no]messages: Print messages which IPython collects about its startup process (default on).
-[no]pdb: Automatically call the pdb debugger after every uncaught exception. If you are used
to debugging using pdb, this puts you automatically inside of it after any call (either
in IPython or in code called by it) which triggers an exception which goes uncaught.
-[no]pprint: ipython can optionally use the pprint (pretty printer) module for displaying re-
sults. pprint tends to give a nicer display of nested data structures. If you like it, you
can turn it on permanently in your config file (default off).
-profile|p <name>: assume that your config file is ipythonrc-<name> (looks in current dir
first, then in IPYTHONDIR). This is a quick way to keep and load multiple config files
for different tasks, especially if you use the include option of config files. You can keep
a basic IPYTHONDIR/ipythonrc file and then have other ’profiles’ which include
this one and load extra things for particular tasks. For example:
Since it is possible to create an endless loop by having circular file inclusions, IPython
will stop if it reaches 15 recursive inclusions.
23
5.2 Regular Options 5 COMMAND-LINE USE
-prompt_in1|pi1 <string>: Specify the string used for input prompts. Note that if you are
using numbered prompts, the number is represented with a ’\#’ in the string. Don’t
forget to quote strings with spaces embedded in them. Default: ’In [\#]:’. Sec. 7.2
discusses in detail all the available escapes to customize your prompts.
-prompt_in2|pi2 <string>: Similar to the previous option, but used for the continuation
prompts. The special sequence ’\D’ is similar to ’\#’, but with all digits replaced dots
(so you can have your continuation prompt aligned with your input prompt). Default:
’ .\D.:’ (note three spaces at the start for alignment with ’In [\#]’).
-prompt_out|po <string>: String used for output prompts, also uses numbers like
prompt_in1. Default: ’Out[\#]:’
-quick: start in bare bones mode (no config file loaded).
-rcfile <name>: name of your IPython resource configuration file. Normally IPython loads
ipythonrc (from current directory) or IPYTHONDIR/ipythonrc.
If the loading of your config file fails, IPython starts with a bare bones configuration
(no modules loaded at all).
-[no]readline: use the readline library, which is needed to support name completion and com-
mand history, among other things. It is enabled by default, but may cause problems
for users of X/Emacs in Python comint or shell buffers.
Note that X/Emacs ’eterm’ buffers (opened with M-x term) support IPython’s read-
line and syntax coloring fine, only ’emacs’ (M-x shell and C-c !) buffers do not.
-screen_length|sl <n>: number of lines of your screen. This is used to control printing of
very long strings. Strings longer than this number of lines will be sent through a pager
instead of directly printed.
The default value for this is 0, which means IPython will auto-detect your screen size
every time it needs to print certain potentially long strings (this doesn’t change the be-
havior of the ’print’ keyword, it’s only triggered internally). If for some reason this isn’t
working well (it needs curses support), specify it yourself. Otherwise don’t change the
default.
-separate_in|si <string>: separator before input prompts. Default: ’\n’
-separate_out|so <string>: separator before output prompts. Default: nothing.
-separate_out2|so2 <string>: separator after output prompts. Default: nothing.
For these three options, use the value 0 to specify no separator.
-nosep: shorthand for ’-SeparateIn 0 -SeparateOut 0 -SeparateOut2 0’. Simply
removes all input/output separators.
-upgrade: allows you to upgrade your IPYTHONDIR configuration when you install a new ver-
sion of IPython. Since new versions may include new command line options or exam-
ple files, this copies updated ipythonrc-type files. However, it backs up (with a .old
extension) all files which it overwrites so that you can merge back any customizations
you might have in your personal files.
24
6 INTERACTIVE USE
Context: prints 5 lines of context source code around each line in the traceback.
Verbose: similar to Context, but additionally prints the variables currently visible
where the exception happened (shortening their strings if too long). This can poten-
tially be very slow, if you happen to have a huge data structure whose string represen-
tation is complex to compute. Your computer may appear to freeze for a while with
cpu usage at 100%. If this occurs, you can cancel the traceback with Ctrl-C (maybe
hitting it more than once).
6 Interactive use
Warning: IPython relies on the existence of a global variable called __IP which controls the shell
itself. If you redefine __IP to anything, bizarre behavior will quickly occur.
Other than the above warning, IPython is meant to work as a drop-in replacement for the standard
interactive interpreter. As such, any code which is valid python should execute normally under
IPython (cases where this is not true should be reported as bugs). It does, however, offer many
features which are not available at a standard python prompt. What follows is a list of these.
Windows, unfortunately, uses the ‘\’ character as a path separator. This is a terrible choice, be-
cause ‘\’ also represents the escape character in most modern programming languages, including
Python. For this reason, issuing many of the commands discussed below (especially magics which
affect the filesystem) with ‘\’ in them will cause strange errors.
A partial solution is to use instead the ‘/’ character as a path separator, which Windows recognizes
in most situations. However, in Windows commands ‘/’ flags options, so you can not use it for the
root directory. This means that paths beginning at the root must be typed in a contrived manner
like:
%copy \opt/foo/bar.txt \tmp
There is no sensible thing IPython can do to truly work around this flaw in Windows2 .
2
If anyone comes up with a clean solution which works consistently and does not negatively impact other platforms
at all, I’ll gladly accept a patch.
25
6.2 Magic command system 6 INTERACTIVE USE
IPython will treat any line whose first character is a % as a special call to a ’magic’ function. These
allow you to control the behavior of IPython itself, plus a lot of system-type features. They are all
prefixed with a % character, but parameters are given without parentheses or quotes.
Example: typing ’%cd mydir’ (without the quotes) changes you working directory to ’mydir’,
if it exists.
If you have ’automagic’ enabled (in your ipythonrc file, via the command line option
-automagic or with the %automagic function), you don’t need to type in the % explicitly.
IPython will scan its internal list of magic functions and call one if it exists. With automagic
on you can then just type ’cd mydir’ to go to directory ’mydir’. The automagic system has the
lowest possible precedence in name searches, so defining an identifier with the same name as an
existing magic function will shadow it for automagic use. You can still access the shadowed magic
function by explicitly using the % character at the beginning of the line.
An example (with automagic on) should clarify all this:
You can define your own magic functions to extend the system. The following example defines a
new magic command, %impall:
import IPython.ipapi
ip = IPython.ipapi.get()
def doimp(self, arg):
ip = self.api
ip.ex("import %s; reload(%s); from %s import *" % (
arg,arg,arg)
)
ip.expose_magic(’impall’, doimp)
You can also define your own aliased names for magic functions. In your ipythonrc file, placing
a line like:
26
6 INTERACTIVE USE 6.2 Magic command system
The rest of this section is automatically generated for each release from the docstrings in the
IPython code. Therefore the formatting is somewhat minimal, but this method has the advan-
tage of having information always in sync with the code.
A list of all the magic commands available in IPython’s default installation follows. This is similar
to what you’ll see by simply typing %magic at the prompt, but that will also give you information
about magic commands you may have added as part of your personal customizations.
27
6.2 Magic command system 6 INTERACTIVE USE
Aliases expand Python variables just like system calls using ! or !! do: all expres-
sions prefixed with ’$’ get expanded. For details of the semantic rules, see PEP-215:
http://www.python.org/peps/pep-0215.html. This is the library used by IPython for variable
expansion. If you want to access a true shell variable, an extra $ is necessary to prevent its expan-
sion by IPython:
In [6]: alias show echo
In [7]: PATH=’A Python string’
In [8]: show $PATH
A Python string
In [9]: show $$PATH
/usr/local/lf9560/bin:/usr/local/intel/compiler70/ia32/bin:...
You can use the alias facility to acess all of $PATH. See the %rehash and %rehashx functions,
which automatically create aliases for the contents of your $PATH.
If called with no parameters, %alias prints the current alias table.
%automagic: Make magic functions callable without having to type the initial %.
Without argumentsl toggles on/off (when off, you must call it as %automagic, of course). With
arguments it sets the value, and you can use any of (case insensitive):
- on,1,True: to activate
- off,0,False: to deactivate.
Note that magic functions have lowest priority, so if there’s a variable whose name collides with
that of a magic fn, automagic won’t work for that function (you get the variable instead). However,
if you delete the variable (del var), the previously shadowed magic function becomes visible to
automagic again.
28
6 INTERACTIVE USE 6.2 Magic command system
IPython has a job manager, accessible via the ’jobs’ object. You can type jobs? to get more in-
formation about it, and use jobs.<TAB> to see its attributes. All attributes not starting with an
underscore are meant for public use.
In particular, look at the jobs.new() method, which is used to create new jobs. This magic %bg
function is just a convenience wrapper around jobs.new(), for expression-based jobs. If you want
to create a new job with an explicit function object and arguments, you must call jobs.new() di-
rectly.
The jobs.new docstring also describes in detail several important caveats associated with a thread-
based model for background job execution. Type jobs.new? for details.
You can check the status of all jobs with jobs.status().
The jobs variable is set by IPython into the Python builtin namespace. If you ever declare a variable
named ’jobs’, you will shadow this name. You can either delete your global jobs variable to regain
access to the job manager, or make a new name and assign it manually to the manager (stored in
IPython’s namespace). For example, to assign the job manager to the Jobs name, use:
Jobs = __builtins__.jobs
29
6.2 Magic command system 6 INTERACTIVE USE
%colors: Switch color scheme for prompts, info system and exception handlers.
Currently implemented schemes: NoColor, Linux, LightBG.
Color scheme names are not case-sensitive.
%cpaste: Allows you to paste & execute a pre-formatted code block from clipboard
You must terminate the block with ’–’ (two minus-signs) alone on the line. You can also provide
your own sentinel with ’%paste -s %%’ (’%%’ is the new sentinel for this operation)
The block is dedented prior to execution to enable execution of method definitions. ’>’ characters
at the beginning of a line is ignored, to allow pasting directly from e-mails. The executed block is
also assigned to variable named ’pasted_block’ for later editing with ’%edit pasted_block’.
You can also pass a variable name as an argument, e.g. ’%cpaste foo’. This assigns the pasted
block to variable ’foo’ as string, without dedenting or executing it.
Do not be alarmed by garbled output on Windows (it’s a readline bug). Just press enter and type
– (and press enter again) and the block will be what was just pasted.
IPython statements (magics, shell escapes) are not supported (yet).
This history is automatically maintained by the %cd command, and always available as the global
list variable _dh. You can use %cd -<n> to go to directory number <n>.
30
6 INTERACTIVE USE 6.2 Magic command system
31
6.2 Magic command system 6 INTERACTIVE USE
Note: opening at an exact line is only supported under Unix, and some editors (like kedit and
gedit up to Gnome 2.8) do not understand the ’+NUMBER’ parameter necessary for this feature.
Good editors like (X)Emacs, vi, jed, pico and joe all do.
- If the argument is not found as a variable, IPython will look for a file with that name (adding .py
if necessary) and load it into the editor. It will execute its contents with execfile() when you exit,
loading any code in the file into your interactive namespace.
After executing your code, %edit will return as output the code you typed in the editor (except
when it was an existing file). This way you can reload the code in further invocations of %edit as
a variable, via _<NUMBER> or Out[<NUMBER>], where <NUMBER> is the prompt number of
the output.
Note that %edit is also available through the alias %ed.
This is an example of creating a simple function inside the editor and then modifying it. First, start
up the editor:
In [1]: ed
Editing... done. Executing edited code...
Out[1]: ’def foo():\n print "foo() was defined in an editing session"\n’
We can then call the function foo():
In [2]: foo()
foo() was defined in an editing session
Now we edit foo. IPython automatically loads the editor with the (temporary) file where foo()
was previously defined:
In [3]: ed foo
Editing... done. Executing edited code...
And if we call foo() again we get the modified version:
In [4]: foo()
foo() has now been changed!
Here is an example of how to edit a code snippet successive times. First we call the editor:
In [8]: ed
Editing... done. Executing edited code...
hello
Out[8]: "print ’hello’\n"
Now we call it again with the previous output (stored in _):
In [9]: ed _
Editing... done. Executing edited code...
hello world
Out[9]: "print ’hello world’\n"
Now we call it with the output #8 (stored in _8, also as Out[8]):
In [10]: ed _8
Editing... done. Executing edited code...
hello again
Out[10]: "print ’hello again’\n"
32
6 INTERACTIVE USE 6.2 Magic command system
%history: Print input history (_i<n> variables), with most recent last.
%history -> print at most 40 inputs (some may be multi-line)
%history n -> print at most n inputs
%history n1 n2 -> print inputs between n1 and n2 (n2 not included)
Each input’s number <n> is shown, and is accessible as the automatically generated variable
_i<n>. Multi-line statements are printed starting at a new line for easy copy/paste.
Options:
-n: do NOT print line numbers. This is useful if you want to get a printout of many lines which
can be directly pasted into a text editor.
This feature is only available if numbered prompts are in use.
-r: print the ’raw’ history. IPython filters your input and converts it all into valid Python source
before executing it (things like magics or aliases are turned into function calls, for example). With
this option, you’ll see the unfiltered history instead of the filtered version: ’%cd /’ will be seen as
’%cd /’ instead of ’_ip.magic("%cd /")’.
33
6.2 Magic command system 6 INTERACTIVE USE
If no name is given, it defaults to a file named ’ipython_log.py’ in your current directory, in ’rotate’
mode (see below).
’%logstart name’ saves to file ’name’ in ’backup’ mode. It saves your history up to that point
and then continues logging.
%logstart takes a second optional parameter: logging mode. This can be one of (note that the
modes are given unquoted):
append: well, that says it.
backup: rename (if exists) to name and start name.
global: single logfile in your home dir, appended to.
over : overwrite existing log.
rotate: create rotating logs name.1 , name.2 , etc.
Options:
-o: log also IPython’s output. In this mode, all commands which generate an Out[NN] prompt
are recorded to the logfile, right after their corresponding input line. The output lines are always
prepended with a ’#[Out]# ’ marker, so that the log remains valid Python code.
Since this marker is always the same, filtering only the output from a log is very easy, using for
example a simple awk call:
awk -F’#
Out
# ’ ’if($2) print $2’ ipython_log.py
-r: log ’raw’ input. Normally, IPython’s logs contain the processed input, so that user lines
are logged in their final form, converted into valid Python. For example, %Exit is logged as
’_ip.magic("Exit"). If the -r flag is given, all input is logged exactly as typed, with no transforma-
tions applied.
-t: put timestamps before each input line logged (these are put in comments).
34
6 INTERACTIVE USE 6.2 Magic command system
The notation for indicating number ranges is: n1-n2 means ’use line numbers n1,...n2’ (the end-
point is included). That is, ’5-7’ means using the lines numbered 5,6 and 7.
Note: as a ’hidden’ feature, you can also use traditional python slice notation, where N:M means
numbers N through M-1.
For example, if your history contains (%hist prints it):
44: x=1
45: y=3
46: z=x+y
47: print x
48: a=5
49: print ’x’,x,’y’,y
you can create a macro with lines 44 through 47 (included) and line 49 called my_macro with:
In [51]: %macro my_macro 44-47 49
Now, typing ‘my_macro‘ (without quotes) will re-execute all this code in one pass.
You don’t need to give the line-numbers in order, and any given line number can appear multiple
times. You can assemble macros with any lines from your input history in any order.
The macro is a simple object which holds its value in an attribute, but IPython’s display system
checks for macros and executes them as code instead of printing them when you type their name.
You can view a macro’s contents by explicitly printing it with:
’print macro_name’.
For one-off cases which DON’T contain magic function calls in them you can obtain similar results
by explicitly executing slices from your input history with:
In [60]: exec In[44:48]+In[49]
35
6.2 Magic command system 6 INTERACTIVE USE
The initial state of this feature is set in your ipythonrc configuration file (the variable is called
’pdb’).
If you want to just activate the debugger AFTER an exception has fired, without having to type
’%pdb on’ and rerunning your code, you can use the %debug magic.
%pfile: Print (or run through pager) the file where an object is defined.
The file opens at the line where the object definition begins. IPython will honor the environment
variable PAGER if set, and otherwise will do its best to print the file in a convenient form.
If the given argument is not an object currently defined, IPython will try to interpret it as a file-
name (automatically adding a .py extension if needed). You can thus use %pfile as a syntax
highlighting code viewer.
36
6 INTERACTIVE USE 6.2 Magic command system
You can combine several limits with repeated use of the option. For example, ’-l __init__ -l 5’ will
print only the topmost 5 lines of information about class constructors.
-r: return the pstats.Stats object generated by the profiling. This object has all the information
about the profile in it, and you can later use it for further analysis or in other functions.
-s <key>: sort profile by given key. You can provide more than one key by using the option several
times: ’-s key1 -s key2 -s key3...’. The default sorting key is ’time’.
The following is copied verbatim from the profile documentation referenced below:
When more than one key is provided, additional keys are used as secondary criteria when the
there is equality in all keys selected before them.
Abbreviations can be used for any key names, as long as the abbreviation is unambiguous. The
following are the keys currently defined:
Valid Arg Meaning
"calls" call count
"cumulative" cumulative time
"file" file name
"module" file name
"pcalls" primitive call count
"line" line number
"name" function name
"nfl" name/file/line
"stdname" standard name
"time" internal time
Note that all sorts on statistics are in descending order (placing most time consuming items first),
where as name, file, and line number searches are in ascending order (i.e., alphabetical). The subtle
distinction between "nfl" and "stdname" is that the standard name is a sort of the name as printed,
which means that the embedded line numbers get compared in an odd way. For example, lines 3,
20, and 40 would (if the file names were the same) appear in the string order "20" "3" and "40". In
contrast, "nfl" does a numeric compare of the line numbers. In fact, sort_stats("nfl") is the same as
sort_stats("name", "file", "line").
-T <filename>: save profile results as shown on screen to a text file. The profile is still shown on
screen.
-D <filename>: save (via dump_stats) profile statistics to given filename. This data is in a format
understod by the pstats module, and is generated by a call to the dump_stats() method of profile
objects. The profile is still shown on screen.
If you want to run complete programs under the profiler’s control, use ’%run -p [prof_opts] file-
name.py [args to program]’ where prof_opts contains profiler specific options as described here.
You can read the complete documentation for the profile module with:
In [1]: import profile; profile.help()
37
6.2 Magic command system 6 INTERACTIVE USE
Note: ? can be used as a synonym for %psearch, at the beginning or at the end: both a*? and ?a*
are equivalent to ’%psearch a*’. Still, the rest of the command line must be unchanged (options
come first), so for example the following forms are equivalent
%psearch -i a* function -i a* function? ?-i a* function
Arguments:
PATTERN
where PATTERN is a string containing * as a wildcard similar to its use in a shell. The pattern is
matched in all namespaces on the search path. By default objects starting with a single _ are not
matched, many IPython generated objects have a single underscore. The default is case insensitive
matching. Matching is also done on the attributes of objects and not only on the objects in a
module.
[OBJECT TYPE]
Is the name of a python type from the types module. The name is given in lowercase without the
ending type, ex. StringType is written string. By adding a type here only objects matching the
given type are matched. Using all here makes the pattern match all types (this is the default).
Options:
-a: makes the pattern match even objects whose names start with a single underscore. These
names are normally ommitted from the search.
-i/-c: make the pattern case insensitive/sensitive. If neither of these options is given, the default is
read from your ipythonrc file. The option name which sets this value is ’wildcards_case_sensitive’.
If this option is not specified in your ipythonrc file, IPython’s internal default is to do a case
sensitive search.
-e/-s NAMESPACE: exclude/search a given namespace. The pattern you specifiy can be searched
in any of the following namespaces: ’builtin’, ’user’, ’user_global’,’internal’, ’alias’, where ’builtin’
and ’user’ are the search defaults. Note that you should not use quotes when specifying names-
paces.
’Builtin’ contains the python module builtin, ’user’ contains all user data, ’alias’ only contain the
shell aliases and no python objects, ’internal’ contains objects used by IPython. The ’user_global’
namespace is only used by embedded IPython instances, and it contains module-level globals.
You can add namespaces to the search with -s or exclude them with -e (these options can be given
more than once).
Examples:
%psearch a* -> objects beginning with an a %psearch -e builtin a* -> objects NOT in the builtin
space starting in a %psearch a* function -> all functions beginning with an a %psearch re.e* ->
objects beginning with an e in module re %psearch r*.e* -> objects that start with e in modules
starting in r %psearch r*.* string -> all strings in modules beginning with r
Case sensitve search:
%psearch -c a* list all object beginning with lower case a
Show objects beginning with a single _:
%psearch -a _* list objects beginning with a single underscore
38
6 INTERACTIVE USE 6.2 Magic command system
%psource: Print (or run through pager) the source code for an object.
%rehashx: Update the alias table with all executable files in $PATH.
This version explicitly checks that every entry in $PATH is a file with execute access (os.X_OK), so
it is much slower than %rehash.
Under Windows, it checks executability as a match agains a ’|’-separated string of extensions,
stored in the IPython config variable win_exec_ext. This defaults to ’exe|com|bat’.
This function also resets the root module cache of module completer, used on slow filesystems.
%reset: Resets the namespace by removing all names defined by the user.
Input/Output history are left around in case you need them.
39
6.2 Magic command system 6 INTERACTIVE USE
Parameters after the filename are passed as command-line arguments to the program (put in
sys.argv). Then, control returns to IPython’s prompt.
This is similar to running at a system prompt:
$ python file args
but with the advantage of giving you IPython’s tracebacks, and of loading all variables into your
interactive namespace for further use (unless -p is used, see below).
The file is executed in a namespace initially consisting only of __name__==’__main__’ and
sys.argv constructed as indicated. It thus sees its environment as if it were being run as a stand-
alone program. But after execution, the IPython interactive namespace gets updated with all vari-
ables defined in the program (except for __name__ and sys.argv). This allows for very convenient
loading of code for interactive work, while giving each program a ’clean sheet’ to run in.
Options:
-n: __name__ is NOT set to ’__main__’, but to the running file’s name without extension (as python
does under import). This allows running scripts and reloading the definitions in them without
calling code protected by an ’ if __name__ == "__main__" ’ clause.
-i: run the file in IPython’s namespace instead of an empty one. This is useful if you are experi-
menting with code written in a text editor which depends on variables defined interactively.
-e: ignore sys.exit() calls or SystemExit exceptions in the script being run. This is particularly
useful if IPython is being used to run unittests, which always exit with a sys.exit() call. In such
cases you are interested in the output of the test results, not in seeing a traceback of the unittest
module.
-t: print timing information at the end of the run. IPython will give you an estimated CPU
time consumption for your script, which under Unix uses the resource module to avoid the
wraparound problems of time.clock(). Under Unix, an estimate of time spent on system tasks
is also given (for Windows platforms this is reported as 0.0).
If -t is given, an additional -N<N> option can be given, where <N> must be an integer indicating
how many times you want the script to run. The final timing report will include total and per run
results.
For example (testing the script uniq_stable.py):
In [1]: run -t uniq_stable
IPython CPU timings (estimated):
User : 0.19597 s.
System: 0.0 s.
40
6 INTERACTIVE USE 6.2 Magic command system
pdb.run(’execfile("YOURFILENAME")’)
with a breakpoint set on line 1 of your file. You can change the line number for this automatic
breakpoint to be <N> by using the -bN option (where N must be an integer). For example:
%run -d -b40 myscript
will set the first breakpoint at line 40 in myscript.py. Note that the first breakpoint must be set on
a line which actually does something (not a comment or docstring) for it to stop execution.
When the pdb debugger starts, you will see a (Pdb) prompt. You must first enter ’c’ (without
qoutes) to start execution up to the first breakpoint.
Entering ’help’ gives information about the use of the debugger. You can easily see pdb’s full
documentation with "import pdb;pdb.help()" at a prompt.
-p: run program under the control of the Python profiler module (which prints a detailed report
of execution times, function calls, etc).
You can pass other options after -p which affect the behavior of the profiler itself. See the docs for
%prun for details.
In this mode, the program’s variables do NOT propagate back to the IPython interactive names-
pace (because they remain in the namespace where the profiler executes them).
Internally this triggers a call to %prun, see its documentation for details on the options available
specifically for profiling.
There is one special usage for which the text above doesn’t apply: if the filename ends with .ipy,
the file is run as ipython script, just as if the commands were written on IPython prompt.
41
6.2 Magic command system 6 INTERACTIVE USE
It adds a ’.py’ extension to the file if you don’t do so yourself, and it asks for confirmation before
overwriting existing files.
%sc: Shell capture - execute a shell command and capture its output.
DEPRECATED. Suboptimal, retained for backwards compatibility.
You should use the form ’var = !command’ instead. Example:
"%sc -l myfiles = ls " should now be written as
"myfiles = !ls "
myfiles.s, myfiles.l and myfiles.n still apply as documented below.
– %sc [options] varname=command
IPython will run the given command using commands.getoutput(), and will then update the
user’s interactive namespace with a variable called varname, containing the value of the call. Your
command can contain shell wildcards, pipes, etc.
The ’=’ sign in the syntax is mandatory, and the variable name you supply must follow Python’s
standard conventions for valid names.
(A special format without variable name exists for internal use)
Options:
-l: list output. Split the output on newlines into a list before assigning it to the given variable. By
default the output is stored as a single string.
-v: verbose. Print the contents of the variable.
In most cases you should not need to split as a list, because the returned value is a special type
of string which can automatically provide its contents either as a list (split on newlines) or as a
space-separated string. These are convenient, respectively, either for sequential processing or to
be passed to a shell command.
For example:
# Capture into variable a In [9]: sc a=ls *py
# a is a string with embedded newlines In [10]: a Out[10]: ’setup.py
win32_manual_post_install.py’
# which can be seen as a list: In [11]: a.l Out[11]: [’setup.py’, ’win32_manual_post_install.py’]
# or as a whitespace-separated string: In [12]: a.s Out[12]: ’setup.py
win32_manual_post_install.py’
# a.s is useful to pass as a single command line: In [13]: !wc -l $a.s 146 setup.py 130
win32_manual_post_install.py 276 total
# while the list form is useful to loop over: In [14]: for f in a.l: ....: !wc -l $f ....: 146 setup.py 130
win32_manual_post_install.py
Similiarly, the lists returned by the -l option are also special, in the sense that you can equally
invoke the .s attribute on them to automatically get a whitespace-separated string from their con-
tents:
42
6 INTERACTIVE USE 6.2 Magic command system
%sx: Shell execute - run a shell command and capture its output.
%sx command
IPython will run the given command using commands.getoutput(), and return the result format-
ted as a list (split on ’\n’). Since the output is _returned_, it will be stored in ipython’s regular
output cache Out[N] and in the ’_N’ automatic variables.
Notes:
1) If an input line begins with ’!!’, then %sx is automatically invoked. That is, while: !ls causes
ipython to simply issue system(’ls’), typing !!ls is a shorthand equivalent to: %sx ls
2) %sx differs from %sc in that %sx automatically splits into a list, like ’%sc -l’. The reason for this
is to make it as easy as possible to process line-oriented shell output via further python commands.
%sc is meant to provide much finer control, but requires more typing.
3) Just like %sc -l, this is a list with special attributes:
.l (or .list) : value as list. .n (or .nlstr): value as newline-separated string. .s (or .spstr): value as
whitespace-separated string.
This is very useful when trying to use such lists as arguments to system commands.
43
6.2 Magic command system 6 INTERACTIVE USE
In [4]: time print ’hello world’ hello world CPU times: user 0.00 s, sys: 0.00 s, total: 0.00 s Wall
time: 0.00
44
6 INTERACTIVE USE 6.3 Access to the standard Python help
will only list functions and strings, excluding all other types of variables. To find the proper
type names, simply use type(var) at a command line to see how python prints type names. For
example:
In [1]: type(’hello’)
Out[1]: <type ’str’>
indicates that the type name for strings is ’str’.
%who always excludes executed names loaded through your configuration file and things which
are internal to IPython.
This is deliberate, as typically you may load many modules and the purpose of %who is to show
you only what you’ve manually defined.
%whos: Like %who, but gives some extra information about each variable.
The same type filtering of %who can be applied here.
For all variables, the type is printed. Additionally it prints:
- For ,[],(): their length.
- For numpy and Numeric arrays, a summary with shape, number of elements, typecode and size
in memory.
- Everything else: a string representation, snipping their middle if too long.
As of Python 2.1, a help system is available with access to object docstrings and the Python man-
uals. Simply type ’help’ (no quotes) to access it. You can also type help(object) to obtain
information about a given object, and help(’keyword’) for information on a keyword. As
noted in sec. 3.1, you need to properly configure your environment variable PYTHONDOCS for this
feature to work correctly.
Typing ?word or word? prints detailed information about an object. If certain strings in the object
are too long (docstrings, code, etc.) they get snipped in the center for brevity. This system gives
access variable types and values, full source code for any object (if available), function prototypes
and other useful information.
45
6.5 Readline-based features 6 INTERACTIVE USE
Typing ??word or word?? gives access to the full information without snipping long strings.
Long strings are sent to the screen through the less pager if longer than the screen and printed
otherwise. On systems lacking the less command, IPython uses a very basic internal pager.
The following magic functions are particularly useful for gathering information about your work-
ing environment. You can get more details by typing %magic or querying them individually (use
%function_name? with or without the %), this is just a summary:
%pdoc <object>: Print (or run through a pager if too long) the docstring for an object. If the
given object is a class, it will print both the class and the constructor docstrings.
%pdef <object>: Print the definition header for any callable object. If the object is a class, print
the constructor information.
%psource <object>: Print (or run through a pager if too long) the source code for an object.
%pfile <object>: Show the entire source file where an object was defined via a pager, opening
it at the line where the object definition begins.
%who/%whos: These functions give information about identifiers you have defined interactively
(not things you loaded or defined in your configuration files). %who just prints a list of
identifiers and %whos prints a table with some basic details about each identifier.
Note that the dynamic object information functions (?/??, %pdoc, %pfile, %pdef,
%psource) give you access to documentation even on things which are not really defined
as separate identifiers. Try for example typing {}.get? or after doing import os, type
os.path.abspath??.
These features require the GNU readline library, so they won’t work if your Python installation
lacks readline support. We will first describe the default behavior IPython uses, and then how to
change it to suit your preferences.
At any time, hitting TAB will complete any available python commands or variable names, and
show you a list of the possible completions if there’s no unambiguous one. It will also complete
filenames in the current directory if no python names match what you’ve typed so far.
IPython provides two ways for searching through previous input and thus reduce the need for
repetitive typing:
1. Start typing, and then use Ctrl-p (previous,up) and Ctrl-n (next,down) to search through
only the history items that match what you’ve typed so far. If you use Ctrl-p/Ctrl-n at
a blank prompt, they just behave like normal arrow keys.
46
6 INTERACTIVE USE 6.5 Readline-based features
2. Hit Ctrl-r: opens a search prompt. Begin typing and the system searches your history for
lines that contain what you’ve typed so far, completing as much as it can.
IPython will save your input history when it leaves and reload it next time you restart it. By
default, the history file is named $IPYTHONDIR/history, but if you’ve loaded a named profile,
’-PROFILE_NAME’ is appended to the name. This allows you to keep separate histories related
to various tasks: commands related to numerical work will not be clobbered by a system shell
history, for example.
6.5.4 Autoindent
IPython can recognize lines ending in ’:’ and indent the next line, while also un-indenting auto-
matically after ’raise’ or ’return’.
This feature uses the readline library, so it will honor your ~/.inputrc configuration (or what-
ever file your INPUTRC variable points to). Adding the following lines to your .inputrc file can
make indenting/unindenting more convenient (M-i indents, M-u unindents):
$if Python
"\M-i": " "
"\M-u": "\d\d\d\d"
$endif
Note that there are 4 spaces between the quote marks after "M-i" above.
Warning: this feature is ON by default, but it can cause problems with the pasting of multi-line
indented code (the pasted code gets re-indented on each line). A magic function %autoindent al-
lows you to toggle it on/off at runtime. You can also disable it permanently on in your ipythonrc
file (set autoindent 0).
All these features are based on the GNU readline library, which has an extremely customizable
interface. Normally, readline is configured via a file which defines the behavior of the library;
the details of the syntax for this can be found in the readline documentation available with your
system or on the Internet. IPython doesn’t read this file (if it exists) directly, but it does support
passing to readline valid options via a simple interface. In brief, you can customize readline by
setting the following options in your ipythonrc configuration file (note that these options can
not be specified at the command line):
readline_parse_and_bind: this option can appear as many times as you want, each time
defining a string to be executed via a readline.parse_and_bind() command. The
syntax for valid commands of this kind can be found by reading the documentation for
the GNU readline library, as these commands are of the kind which readline accepts in
its configuration file.
47
6.6 Session logging and restoring 6 INTERACTIVE USE
This option is off by default so that new users see all attributes of any objects they are
dealing with.
You will find the default values along with a corresponding detailed explanation in your
ipythonrc file.
You can log all input from a session either by starting IPython with the command line switches
-log or -logfile (see sec. 5.2)or by activating the logging at any moment with the magic func-
tion %logstart.
Log files can later be reloaded with the -logplay option and IPython will attempt to ’replay’ the
log by executing all the lines in it, thus restoring the state of a previous session. This feature is not
quite perfect, but can still be useful in many cases.
The log files can also be used as a way to have a permanent record of any code you wrote while
experimenting. Log files are regular text files which you can later open in your favorite text editor
to extract code or to ’clean them up’ before using them to replay a session.
The %logstart function for activating logging in mid-session is used as follows:
%logstart [log_name [log_mode]]
If no name is given, it defaults to a file named ’log’ in your IPYTHONDIR directory, in
’rotate’ mode (see below).
’%logstart name’ saves to file ’name’ in ’backup’ mode. It saves your history up to that
point and then continues logging.
%logstart takes a second optional parameter: logging mode. This can be one of (note that the
modes are given unquoted):
48
6 INTERACTIVE USE 6.7 System shell access
The %logoff and %logon functions allow you to temporarily stop and resume logging to a file
which had previously been started with %logstart. They will fail (with an explanation) if you
try to use them before logging has been started.
Any input line beginning with a ! character is passed verbatim (minus the !, of course) to the
underlying operating system. For example, typing !ls will run ’ls’ in the current directory.
If the input line begins with two exclamation marks, !!, the command is executed but its output
is captured and returned as a python list, split on newlines. Any output sent by the subprocess to
standard error is printed separately, so that the resulting list only captures standard output. The
!! syntax is a shorthand for the %sx magic command.
Finally, the %sc magic (short for ‘shell capture’) is similar to %sx, but allowing more fine-grained
control of the capture details, and storing the result directly into a named variable.
See Sec. 6.2 for details on the magics %sc and %sx, or use IPython’s own help (sc? and sx?) for
further details.
IPython also allows you to expand the value of python variables when making system calls. Any
python variable or expression which you prepend with $ will get expanded before the system call
is made.
In [1]: pyvar=’Hello world’
In [2]: !echo "A python variable: $pyvar"
A python variable: Hello world
If you want the shell to actually see a literal $, you need to type it twice:
In [3]: !echo "A system variable: $$HOME"
A system variable: /home/fperez
You can pass arbitrary expressions, though you’ll need to delimit them with {} if there is ambi-
guity as to the extent of the expression:
In [5]: x=10
In [6]: y=20
In [13]: !echo $x+y
10+y
In [7]: !echo ${x+y}
30
Even object attributes can be expanded:
In [12]: !echo $sys.argv
[/home/fperez/usr/bin/ipython]
49
6.8 System command aliases 6 INTERACTIVE USE
The %alias magic function and the alias option in the ipythonrc configuration file allow
you to define magic functions which are in fact system shell commands. These aliases can have
parameters.
’%alias alias_name cmd’ defines ’alias_name’ as an alias for ’cmd’
Then, typing ’%alias_name params’ will execute the system command ’cmd params’ (from
your underlying operating system).
You can also define aliases with parameters using %s specifiers (one per parameter). The following
example defines the %parts function as an alias to the command ’echo first %s second %s’
where each %s will be replaced by a positional parameter to the call to %parts:
In [1]: alias parts echo first %s second %s
In [2]: %parts A B
first A second B
In [3]: %parts A
Incorrect number of arguments: 2 expected.
parts is an alias to: ’echo first %s second %s’
If called with no parameters, %alias prints the table of currently defined aliases.
The %rehash/rehashx magics allow you to load your entire $PATH as ipython aliases. See their
respective docstrings (or sec. 6.2 for further details).
The dreload function does a recursive reload of a module: changes made to the module since
you imported will actually be available without having to exit.
IPython provides the option to see very detailed exception tracebacks, which can be especially
useful when debugging large programs. You can run any Python file with the %run function to
benefit from these detailed tracebacks. Furthermore, both normal and verbose tracebacks can be
colored (if your terminal supports it) which makes them much easier to parse visually.
See the magic xmode and colors functions for details (just type %magic).
These features are basically a terminal version of Ka-Ping Yee’s cgitb module, now part of the
standard Python library.
IPython offers numbered prompts (In/Out) with input and output caching. All input is saved and
can be retrieved as variables (besides the usual arrow key recall).
The following GLOBAL variables always exist (so don’t overwrite them!): _i: stores previous
input. _ii: next previous. _iii: next-next previous. _ih : a list of all input _ih[n] is the input
50
6 INTERACTIVE USE 6.12 Output caching system
from line n and this list is aliased to the global variable In. If you overwrite In with a variable of
your own, you can remake the assignment to the internal list with a simple ’In=_ih’.
Additionally, global variables named _i<n> are dynamically created (<n> being the prompt
counter), such that
_i<n> == _ih[<n>] == In[<n>].
For example, what you typed at prompt 14 is available as _i14, _ih[14] and In[14].
This allows you to easily cut and paste multi line interactive prompts by printing them out: they
print like a clean string, without prompt characters. You can also manipulate them like regular
variables (they are strings), modify or exec them (typing ’exec _i9’ will re-execute the contents
of input prompt 9, ’exec In[9:14]+In[18]’ will re-execute lines 9 through 13 and line 18).
You can also re-execute multiple lines of input easily by using the magic %macro function (which
automates the process and allows re-execution without having to type ’exec’ every time). The
macro system also allows you to re-execute previous lines which include magic function calls
(which require special processing). Type %macro? or see sec. 6.2 for more details on the macro
system.
A history function %hist allows you to see any part of your input history by printing a range of
the _i variables.
For output that is returned from actions, a system similar to the input cache exists but using _
instead of _i. Only actions that produce a result (NOT assignments, for example) are cached.
If you are familiar with Mathematica, IPython’s _ variables behave exactly like Mathematica’s %
variables.
The following GLOBAL variables always exist (so don’t overwrite them!):
Additionally, global variables named _<n> are dynamically created (<n> being the prompt
counter), such that the result of output <n> is always available as _<n> (don’t use the angle brack-
ets, just the number, e.g. _21).
These global variables are all stored in a global dictionary (not a list, since it only has entries for
lines which returned a result) available under the names _oh and Out (similar to _ih and In).
So the output from line 12 can be obtained as _12, Out[12] or _oh[12]. If you accidentally
overwrite the Out variable you can recover it by typing ’Out=_oh’ at the prompt.
This system obviously can potentially put heavy memory demands on your system, since it pre-
vents Python’s garbage collector from removing any previously computed results. You can control
how many results are kept in memory with the option (at the command line or in your ipythonrc
file) cache_size. If you set it to 0, the whole system is completely disabled and the prompts re-
vert to the classic ’> > >’ of normal Python.
51
6.13 Directory history 6 INTERACTIVE USE
Your history of visited directories is kept in the global list _dh, and the magic %cd command can
be used to go to any entry in that list. The %dhist command allows you to view this history.
These features were adapted from Nathan Gray’s LazyPython. They are meant to allow less typing
for common situations.
Callable objects (i.e. functions, methods, etc) can be invoked like this (notice the commas between
the arguments):
> > > callable_ob arg1, arg2, arg3
and the input will be translated to this:
--> callable_ob(arg1, arg2, arg3)
You can force automatic parentheses by using ’/’ as the first character of a line. For example:
> > > /globals # becomes ’globals()’
Note that the ’/’ MUST be the first character on the line! This won’t work:
> > > print /globals # syntax error
In most cases the automatic algorithm should work, so you should rarely need to explicitly invoke
/. One notable exception is if you are trying to call a function with a list of tuples as arguments
(the parenthesis will confuse IPython):
In [1]: zip (1,2,3),(4,5,6) # won’t work
but this will work:
In [2]: /zip (1,2,3),(4,5,6)
------> zip ((1,2,3),(4,5,6))
Out[2]= [(1, 4), (2, 5), (3, 6)]
IPython tells you that it has altered your command line by displaying the new command line
preceded by -->. e.g.:
In [18]: callable list
-------> callable (list)
You can force automatic quoting of a function’s arguments by using ‘,’ or ‘;’ as the first char-
acter of a line. For example:
> > > ,my_function /home/me # becomes my_function("/home/me")
52
7 CUSTOMIZATION
If you use ‘;’ instead, the whole argument is quoted as a single string (while ‘,’ splits on
whitespace):
> > > ,my_function a b c # becomes my_function("a","b","c")
> > > ;my_function a b c # becomes my_function("a b c")
Note that the ‘,’ or ‘;’ MUST be the first character on the line! This won’t work:
> > > x = ,my_function /home/me # syntax error
7 Customization
As we’ve already mentioned, IPython reads a configuration file which can be specified at the
command line (-rcfile) or which by default is assumed to be called ipythonrc. Such a file is
looked for in the current directory where IPython is started and then in your IPYTHONDIR, which
allows you to have local configuration files for specific projects. In this section we will call these
types of configuration files simply rcfiles (short for resource configuration file).
The syntax of an rcfile is one of key-value pairs separated by whitespace, one per line. Lines
beginning with a # are ignored as comments, but comments can not be put on lines with data (the
parser is fairly primitive). Note that these are not python files, and this is deliberate, because it
allows us to do some things which would be quite tricky to implement if they were normal python
files.
First, an rcfile can contain permanent default values for almost all command line options (except
things like -help or -Version). Sec 5.2 contains a description of all command-line options.
However, values you explicitly specify at the command line override the values defined in the
rcfile.
Besides command line option values, the rcfile can specify values for certain extra special options
which are not available at the command line. These options are briefly described below.
Each of these options may appear as many times as you need it in the file.
include <file1> <file2> ...: you can name other rcfiles you want to recursively load up
to 15 levels (don’t use the <> brackets in your names!). This feature allows you to de-
fine a ’base’ rcfile with general options and special-purpose files which can be loaded
only when needed with particular configuration options. To make this more conve-
nient, IPython accepts the -profile <name> option (abbreviates to -p <name>)
which tells it to look for an rcfile named ipythonrc-<name>.
import_some <mod> <f1> <f2> ...: import functions with ’from <mod> import
<f1>,<f2>,...’
import_all <mod1> <mod2> ...: for each module listed import functions with ’from
<mod> import *’
53
7.1 Sample ipythonrc file 7 CUSTOMIZATION
execfile <filename>: execute the python file given with an ’execfile(filename)’ com-
mand. Username expansion is performed on the given names. So if you need any
amount of extra fancy customization that won’t fit in any of the above ’canned’ op-
tions, you can just put it in a separate python file and execute it.
alias <alias_def>: this is equivalent to calling ’%alias <alias_def>’ at the IPython com-
mand line. This way, from within IPython you can do common system tasks without
having to exit it or use the ! escape. IPython isn’t meant to be a shell replacement, but
it is often very useful to be able to do things with files while testing code. This gives
you the flexibility to have within IPython any aliases you may be used to under your
normal system shell.
The default rcfile, called ipythonrc and supplied in your IPYTHONDIR directory contains lots
of comments on all of these options. We reproduce it here for reference:
# -*- Mode: Shell-Script -*- Not really, but shows comments correctly
# $Id: ipythonrc 2156 2007-03-19 02:32:19Z fperez $
#***************************************************************************
#
# Configuration file for IPython -- ipythonrc format
#
# ===========================================================
# Deprecation note: you should look into modifying ipy_user_conf.py (located
# in ~/.ipython or ~/_ipython, depending on your platform) instead, it’s a
# more flexible and robust (and better supported!) configuration
# method.
# ===========================================================
#
# The format of this file is simply one of ’key value’ lines.
# Lines containing only whitespace at the beginning and then a # are ignored
# as comments. But comments can NOT be put on lines with data.
#---------------------------------------------------------------------------
# Section: included files
# Put one or more *config* files (with the syntax of this file) you want to
# include. For keys with a unique value the outermost file has precedence. For
# keys with multiple values, they all get assembled into a list which then
# gets loaded by IPython.
54
7 CUSTOMIZATION 7.1 Sample ipythonrc file
#---------------------------------------------------------------------------
# Section: startup setup
# These are mostly things which parallel a command line option of the same
# name.
# Keys in this section should only appear once. If any key from this section
# is encountered more than once, the last value remains, all earlier ones get
# discarded.
# autocall 0 -> disabled (you can toggle it at runtime with the %autocall
...magic)
# autocall 1 -> active, but do not apply if there are no arguments on the line
....
# 2 -> Active always. Even if no arguments are present, the callable object
# is called:
# Note that even with autocall off, you can still use ’/’ at the start of a
# line to treat the first argument on the command line as a function and add
# parentheses to it:
55
7.1 Sample ipythonrc file 7 CUSTOMIZATION
#Out[8]: ’43’
autocall 1
# Auto-edit syntax errors. When you use the %edit magic in ipython to edit
# source code (see the ’editor’ variable below), it is possible that you save
# a file with syntax errors in it. If this variable is true, IPython will ask
# you whether to re-open the editor immediately to correct such an error.
autoedit_syntax 0
# Auto-indent. IPython can recognize lines ending in ’:’ and indent the next
# line, while also un-indenting automatically after ’raise’ or ’return’.
# This feature uses the readline library, so it will honor your ~/.inputrc
# configuration (or whatever file your INPUTRC variable points to). Adding
# the following lines to your .inputrc file can make indent/unindenting more
# convenient (M-i indents, M-u unindents):
# $if Python
# "\M-i": " "
# "\M-u": "\d\d\d\d"
# $endif
autoindent 1
# Auto-magic. This gives you access to all the magic functions without having
# to prepend them with an % sign. If you define a variable with the same name
# as a magic function (say who=1), you will need to access the magic function
# with % (%who in this example). However, if later you delete your variable
# (del who), you’ll recover the automagic calling form.
automagic 1
# Size of the output cache. After this many entries are stored, the cache will
# get flushed. Depending on the size of your intermediate calculations, you
# may have memory problems if you make it too big, since keeping things in the
# cache prevents Python from reclaiming the memory for old results. Experiment
# with a value that works well for you.
56
7 CUSTOMIZATION 7.1 Sample ipythonrc file
cache_size 1000
# This option allows coloring the prompts and traceback printouts. This
# requires a terminal which can properly handle color escape sequences. If you
# are having problems with this, use the NoColor scheme (uses no color escapes
# at all).
# The Linux option works well in linux console type environments: dark
# background with light fonts.
########################
# Note to Windows users
#
# Color and readline support is avaialble to Windows users via Gary Bishop’s
# readline library. You can find Gary’s tools at
# http://sourceforge.net/projects/uncpythontools.
# Note that his readline module requires in turn the ctypes library, available
# at http://starship.python.net/crew/theller/ctypes.
########################
color_info 1
# confirm_exit: set to 1 if you want IPython to confirm when you try to exit
# with an EOF (Control-d in Unix, Control-Z/Enter in Windows). Note that using
# the magic functions %Exit or %Quit you can force a direct exit, bypassing
# any confirmation.
57
7.1 Sample ipythonrc file 7 CUSTOMIZATION
confirm_exit 1
deep_reload 0
# Which editor to use with the %edit command. If you leave this at 0, IPython
# will honor your EDITOR environment variable. Since this editor is invoked on
# the fly by ipython and is meant for editing small code snippets, you may
# want to use a small, lightweight editor here.
# For Emacs users, setting up your Emacs server properly as described in the
# manual is a good idea. An alternative is to use jed, a very light editor
# with much of the feel of Emacs (though not as powerful for heavy-duty work).
editor 0
# Automatically call the pdb debugger after every uncaught exception. If you
# are used to debugging using pdb, this puts you automatically inside of it
# after any call (either in IPython or in code called by it) which triggers an
# exception which goes uncaught.
pdb 0
# Enable the pprint module for printing. pprint tends to give a more readable
# display (than print) for complex nested data structures.
pprint 1
# Prompt strings
# Use \# to represent the current prompt number, and quote them to protect
# spaces.
prompt_in1 ’In [\#]: ’
58
7 CUSTOMIZATION 7.1 Sample ipythonrc file
prompt_out ’Out[\#]: ’
# Select whether to left-pad the output prompts to match the length of the
# input ones. This allows you for example to use a simple ’>’ as an output
# prompt, and yet have the output line up with the input. If set to false,
# the output prompts will be unpadded (flush left).
prompts_pad_left 1
# Pylab support: when ipython is started with the -pylab switch, by default it
# executes ’from matplotlib.pylab import *’. Set this variable to false if
...you
# want to disable this behavior.
# Use the readline library (1) or not (0). Most users will want this on, but
# if you experience strange problems with line management (mainly when using
# IPython inside Emacs buffers) you may try disabling it. Not having it on
# prevents you from getting command history with the arrow keys, searching and
# name completion using TAB.
readline 1
# The default value for this is 0, which means IPython will auto-detect your
# screen size every time it needs to print. If for some reason this isn’t
# working well (it needs curses support), specify it yourself. Otherwise don’t
# change the default.
screen_length 0
59
7.1 Sample ipythonrc file 7 CUSTOMIZATION
separate_in \n
separate_out 0
separate_out2 0
wildcards_case_sensitive 1
object_info_string_level 0
# Context: prints 5 lines of context source code around each line in the
# traceback.
#xmode Plain
xmode Context
#xmode Verbose
60
7 CUSTOMIZATION 7.1 Sample ipythonrc file
multi_line_specials 1
# System calls: When IPython makes system calls (e.g. via special syntax like
# !cmd or !!cmd, or magics like %sc or %sx), it can print the command it is
# executing to standard output, prefixed by a header string.
system_verbose 1
# Set this to the value of wxPython you want to use, but note that this
# feature requires you to have the wxversion Python module to work. If you
# don’t have the wxversion module (try ’import wxversion’ at the prompt to
# check) or simply want to leave the system to pick up the default, leave this
# variable at 0.
wxversion 0
#---------------------------------------------------------------------------
# Section: Readline configuration (readline is not available for MS-Windows)
# The TAB key can be used to complete names at the command line in one of two
# ways: ’complete’ and ’menu-complete’. The difference is that ’complete’ only
# completes as much as possible while ’menu-complete’ cycles through all
# possible completions. Leave the one you prefer uncommented.
# This binds Control-l to printing the list of all possible completions when
# there is more than one (what ’complete’ does when hitting TAB twice, or at
# the first TAB if show-all-if-ambiguous is on)
readline_parse_and_bind "\C-l": possible-completions
# This forces readline to automatically print the above list when tab
# completion is set to ’complete’. You can still get this list manually by
# using the key bound to ’possible-completions’ (Control-l by default) or by
# hitting TAB twice. Turning this on makes the printing happen at the first
# TAB.
readline_parse_and_bind set show-all-if-ambiguous on
61
7.1 Sample ipythonrc file 7 CUSTOMIZATION
# If you have TAB set to complete names, you can rebind any key (Control-o by
# default) to insert a true TAB character.
readline_parse_and_bind "\C-o": tab-insert
# Bindings for incremental searches in the history. These searches use the
# string typed so far on the command line and search anything in the previous
# input history containing them.
readline_parse_and_bind "\C-r": reverse-search-history
readline_parse_and_bind "\C-s": forward-search-history
# I also like to have the same functionality on the plain arrow keys. If you’d
# rather have the arrows use all the history (and not just match what you’ve
# typed so far), comment out or delete the next two lines.
readline_parse_and_bind "\e[A": history-search-backward
readline_parse_and_bind "\e[B": history-search-forward
readline_remove_delims -/~
readline_merge_completions 1
62
7 CUSTOMIZATION 7.1 Sample ipythonrc file
# __class__).
# readline_omit__names 2 -> completion will omit all names beginning with one
# _ (which obviously means filtering out the double __ ones).
# Even when this option is set, you can still see those names by explicitly
# typing a _ after the period and hitting <tab>: ’name._<tab>’ will always
# complete attribute names starting with ’_’.
# This option is off by default so that new users see all attributes of any
# objects they are dealing with.
readline_omit__names 0
#---------------------------------------------------------------------------
# Section: modules to be loaded with ’import ...’
# List, separated by spaces, the names of the modules you want to import
# Example:
# import_mod sys os
# will produce internally the statements
# import sys
# import os
import_mod
#---------------------------------------------------------------------------
# Section: modules to import some functions from: ’from ... import ...’
# List, one per line, the modules for which you want only to import some
# functions. Give the module name first and then the name of functions to be
# imported from that module.
# Example:
# timing() and timings() are two IPython utilities for timing the execution of
# your own functions, which you may find useful. Just commment out the above
# line if you want to test them.
# If you have more than one modules_some line, each gets its own try/except
# block (like modules, see above).
63
7.1 Sample ipythonrc file 7 CUSTOMIZATION
import_some
#---------------------------------------------------------------------------
# Section: modules to import all from : ’from ... import *’
# List (same syntax as import_mod above) those modules for which you want to
# import all functions. Remember, this is a potentially dangerous thing to do,
# since it is very easy to overwrite names of things you need. Use with
# caution.
# Example:
# import_all sys os
# will produce internally the statements
# from sys import *
# from os import *
import_all
#---------------------------------------------------------------------------
# Section: Python code to execute.
# Example:
# execute x = 1
# execute print ’hello world’; y = z = ’a’
# will produce internally
# x = 1
# print ’hello world’; y = z = ’a’
# and each *line* (not each statement, we don’t do python syntax parsing) is
# executed in its own try/except block.
execute
# Note for the adventurous: you can use this to define your own names for the
# magic functions, by playing some namespace tricks:
#---------------------------------------------------------------------------
# Section: Pyhton files to load and execute.
# Put here the full names of files you want executed with execfile(file). If
# you want complicated initialization, just write whatever you want in a
# regular python file and load it from here.
64
7 CUSTOMIZATION 7.1 Sample ipythonrc file
# Filenames defined here (which *must* include the extension) are searched for
# through all of sys.path. Since IPython adds your .ipython directory to
# sys.path, they can also be placed in your .ipython dir and will be
# found. Otherwise (if you want to execute things not in .ipyton nor in
# sys.path) give a full path (you can use ~, it gets expanded)
# Example:
# execfile file1.py ~/file2.py
# will generate
# execfile(’file1.py’)
# execfile(’_path_to_your_home/file2.py’)
execfile
# If you are feeling adventurous, you can even add functionality to IPython
# through here. IPython works through a global variable called __ip which
# exists at the time when these files are read. If you know what you are doing
# (read the source) you can add functions to __ip in files loaded here.
# The file example-magic.py contains a simple but correct example. Try it:
# execfile example-magic.py
# Look at the examples in IPython/iplib.py for more details on how these magic
# functions need to process their arguments.
#---------------------------------------------------------------------------
# Section: aliases for system shell commands
# Here you can define your own names for system commands. The syntax is
# similar to that of the builtin %alias function:
# For example:
# will define ’myls’ as an alias for executing the system command ’ls -la’.
# This allows you to customize IPython’s environment to have the same aliases
# you are accustomed to from your own shell.
# You can also define aliases with parameters using %s specifiers (one per
# parameter):
65
7.2 Fine-tuning your prompt 7 CUSTOMIZATION
# first A second B
# alias
IPython’s prompts can be customized using a syntax similar to that of the bash shell. Many of
bash’s escapes are supported, as well as a few additional ones. We list them below:
\# the prompt/history count number. This escape is automatically wrapped in the coloring codes
for the currently active color scheme.
\N the ’naked’ prompt/history count number: this is just the number itself, without any coloring
applied to it. This lets you produce numbered prompts with your own colors.
\D the prompt/history count, with the actual digits replaced by dots. Used mainly in continua-
tion prompts (prompt_in2)
\Xn where n = 0 . . . 5. The current working directory, with $HOME replaced by ~, and filtered out
to contain only n path elements
\Yn Similar to \Xn, but with the n + 1 element included if it is ~ (this is similar to the behavior of
the %cn escapes in tcsh)
\H the hostname
\n a newline
\r a carriage return
In addition to these, ANSI color escapes can be insterted into the prompts, as \C_ColorName. The
list of valid color names is: Black, Blue, Brown, Cyan, DarkGray, Green, LightBlue, LightCyan,
LightGray, LightGreen, LightPurple, LightRed, NoColor, Normal, Purple, Red, White, Yellow.
Finally, IPython supports the evaluation of arbitrary expressions in your prompt string. The
prompt strings are evaluated through the syntax of PEP 215, but basically you can use $x.y to
66
7 CUSTOMIZATION 7.3 IPython profiles
expand the value of x.y, and for more complicated expressions you can use braces: ${foo()+x}
will call function foo and add to it the value of x, before putting the result into your prompt. For
example, using
prompt_in1 ’${commands.getoutput("uptime")}\nIn [\#]: ’
will print the result of the uptime command on each prompt (assuming the commands module
has been imported in your ipythonrc file).
The following options in an ipythonrc file will give you IPython’s default prompts:
prompt_in1 ’In [\#]:’
prompt_in2 ’ .\D.:’
prompt_out ’Out[\#]:’
which look like this:
In [1]: 1+2
Out[1]: 3
In [2]: for i in (1,2,3):
...: print i,
...:
1 2 3
These will give you a very colorful prompt with path information:
#prompt_in1 ’\C_Red\u\C_Blue[\C_Cyan\Y1\C_Blue]\C_LightGreen\#>’
prompt_in2 ’ ..\D>’
prompt_out ’<\#>’
which look like this:
fperez[~/ipython]1> 1+2
<1> 3
fperez[~/ipython]2> for i in (1,2,3):
...> print i,
...>
1 2 3
The following shows the usage of dynamic expression evaluation:
As we already mentioned, IPython supports the -profile command-line option (see sec.
5.2). A profile is nothing more than a particular configuration file like your basic ipythonrc
one, but with particular customizations for a specific purpose. When you start IPython with
’ipython -profile <name>’, it assumes that in your IPYTHONDIR there is a file called
ipythonrc-<name>, and loads it instead of the normal ipythonrc.
This system allows you to maintain multiple configurations which load modules, set options,
define functions, etc. suitable for different tasks and activate them in a very simple manner. In
67
9 EMBEDDING IPYTHON
order to avoid having to repeat all of your basic options (common things that don’t change such
as your color preferences, for example), any profile can include another configuration file. The
most common way to use profiles is then to have each one include your basic ipythonrc file as
a starting point, and then add further customizations.
In sections 11 and 16 we discuss some particular profiles which come as part of the standard
IPython distribution. You may also look in your IPYTHONDIR directory, any file whose name
begins with ipythonrc- is a profile. You can use those as examples for further customizations
to suit your own needs.
Python honors the environment variable PYTHONSTARTUP and will execute at startup the file
referenced by this variable. If you put at the end of this file the following two lines of code:
import IPython
IPython.Shell.IPShell().mainloop(sys_exit=1)
then IPython will be your working environment anytime you start Python. The sys_exit=1 is
needed to have IPython issue a call to sys.exit() when it finishes, otherwise you’ll be back at
the normal Python ’> > >’ prompt3 .
This is probably useful to developers who manage multiple Python versions and don’t want to
have correspondingly multiple IPython versions. Note that in this mode, there is no way to pass
IPython any command-line options, as those are trapped first by Python itself.
9 Embedding IPython
It is possible to start an IPython instance inside your own Python programs. This allows you to
evaluate dynamically the state of your code, operate with your variables, analyze them, etc. Note
however that any changes you make to values while in the shell do not propagate back to the
running code, so it is safe to modify your values because you won’t break your code in bizarre
ways by doing so.
This feature allows you to easily have a fully functional python environment for doing object
introspection anywhere in your code with a simple function call. In some cases a simple print
statement is enough, but if you need to do more detailed analysis of a code fragment this feature
can be very valuable.
It can also be useful in scientific computing situations where it is common to need to do some
automatic, computationally intensive part and then stop to look at data, plots, etc4 . Opening an
IPython instance will give you full access to your data and functions, and you can resume program
execution once you are done with the interactive part (perhaps to stop again later, as many times
as needed).
3
Based on an idea by Holger Krekel.
4
This functionality was inspired by IDL’s combination of the stop keyword and the .continue executive com-
mand, which I have found very useful in the past, and by a posting on comp.lang.python by cmkl <cmkleffner-AT-
gmx.de> on Dec. 06/01 concerning similar uses of pyrepl.
68
9 EMBEDDING IPYTHON
The following code snippet is the bare minimum you need to include in your Python programs
for this to work (detailed examples follow later):
You can run embedded instances even in code which is itself being run at the IPython interactive
prompt with ’%run <filename>’. Since it’s easy to get lost as to where you are (in your top-
level IPython or in your embedded one), it’s a good idea in such cases to set the in/out prompts
to something different for the embedded instances. The code examples below illustrate this.
You can also have multiple IPython instances in your program and open them separately, for
example with different options for data presentation. If you close and open the same instance
multiple times, its prompt counters simply continue from each execution to the next.
Please look at the docstrings in the Shell.py module for more details on the use of this system.
The following sample file illustrating how to use the embedding functionality is provided in the
examples directory as example-embed.py. It should be fairly self-explanatory:
#!/usr/bin/env python
Please see the documentation in the IPython.Shell module for more details.
# IPython sets the __IPYTHON__ variable so you can know if you have nested
# copies running.
# Try running this code both at the command line and from inside IPython (with
# %run example-embed.py)
try:
__IPYTHON__
except NameError:
nested = 0
args = [’’]
else:
print "Running nested copies of IPython."
print "The prompts for the nested copy have been modified"
nested = 1
# what the embedded instance will see as sys.argv:
args = [’-pi1’,’In <\\#>: ’,’-pi2’,’ .\\D.: ’,
’-po’,’Out<\\#>: ’,’-nosep’]
69
9 EMBEDDING IPYTHON
# You can then call ipshell() anywhere you need it (with an optional
# message):
ipshell(’***Called from top level. ’
’Hit Ctrl-D to exit interpreter and continue program.’)
#---------------------------------------------------------------------------
# More details:
# - A call-specific header string, which you can use to indicate where in the
# execution flow the shell is starting.
# Both the startup banner and the exit message default to None, and can be set
# either at the instance constructor or at any other time with the
# set_banner() and set_exit_msg() methods.
# The shell instance can be also put in ’dummy’ mode globally or on a per-call
# basis. This gives you fine control for debugging without having to change
# code all over the place.
70
9 EMBEDDING IPYTHON
# This is how the global banner and exit_msg can be reset at any point
ipshell.set_banner(’Entering interpreter - New Banner’)
ipshell.set_exit_msg(’Leaving interpreter - New exit_msg’)
def foo(m):
s = ’spam’
ipshell(’***In foo(). Try @whos, or print s or m:’)
print ’foo says m = ’,m
def bar(n):
s = ’eggs’
ipshell(’***In bar(). Try @whos, or print s or n:’)
print ’bar says n = ’,n
# The shell can be put in ’dummy’ mode where calls to it silently return. This
# allows you, for example, to globally turn off debugging for a program with a
# single call.
ipshell.set_dummy_mode(1)
print ’\nTrying to call IPython which is now "dummy":’
ipshell()
print ’Nothing happened...’
# The global ’dummy’ mode can still be overridden for a single call
print ’\nOverriding dummy mode manually:’
ipshell(dummy=0)
Once you understand how the system functions, you can use the following code fragments in
your programs which are ready for cut and paste:
"""Quick code snippets for embedding IPython into other programs.
See example-embed.py for full details, this file has the bare minimum code for
cut and paste use once you understand how to use the system."""
#---------------------------------------------------------------------------
# This code loads IPython but modifies a few things if it detects it’s running
# embedded in another IPython session (helps avoid confusion)
71
10 USING THE PYTHON DEBUGGER (PDB)
try:
__IPYTHON__
except NameError:
argv = [’’]
banner = exit_msg = ’’
else:
# Command-line options for IPython (a list like sys.argv)
argv = [’-pi1’,’In <\\#>:’,’-pi2’,’ .\\D.:’,’-po’,’Out<\\#>:’]
banner = ’*** Nested interpreter ***’
exit_msg = ’*** Back in main IPython ***’
#---------------------------------------------------------------------------
# This code will load an embeddable IPython shell always with no changes for
# nested embededings.
#---------------------------------------------------------------------------
# This code loads an embeddable shell only if NOT running inside
# IPython. Inside IPython, the embeddable shell variable ipshell is just a
# dummy function.
try:
__IPYTHON__
except NameError:
from IPython.Shell import IPShellEmbed
ipshell = IPShellEmbed()
# Now ipshell() will open IPython anywhere in the code
else:
# Define a dummy ipshell() so the same code doesn’t crash inside an
# interactive IPython
def ipshell(): pass
pdb, the Python debugger, is a powerful interactive debugger which allows you to step through
code, set breakpoints, watch variables, etc. IPython makes it very easy to start any script under
the control of pdb, regardless of whether you have wrapped it into a ‘main()’ function or not.
For this, simply type ‘%run -d myscript’ at an IPython prompt. See the %run command’s
72
11 EXTENSIONS FOR SYNTAX PROCESSING10.2 Automatic invocation of pdb on exceptions
documentation (via ‘%run?’ or in Sec. 6.2) for more details, including how to control where pdb
will stop execution first.
For more information on the use of the pdb debugger, read the included pdb.doc file
(part of the standard Python distribution). On a stock Linux system it is located at
/usr/lib/python2.3/pdb.doc, but the easiest way to read it is by using the help() func-
tion of the pdb module as follows (in an IPython prompt):
In [1]: import pdb
In [2]: pdb.help()
This will load the pdb.doc document in a file viewer for you automatically.
IPython, if started with the -pdb option (or if the option is set in your rc file) can call the Python
pdb debugger every time your code triggers an uncaught exception5 . This feature can also be
toggled at any time with the %pdb magic command. This can be extremely useful in order to find
the origin of subtle bugs, because pdb opens up at the point in your code which triggered the
exception, and while your program is at this point ‘dead’, all the data is still available and you can
walk up and down the stack frame and understand the origin of the problem.
Furthermore, you can use these debugging facilities both with the embedded IPython mode and
without IPython at all. For an embedded shell (see sec. 9), simply call the constructor with ‘-pdb’
in the argument string and automatically pdb will be called if an uncaught exception is triggered
by your code.
For stand-alone use of the feature in your programs which do not use IPython at all, put the
following lines toward the top of your ‘main’ routine:
import sys,IPython.ultraTB
sys.excepthook = IPython.ultraTB.FormattedTB(mode=‘Verbose’,
color_scheme=‘Linux’, call_pdb=1)
The mode keyword can be either ‘Verbose’ or ‘Plain’, giving either very detailed or normal
tracebacks respectively. The color_scheme keyword can be one of ‘NoColor’, ‘Linux’ (de-
fault) or ‘LightBG’. These are the same options which can be set in IPython with -colors and
-xmode.
This will give any of your programs detailed, colored tracebacks with automatic invocation of
pdb.
This isn’t for the faint of heart, because the potential for breaking things is quite high. But it can
be a very powerful and useful feature. In a nutshell, you can redefine the way IPython processes
the user input line to accept new, special extensions to the syntax without needing to change any
of IPython’s own code.
5
Many thanks to Christopher Hart for the request which prompted adding this feature to IPython.
73
11.1 Pasting of code starting with ‘> > > ’ or ‘...
11 ’ EXTENSIONS FOR SYNTAX PROCESSING
In the IPython/Extensions directory you will find some examples supplied, which we will
briefly describe now. These can be used ‘as is’ (and both provide very useful functionality), or you
can use them as a starting point for writing your own extensions.
In the python tutorial it is common to find code examples which have been taken from real python
sessions. The problem with those is that all the lines begin with either ‘> > > ’ or ‘... ’, which
makes it impossible to paste them all at once. One must instead do a line by line manual copying,
carefully removing the leading extraneous characters.
This extension identifies those starting characters and removes them from the input automatically,
so that one can paste multi-line examples directly into IPython, saving a lot of time. Please look
at the file InterpreterPasteInput.py in the IPython/Extensions directory for details on
how this is done.
IPython comes with a special profile enabling this feature, called tutorial. Simply start IPython
via ‘ipython -p tutorial’ and the feature will be available. In a normal IPython session
you can activate the feature by importing the corresponding module with:
In [1]: import IPython.Extensions.InterpreterPasteInput
The following is a ’screenshot’ of how things work when this extension is on, copying an example
from the standard tutorial:
*** Pasting of code with "> > >" or "..." has been enabled.
In [2]: fib2(10)
Out[2]: [1, 1, 2, 3, 5, 8]
Note that as currently written, this extension does not recognize IPython’s prompts for pasting.
Those are more complicated, since the user can change them very easily, they involve numbers
and can vary in length. One could however extract all the relevant information from the IPython
instance and build an appropriate regular expression. This is left as an exercise for the reader.
74
12 IPYTHON AS A SYSTEM SHELL 11.2 Input of physical quantities with units
The module PhysicalQInput allows a simplified form of input for physical quantities with
units. This file is meant to be used in conjunction with the PhysicalQInteractive mod-
ule (in the same directory) and Physics.PhysicalQuantities from Konrad Hinsen’s Scien-
tificPython (http://dirac.cnrs-orleans.fr/ScientificPython/).
The Physics.PhysicalQuantities module defines PhysicalQuantity objects, but these
must be declared as instances of a class. For example, to define v as a velocity of 3 m/s, normally
you would write:
In [1]: v = PhysicalQuantity(3,’m/s’)
Using the PhysicalQ_Input extension this can be input instead as:
In [1]: v = 3 m/s
which is much more convenient for interactive use (even though it is blatantly invalid Python
syntax).
The physics profile supplied with IPython (enabled via ’ipython -p physics’) uses these
extensions, which you can also activate with:
from math import * # math MUST be imported BEFORE PhysicalQInteractive
from IPython.Extensions.PhysicalQInteractive import *
import IPython.Extensions.PhysicalQInput
IPython ships with a special profile called pysh, which you can activate at the command line as
‘ipython -p pysh’. This loads InterpreterExec, along with some additional facilities and
a prompt customized for filesystem navigation.
Note that this does not make IPython a full-fledged system shell. In particular, it has no job control,
so if you type Ctrl-Z (under Unix), you’ll suspend pysh itself, not the process you just started.
What the shell profile allows you to do is to use the convenient and powerful syntax of Python to
do quick scripting at the command line. Below we describe some of its features.
12.1 Aliases
All of your $PATH has been loaded as IPython aliases, so you should be able to type any normal
system command and have it executed. See %alias? and %unalias? for details on the alias
facilities. See also %rehash? and %rehashx? for details on the mechanism used to load $PATH.
Any lines which begin with ‘~’, ‘/’ and ‘.’ will be executed as shell commands instead of as
Python code. The special escapes below are also recognized. !cmd is valid in single or multi-line
input, all others are only valid in single-line input:
75
12.2 Special syntax 12 IPYTHON AS A SYSTEM SHELL
The $/$$ syntaxes make Python variables from system output, which you can later use for further
scripting. The converse is also possible: when executing an alias or calling to the system via !/!!,
you can expand any python variable or expression by prepending it with $. Full details of the
allowed syntax can be found in Python’s PEP 215.
A few brief examples will illustrate these (note that the indentation below may be incorrectly
displayed):
fperez[~/test]|3> !ls *s.py
scopes.py strings.py
ls is an internal alias, so there’s no need to use !:
fperez[~/test]|4> ls *s.py
scopes.py* strings.py
!!ls will return the output into a Python variable:
fperez[~/test]|5> !!ls *s.py
<5> [’scopes.py’, ’strings.py’]
fperez[~/test]|6> print _5
[’scopes.py’, ’strings.py’]
$ and $$ allow direct capture to named variables:
fperez[~/test]|7> $astr = ls *s.py
fperez[~/test]|8> astr
<8> ’scopes.py\nstrings.py’
fperez[~/test]|9> $$alist = ls *s.py
fperez[~/test]|10> alist
<10> [’scopes.py’, ’strings.py’]
alist is now a normal python list you can loop over. Using $ will expand back the python values
when alias calls are made:
fperez[~/test]|11> for f in alist:
|..> print ’file’,f,
|..> wc -l $f
|..>
file scopes.py 13 scopes.py
file strings.py 4 strings.py
Note that you may need to protect your variables with braces if you want to append strings to
their names. To copy all files in alist to .bak extensions, you must use:
fperez[~/test]|12> for f in alist:
|..> cp $f ${f}.bak
76
12 IPYTHON AS A SYSTEM SHELL 12.3 Useful functions and modules
If you try using $f.bak, you’ll get an AttributeError exception saying that your string object
doesn’t have a .bak attribute. This is because the $ expansion mechanism allows you to expand
full Python expressions:
fperez[~/test]|13> echo "sys.platform is: $sys.platform"
sys.platform is: linux2
IPython’s input history handling is still active, which allows you to rerun a single block of multi-
line input by simply using exec:
fperez[~/test]|14> $$alist = ls *.eps
fperez[~/test]|15> exec _i11
file image2.eps 921 image2.eps
file image.eps 921 image.eps
While these are new special-case syntaxes, they are designed to allow very efficient use of the
shell with minimal typing. At an interactive shell prompt, conciseness of expression wins over
readability.
The os, sys and shutil modules from the Python standard library are automatically loaded. Some
additional functions, useful for shell usage, are listed below. You can request more help about
them with ‘?’.
system - like shell(), but return the exit status of the command
sout/lout are the functional equivalents of $/$$. They are provided to allow you to capture
system output in the middle of true python code, function definitions, etc (where $ and $$ are
invalid).
Since each command passed by pysh to the underlying system is executed in a subshell which
exits immediately, you can NOT use !cd to navigate the filesystem.
Pysh provides its own builtin ‘%cd’ magic command to move in the filesystem (the % is not re-
quired with automagic on). It also maintains a list of visited directories (use %dhist to see it) and
allows direct switching to any of them. Type ‘cd?’ for more details.
%pushd, %popd and %dirs are provided for directory stack handling.
77
12.5 Prompt customization 12 IPYTHON AS A SYSTEM SHELL
The supplied ipythonrc-pysh profile comes with an example of a very colored and detailed
prompt, mainly to serve as an illustration. The valid escape sequences, besides color names, are:
\# - Prompt number, wrapped in the color escapes for the input prompt (determined by the cur-
rent color scheme).
\N - Just the prompt counter number, without any coloring wrappers. You can thus customize the
actual prompt colors manually.
\YN - Where N=0..5. Like XN, but if ~ is term N+1 it’s also shown.
\u - Username.
\H - Full hostname.
\n - Newline.
\r - Carriage return.
You can configure your prompt colors using any ANSI color escape. Each color escape sets the
color for any subsequent text, until another escape comes in and changes things. The valid color
escapes are:
\C_Black
\C_Blue
\C_Brown
\C_Cyan
\C_DarkGray
\C_Green
78
13 THREADING SUPPORT
\C_LightBlue
\C_LightCyan
\C_LightGray
\C_LightGreen
\C_LightPurple
\C_LightRed
\C_Purple
\C_Red
\C_White
\C_Yellow
13 Threading support
WARNING: The threading support is still somewhat experimental, and it has only seen reason-
able testing under Linux. Threaded code is particularly tricky to debug, and it tends to show
extremely platform-dependent behavior. Since I only have access to Linux machines, I will have
to rely on user’s experiences and assistance for this area of IPython to improve under other plat-
forms.
IPython, via the -gthread , -qthread and -wthread options (described in Sec. 5.1), can run in
multithreaded mode to support pyGTK, Qt and WXPython applications respectively. These GUI
toolkits need to control the python main loop of execution, so under a normal Python interpreter,
starting a pyGTK, Qt or WXPython application will immediately freeze the shell.
IPython, with one of these options (you can only use one at a time), separates the graphical loop
and IPython’s code execution run into different threads. This allows you to test interactively (with
%run, for example) your GUI code without blocking.
A nice mini-tutorial on using IPython along with the Qt Designer application is available
at the SciPy wiki: http://www.scipy.org/Cookbook/Matplotlib/Qt_with_IPython_
and_Designer.
13.1 Tk issues
As indicated in Sec. 5.1, a special -tk option is provided to try and allow Tk graphical applications
to coexist interactively with WX, Qt or GTK ones. Whether this works at all, however, is very plat-
form and configuration dependent. Please experiment with simple test cases before committing
to using this combination of Tk and GTK/Qt/WX threading in a production environment.
79
13.2 Signals and Threads 14 INTERACTIVE DEMOS WITH IPYTHON
When any of the thread systems (GTK, Qt or WX) are active, either directly or via -pylab with
a threaded backend, it is impossible to interrupt long-running Python code via Ctrl-C. IPython
can not pass the KeyboardInterrupt exception (or the underlying SIGINT) across threads, so any
long-running process started from IPython will run to completion, or will have to be killed via an
external (OS-based) mechanism.
To the best of my knowledge, this limitation is imposed by the Python interpreter itself, and it
comes from the difficulty of writing portable signal/threaded code. If any user is an expert on this
topic and can suggest a better solution, I would love to hear about it. In the IPython sources, look
at the Shell.py module, and in particular at the runcode() method.
Be mindful that the Python interpreter switches between threads every N bytecodes, where
the default value as of Python 2.3 is N = 100. This value can be read by using the
sys.getcheckinterval() function, and it can be reset via sys.setcheckinterval(N ).
This switching of threads can cause subtly confusing effects if one of your threads is doing file
I/O. In text mode, most systems only flush file buffers when they encounter a ‘\n’. An instruc-
tion as simple as
print > > filehandle, “hello world”
actually consists of several bytecodes, so it is possible that the newline does not reach your file
before the next thread switch. Similarly, if you are writing to a file in binary mode, the file won’t
be flushed until the buffer fills, and your other thread may see apparently truncated files.
For this reason, if you are using IPython’s thread support and have (for example) a GUI applica-
tion which will read data generated by files written to from the IPython thread, the safest approach
is to open all of your files in unbuffered mode (the third argument to the file/open function is
the buffering value):
filehandle = open(filename,mode,0)
This is obviously a brute force way of avoiding race conditions with the file buffering. If you want
to do it cleanly, and you have a resource which is being shared by the interactive IPython loop and
your GUI thread, you should really handle it with thread locking and syncrhonization properties.
The Python documentation discusses these.
IPython ships with a basic system for running scripts interactively in sections, useful when pre-
senting code to audiences. A few tags embedded in comments (so that the script remains valid
Python code) divide a file into separate blocks, and the demo can be run one block at a time, with
IPython printing (with syntax highlighting) the block before executing it, and returning to the in-
teractive prompt after each block. The interactive namespace is updated after each block is run
with the contents of the demo’s namespace.
This allows you to show a piece of code, run it and then execute interactively commands based
on the variables just created. Once you want to continue, you simply execute the next block of the
80
14 INTERACTIVE DEMOS WITH IPYTHON
demo. The following listing shows the markup necessary for dividing a script into sections for
execution as a demo.
"""A simple interactive demo to illustrate the use of IPython’s Demo class.
Any python script can be run as a demo, but that does little more than showing
it on-screen, syntax-highlighted in one shot. If you add a little simple
markup, you can stop at specified intervals and return to the ipython prompt,
resuming execution later.
"""
# The mark below defines a block boundary, which is a point where IPython will
# stop execution and return to the interactive prompt.
# Note that in actual interactive execution,
# <demo> --- stop ---
x = 1
y = 2
print ’This is a silent block, which gets executed but not printed.’
print ’z=’,x
print ’bye!’
In order to run a file as a demo, you must first make a Demo object out of it. If the file is named
myscript.py, the following code will make a demo:
This creates the mydemo object, whose blocks you run one at a time by simply calling the object
with no arguments. If you have autocall active in IPython (the default), all you need to do is type
81
16 PLOTTING WITH GNUPLOT
mydemo
and IPython will call it, executing each block. Demo objects can be restarted, you can move for-
ward or back skipping blocks, re-execute the last block, etc. Simply use the Tab key on a demo
object to see its methods, and call ‘?’ on them to see their docstrings for more usage details. In
addition, the demo module itself contains a comprehensive docstring, which you can access via
Limitations: It is important to note that these demos are limited to fairly simple uses. In particular,
you can not put division marks in indented code (loops, if statements, function definitions, etc.)
Supporting something like this would basically require tracking the internal execution state of
the Python interpreter, so only top-level divisions are allowed. If you want to be able to open an
IPython instance at an arbitrary point in a program, you can use IPython’s embedding facilities,
described in detail in Sec. 9.
Through the magic extension system described in sec. 6.2, IPython incorporates a mechanism for
conveniently interfacing with the Gnuplot system (http://www.gnuplot.info). Gnuplot is a
very complete 2D and 3D plotting package available for many operating systems and commonly
included in modern Linux distributions.
Besides having Gnuplot installed, this functionality requires the Gnuplot.py module for interfac-
ing python with Gnuplot. It can be downloaded from: http://gnuplot-py.sourceforge.
net.
82
16 PLOTTING WITH GNUPLOT 16.1 Proper Gnuplot configuration
As of version 4.0, Gnuplot has excellent mouse and interactive keyboard support. However, as of
Gnuplot.py version 1.7, a new option was added to communicate between Python and Gnuplot
via FIFOs (pipes). This mechanism, while fast, also breaks the mouse system. You must therefore
set the variable prefer_fifo_data to 0 in file gp_unix.py if you wish to keep the interactive
mouse and keyboard features working properly (prefer_inline_data also must be 0, but this
is the default so unless you’ve changed it manually you should be fine).
’Out of the box’, Gnuplot is configured with a rather poor set of size, color and linewidth choices
which make the graphs fairly hard to read on modern high-resolution displays (although they
work fine on old 640x480 ones). Below is a section of my .Xdefaults file which I use for having
a more convenient Gnuplot setup. Remember to load it by running ‘xrdb .Xdefaults‘:
!******************************************************************
! gnuplot options
! modify this for a convenient window size
gnuplot*geometry: 780x580
! color options
gnuplot*background: black
gnuplot*textColor: white
gnuplot*borderColor: white
gnuplot*axisColor: white
gnuplot*line1Color: red
gnuplot*line2Color: green
gnuplot*line3Color: blue
gnuplot*line4Color: magenta
gnuplot*line5Color: cyan
gnuplot*line6Color: sienna
gnuplot*line7Color: orange
gnuplot*line8Color: coral
83
16.2 The IPython.GnuplotRuntime module 16 PLOTTING WITH GNUPLOT
IPython includes a module called Gnuplot2.py which extends and improves the default
Gnuplot.py (which it still relies upon). For example, the new plot function adds several im-
provements to the original making it more convenient for interactive use, and hardcopy fixes a
bug in the original which under some circumstances blocks the creation of PostScript output.
For scripting use, GnuplotRuntime.py is provided, which wraps Gnuplot2.py and creates a
series of global aliases. These make it easy to control Gnuplot plotting jobs through the Python
language.
Below is some example code which illustrates how to configure Gnuplot inside your own pro-
grams but have it available for further interactive use through an embedded IPython instance.
Simply run this file at a system prompt. This file is provided as example-gnuplot.py in the
examples directory:
#!/usr/bin/env python
"""
Example code showing how to use Gnuplot and an embedded IPython shell.
"""
84
18 BRIEF HISTORY 16.3 The numeric profile: a scientific computing environment
The numeric IPython profile, which you can activate with ‘ipython -p numeric’ will auto-
matically load the IPython Gnuplot extensions (plus Numeric and other useful things for numer-
ical computing), contained in the IPython.GnuplotInteractive module. This will create the
globals Gnuplot (an alias to the improved Gnuplot2 module), gp (a Gnuplot active instance),
the new magic commands %gpc and %gp_set_instance and several other convenient globals.
Type gphelp() for further details.
This should turn IPython into a convenient environment for numerical computing, with all the
functions in the NumPy library and the Gnuplot facilities for plotting. Further improvements can
be obtained by loading the SciPy libraries for scientific computing, available at http://scipy.
org.
If you are in the middle of a working session with numerical objects and need to plot them but
you didn’t start the numeric profile, you can load these extensions at any time by typing
from IPython.GnuplotInteractive import *
at the IPython prompt. This will allow you to keep your objects intact and start using Gnuplot to
view them.
17 Reporting bugs
Ideally, IPython itself shouldn’t crash. It will catch exceptions produced by you, but bugs in its
internals will still crash it.
In such a situation, IPython will leave a file named IPython_crash_report.txt in your
IPYTHONDIR directory (that way if crashes happen several times it won’t litter many directo-
ries, the post-mortem file is always located in the same place and new occurrences just overwrite
the previous one). If you can mail this file to the developers (see sec. 20 for names and addresses),
it will help us a lot in understanding the cause of the problem and fixing it sooner.
18 Brief history
18.1 Origins
The current IPython system grew out of the following three projects:
85
18.2 Current status 19 LICENSE
ipython by Fernando Pérez. I was working on adding Mathematica-type prompts and a flex-
ible configuration system (something better than $PYTHONSTARTUP) to the standard
Python interactive interpreter.
IPP by Janko Hauser. Very well organized, great usability. Had an old help system. IPP
was used as the ‘container’ code into which I added the functionality from ipython
and LazyPython.
LazyPython by Nathan Gray. Simple but very powerful. The quick syntax (auto parens, auto
quotes) and verbose/colored tracebacks were all taken from here.
When I found out (see sec. 20) about IPP and LazyPython I tried to join all three into a unified
system. I thought this could provide a very nice working environment, both for regular pro-
gramming and scientific computing: shell-like features, IDL/Matlab numerics, Mathematica-type
prompt history and great object introspection and help facilities. I think it worked reasonably
well, though it was a lot more work than I had initially planned.
The above listed features work, and quite well for the most part. But until a major internal restruc-
turing is done (see below), only bug fixing will be done, no other features will be added (unless
very minor and well localized in the cleaner parts of the code).
IPython consists of some 18000 lines of pure python code, of which roughly two thirds is reason-
ably clean. The rest is, messy code which needs a massive restructuring before any further major
work is done. Even the messy code is fairly well documented though, and most of the problems
in the (non-existent) class design are well pointed to by a PyChecker run. So the rewriting work
isn’t that bad, it will just be time-consuming.
18.3 Future
See the separate new_design document for details. Ultimately, I would like to see IPython be-
come part of the standard Python distribution as a ‘big brother with batteries’ to the standard
Python interactive interpreter. But that will never happen with the current state of the code, so all
contributions are welcome.
19 License
IPython is released under the terms of the BSD license, whose general form can be found at:
http://www.opensource.org/licenses/bsd-license.php. The full text of the IPython
license is reproduced below:
86
20 CREDITS
Individual authors are the holders of the copyright for their code and are listed in each file.
Some files (DPyGetOpt.py, for example) may be licensed under different conditions. Ultimately
each file indicates clearly the conditions under which its author/authors have decided to publish
the code.
Versions of IPython up to and including 0.6.3 were released under the GNU Lesser General Public
License (LGPL), available at http://www.gnu.org/copyleft/lesser.html.
20 Credits
87
20 CREDITS
Ville Vainio <vivainio-AT-gmail.com>: Ville is the new maintainer for the main trunk of
IPython after version 0.7.1.
User or development help should be requested via the IPython mailing lists:
Jack Moffit <jack-AT-xiph.org> Bug fixes, including the infamous color problem. This bug
alone caused many lost hours and frustration, many thanks to him for the fix. I’ve
always been a fan of Ogg & friends, now I have one more reason to like these folks.
Jack is also contributing with Debian packaging and many other things.
Alexander Schmolck <a.schmolck-AT-gmx.net> Emacs work, bug reports, bug fixes, ideas,
lots more. The ipython.el mode for (X)Emacs is Alex’s code, providing full support for
IPython under (X)Emacs.
88
20 CREDITS
Gary Bishop <gb-AT-cs.unc.edu> Bug reports, and patches to work around the exception
handling idiosyncracies of WxPython. Readline and color support for Windows.
Cory Dodt <cdodt-AT-fcoe.k12.ca.us> Bug reports and Windows ideas. Patches for Win-
dows installer.
89
20 CREDITS
Mike Salib <msalib-AT-mit.edu> Help fixing a subtle bug related to traceback printing.
90