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Biochem - Ecm

The document discusses the extracellular matrix (ECM), which is the material found between cells in tissues that provides structural and biochemical support. It describes the main components of the ECM as polysaccharides, glycoproteins, and proteoglycans. Collagen and elastin are two important structural proteins in the ECM. Collagen provides tensile strength and is the most abundant protein, while elastin provides elasticity and allows tissues to stretch and recoil. The biosynthesis and structure of collagen and elastin are also summarized.
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0% found this document useful (0 votes)
99 views

Biochem - Ecm

The document discusses the extracellular matrix (ECM), which is the material found between cells in tissues that provides structural and biochemical support. It describes the main components of the ECM as polysaccharides, glycoproteins, and proteoglycans. Collagen and elastin are two important structural proteins in the ECM. Collagen provides tensile strength and is the most abundant protein, while elastin provides elasticity and allows tissues to stretch and recoil. The biosynthesis and structure of collagen and elastin are also summarized.
Copyright
© © All Rights Reserved
We take content rights seriously. If you suspect this is your content, claim it here.
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GOOD MORNING

EXTRACELLULAR
MATRIX

Janet Myla Quizon Bonleon, MD, FPPS, FPAPP


Extracellular Matrix
• “the substance between cells”
• “material in the intercellular space”
• All cells in solid tissue are surrounded by
ECM
• Can surround cells as fibrils that contact the
cells on all sides
• A sheet called the basement membrane that
cells can ‘sit on’
Extracellular Matrix
• 2 groups of biochemicals that make up
the basic ECM
– Polysaccharides
• Complex chains of sugar molecules
– Glycoproteins
• Polysaccharides joined to proteins
• Proteoglycans
Extracellular Matrix
• Embedded can be various types and
amounts of structural and insoluble collagen
fibers and flexible elastic fibers that give
resilience to the tissues
• Modified forms
– Bone
– Exoskeleton (insect)
– Shells (animals)
– Cell wall (plants)
Where does it come from?
• All cells make ECM
• Specialist cells produce specific types
– Fibroblast cells secrete connective tissue ECM
– Osteoblast cells secrete bone-forming ECM
– Chrondroblast cells secrete cartilage-forming
ECM
– Fibroblasts & epithelial cells make basement
membrane
3 MAJOR CLASSES OF BIOMOLECULES
• STRUCTURAL PROTEINS
– Collagen, elastin, fibrillin
• SPECIALIZED PROTEINS
– Fibrillin, fibronectin, laminin
• PROTEOGLYCANS
– Long chains of repeating disaccharides
(glycosaminoglycans or mucopolysaccharides)
attached to special core proteins
Extracellular Matrix
• Provides :
– Mechanical support
– A biochemical barrier
– A medium for :
• Extracellular communication that is assisted
by CAMs
• The stable positioning of cells in tissues
through cell matrix adhesion
• The repositioning of cell migration during
cell development & wound repair
Extracellular Matrix
• Provides :
– Tensile strength for tendons
– Compressive strength for cartilage
– Hydraulic protection for many types
of cells
– Elasticity to the walls of blood
vessels
Cell adhesion molecules (CAMs)

• Belong mainly to glycoproteins


• Located at the cell surface and form
different types of complexes & junctions to
join :
– Cells to cells
– Cells to ECM
– ECM to the cell cytoskeleton
Cell Adhesion Molecules (CAMs)

• Assist :
– The adhesion of cells to one another to
provide organized tissue structure
– The transmission of extracellular cues
and signals across the cell membrane
– The migration of cells through the
regulation of CAM assisted adhesions
COLLAGEN
Collagen

• Most abundant protein in the world


• Major component of most connective
tissues
• Provide extracellular framework
• In human – 19 types
• Subdivided into classes
Collagen
• Dispersed as a gel  give support to the
structure as in ECM or vitreous humor of
the eye

• Bundled in tight, parallel fibers that provide


great strength as in tendons
Types of Collagen
• FIBRIL-FORMING COLLAGENS

– Types I, II & III


– Rope-like structure
Types of Collagen
• NETWORK-FORMING COLLAGENS

– Types IV & VII


– Form 3-D mesh
– Major part of basement membranes
Types of Collagen
• FIBRIL-ASSOCIATED COLLAGENS

– Types IX & XII


– Bind to the surface of collagen
fibrils, linking these fibrils to one
another and to components in the
ECM
Collagen
• Collagen I
– Major collagen of skin & bone

• Collagen II
– Major collagen of cartilage

ALL COLLAGEN TYPES HAVE A


TRIPLE HELICAL STRUCTURE
Collagen Type I
• Contain ~1,000 amino acids
• Entire molecule is triple helical
• Type IV – discontinuous (globular
structure interspersed)
• Tensile strength
Collagen Type I
• Each polypeptide sub-unit or alpha chain is
twisted into a left-handed helix of 3 residues
per turn

• Three of these alpha chains are then wound


into a right-handed superhelix  rod-like
molecule
Collagen Type I
• Characteristic : occurrence of
GLYCINE residues at every 3rd
position of the triple helical portion of
the alpha chain

• Gly – X – Y – Gly – X – Y -
a.a. sequence
Collagen Type I
• Necessary because glycine is the only a.a.
small enough to be accommodated in the
limited space available in the central core of
the triple helix

• X,Y = any other a.a.


• X 100 = proline & Y 100 = hydroxyproline
 confer rigidity
Collagen Type I

• Hydroxylysine is also found


• “quarter staggered”  banded appearance
• STABLE  non-covalent cross-links
within & between the triple helical units
• Important enzyme : lysyl oxidase
• Process : deamination
Biosynthesis of Collagen
• Complex
• Many posttranslational events 
hydroxylation of proline & lysine
• Cardinal principle : SELF ASSSEMBLY
• Synthesized on the ribosomes in a precursor
form  PREPROCOLLAGEN
Biosynthesis of Collagen

• Preprocollagen (ribosomes) – contains a


lead or signal sequence that directs the
polypeptide chain into the endoplasmic
reticulum

• Leader segment is enzymatically removed –
ER

• Hydroxylation of proline & lysine residue
and glycosylation of hydroxylysine – ER

• PROCOLLAGEN – with polypeptide
extensions both amino and carboxyterminal
ends
– Not present in mature collagen
– Extensions peptide contains cysteine residues

• Amino terminal polypeptide – form
intrachain disulfide bonds
• Carboxyterminal end – form both intra- &
interchain disulfide bonds
• Disulfide bonds – assists in the registration
of the 3 collagen molecules to form the
triple helix, winding from the carboxy
terminal end

• Triple helix – no further hydroxylation of
the proline or lysine or glycosylation of the
hydroxylysine takes place

• Secretion by the Golgi apparatus

• Extracellular enzymes – PROCOLLAGEN
AMINOPROTEINASE (amino) &
PROCOLLAGEN
CARBOXYPROTEINASE (carboxyl)

• Remove extension peptides at the terminal
ends (cleavage sites : crypts of the cell
membrane)

• Propeptides are removed

• Triple helical collagen molecule
spontaneously assemble into the collagen
fibers

• Further stabilized by inter- & intrachain
cross-links

• Collagen once formed  metabolically
stable

• Increase breakdown in starvation &


inflammation
BIOMEDICAL IMPORTANCE
• GENETIC DISEASES
– Causes
• Mutation in the collagen genes
(30)
• Mutation in the genes encoding
enzymes in the
posttranslational modification
BOMEDICAL IMPORTANCE
• EHLERS-DANLOS SYNDROME
– Clinical features : hyperextensibility of the
skin, abnormal tissue fragility, increase in joint
mobility
– Type IV (11 types) – most serious because of
the tendency to rupture spontaneously, arteries
or bowel (abnormality in the Type III collagen)
BIOMEDICAL IMPORTANCE
• EHLERS-DANLOS SYNDROME
– Type VI – deficiency of lysyl hydroxylase, with
marked hypermobility of the joints & tendency
to ocular rupture
– Type VIIC – deficiency of procollagen N-
proteinase; with abnormal, thin, irregular
collagen fibrils, marked joint hypermobility and
soft skin
BIOMEDICAL IMPORTANCE
• ALPORT’S SYNDROME
– Type IV collagen affected (major
collagen found in the basement
membrane of the renal glomeruli)
– Hematuria  ESRD
BIOMEDICAL IMPORTANCE
• EPIDERMOLYSIS BULLOSA
– Minor trauma  skin breaks & blisters
– Affects type VII collagen (form delicate fibrils
that anchor the basal lamina to collagen fibrils –
dermis)
– Decrease the number of anchoring fibrils 
blistering
BIOMEDICAL IMPORTANCE
• EPIDERMOLYSIS BULLOSA
SIMPLEX

• Another variant
• Due to mutations in keratin 5
BIOMEDICAL IMPORTANCE
• SCURVY
– Deficiency of ascorbic acid
– Not genetic
– Bleeding gums, subcutaneous hemorrhage &
poor wound healing
– Impaired synthesis of collagen due to the
deficiencies of prolyl & lysyl hydroxylase
(require ascorbic acids as co-factor)
ELASTIN

ELASTIN
• Responsible for extensibility & elastic
recoil in tissues
• Not as widespread as collagen
• Present in the lungs, arterial blood vessel &
some elastin ligaments
• Smaller quantity in the skin, ear cartilage
• Only 1 genetic type
Biosynthesis of Elastin
• Tropoelastin ( not synthesized in a preform
with extension peptides)

• Some prolines are hydroxylated to
hydroxyproline by prolyl hydroxylase
(OH-lys & glycosylated OH-lys not present)

• Secretion from the cells lysyl residues of
tropoelastin are oxidatively deaminated to
aldehydes by lysyl oxidase (same as
collagen)

• Major cross-links formed are
DESMOSINES result from condensation of
3 of the lysine-derived aldehydes with an
unmodified lysine to form a tetrafunctional
cross-link unique to elastin)

• Mature, extracellular form (elastin is highly
soluble & extremely stable with very low
turnover rate)
• Presence of a variety of random recoil
conformation – permit elastin to stretch &
recoil
Collagen Elastin
Many different genetic One genetic type
types
Triple helix Random coil
conformations
permit stretching
(Gly-X-Y)n repeating None
structure
Collagen Elastin
Hydroxylysine None
Carbohydrate-containing None
Intramolecular aldol Intramolecular
cross-links desmosine
cross-links
Extension peptides None
during biosynthesis
Muscular artery (Elastin stain)

Biomedical Importance
• WILLIAM’S SYNDROME
– Deletion in elastin gene (7q11.23)
– Affect connective tissue and central
nervous system
– Supravalvular aortic stenosis
Biomedical Importance
• SKIN DISORDERS
– Accumulation of elastin (scleroderma)

• PULMONARY EMPHYSEMA. CUTIS


LAXA & AGING
– Decrease/ fragmentation of elastin
Biomedical Importance
• -1 ANTITRYPSIN DEFICIENCY
– Normal lung - alveoli are chronically exposed
to low levels of neutrophil elastase
– Proteolytic activity can destroy the elastin in
the alveolar walls if unopposed by the
inhibitory action of -1-AT
– Deficiency sec to mutations in the -1 gene 
emphysema
– Especially smokers
FIBRILLLIN

Fibrillin
• Large glycoprotein
• Structural component of microfibrils (10-
12nm filaments)
• Secreted into the ECM by fibroblasts 
incorporated into insoluble microfibrils
• Provide a scaffold for the deposition of
elastin
Fibrillin

• Found in the zonula fibers of lens,


periosteum
• Associated with elastin fiber in the
aorta
Biomedical Importance
• MARFAN’S SYNDROME
– Frequently inherited connective tissue
disorder
– Autosomal dominant trait
– Ectopia lentis
– Skeletal system : tall, long digits
(arachnodactyly), hyperextensibility of
joints
– CVS dilated ascending aorta secondary to
weakness of aortic media
Biomedical Importance
• MARFAN’S SYNDROME

– Mutation in Chromosome 15 (genes for


fibrillin)
– Long, contractural arachnodactyly –
Chromosome 5
FIBRONECTIN
Fibronectin
• Major glycoprotein of ECM & found in
soluble form in the plasma
• 2 identical sub-units joined by 2 disulfide
bridges into functional carboxyterminals
• Has 3 types of repeating motifs (I, II & III)
organized into functional domains
Fibronectin
• Function on domains including heparin &
fibrin, collagen, DNA & cell surfaces
• Contain Arg-Gly-Asp (RGD)sequence that
binds to the receptor
• Sequence is shared by other proteins in the
ECM that bind to integrins (a type of
transmembrane proteins present in cell
surfaces)
Fibronectin
• Fibronectin receptor interacts indirectly
with actin (microfilaments)
• Attachment of proteins
• Attachment & interaction – important
because it affects cell behaviour
• Adhesion molecules, cell migration
(provide binding site)
LAMININ

• Laminin 1 is present on capillaries and in the rim of


muscle fibers
Laminin
• Major protein component of renal glomerular &
other basal laminae  surround epithelial cells
• Glomerular membrane – epithelium = basal
lamina = endothelium
• Primary components of basal lamina : laminin,
entactin & type IV collagen & GAGs heparin or
heparin sulfate
• Synthesized by the underlying cells
Laminin
• Consists of 3 distinct elongated polypeptide
chains (A, B1 and B2) linked together to
form an elongated cruciform shape
• Presence of binding cells – cell shape
• Collagen interacts with laminin  interacts
with integrin or other laminin receptor
proteins
• Anchor lamina to the cells
Laminin
• ENTACTIN
– “nidogen”
– Glycoprotein
– Contains RGD sequence
– Binds to laminin
– Major cell attachment factor
Biomedical Importance of
Laminin
• KIDNEY – basal lamina is thick
• Important role in glomerular filtration
• Regulates passage of large molecules (most
plasma proteins) across glomerulus 
renal tubule
• Allows small molecules to pass like water
Laminin

• Laminin 1 chain in the normal human kidney


Biomedical Importance of
Laminin
• ALBUMIN
– Pores in the glomerular membrane are large
enough to allow ~8nm molecule to pass
through
– Albumin is smaller but because of the negative
charges of heparin sulfate & some sialic acid-
containing glycoproteins in the basal lamina 
albumin is repelled
Biomedical Importance of
Laminin

• GLOMERULONEPHRITIS
– Antibodies destroy GM
– Allows disposition of macromolecules
– Albuminuria
PROTEOGLYCANS
and
GLYCOSAMINOGLYCANS
Proteoglycans
• Proteins with covalently linked GAGs
• Vary in tissue distribution
• Vary in nature of core proteins, attached
GAGs & function
• Core proteins are proteins bound covalently
to GAGs
Proteoglycans

• Amount of carbohydrate is greater than in glycoproteins


(95% of its weight)
• E.g. aggrecan = major type in cartilage, contains long
strand of hyaluronic acid (GAG) to which link proteins are
attached non-covalently
7 GLYCOSAMINOGLYCANS
1. Hyaluronic acid
2. Chondroitin sulfate
3. Keratan sulfate I
4. Keratan sulfate II
5. Heparin
6. Heparan sulfate
7. Dermatan sulfate
Glycosaminoglycans
• Differ in
– number of amino sugar composition
– uronic acid composition
– linkages between components
– chain length of disaccharides
– presence of sulfate groups
– position of attachment to constituent sugars
Glycosaminoglycans
• Unbranched polysaccharides made up of
repeating disaccharides
• One component is always an aminosugar
– D-glucosamine
– D-galactosamine
Glycosaminoglycans
• Other component of the repeating
disaccharides (except keratan sulfate) is
uronic acid
• All GAGs contain a sulfate group (except
hyaluronic acid)
– L-glucoronic acid
– 5’ epimer, L-iduronic acid
• O-esters in heparin
• N-sulfate in heparan sulfate
Harper
• Table 48-6
• Major properties of the GAG
Biosynthesis of GAGs

1. Attachment to core proteins


2. Chain elongation
3. Chain termination
4. Further modifications
Biosynthesis of GAGs
• ATTACHMENT TO CORE PROTEINS
– Occurs in the ER
– 3 types of linkages (GAG – core CHON)
• O-glycosidic bond between xylose & serine
• O-glycosidic bond between N-
acetylgalactosamine & serine (or Thr)
• N-glycosylamine between N-
acetylglucosamine & the amide nitrogen of
Asn, as found in N-linked glycoproteins
Biosynthesis of GAGs
• ATTACHMENT TO CORE PROTEINS
• O-glycosidic bond between xylose & serine
• Bond unique to proteoglycans
• Formed by transfer of Xyl residue to Ser
from UDP-xylose  2 resideues of Gal +
Xyl residue  link trisaccharide
• Gal-Gal-Xyl-Ser
• Further chain growth on the terminal Gal
Biosynthesis of GAGs

• CHAIN ELONGATION
– Nucleotide sugars & highly specific Golgi-
located glycotransferases are employed to
synthesize the oligosaccharide chains of GAGs
– “ONE ENZYME, ONE LINKAGE”
relationship
– Occurs in the golgi apparatus
Biosynthesis of GAGs
• CHAIN TERMINATION
– Result from
• Sulfation
• Progression of the growing GAG chain
away from membrane site where
catalysis occurs
Biosynthesis of GAGs

• FURTHER MODIFICATIONS
– Introduction of the sulfate group
– Occurs in the golgi apparatus
– Highly specific
Functions of Proteoglycans
• Some bind to collagen or elastin – important
structural organization of ECM
• Some interact with adhesive proteins- fibronectin
& laminin
• GAGs polyanions – bind to Na & K  attract
water by osmotic pressure  cell turgor
• Act as sieves – restrict passage of large
macromolecules  able to gel
• Occupy large area of the ECM
Specific Functions
Hyaluronic Acid
• Unbranched chain of repeating
disaccharide units containing GluUA
& GlcNAc
• During embryogenesis, permit cell
migration during morphogenesis &
wound repair
• In cartilage, provide compressibility
Chondroitin Sulfate

• Repeating disaccharide contains


GlcUA & GalNAc
• At sites of calcification in the
endochondral bone & cartilage
• Provide endoskeletal structure
• Neurons – maintain shape
Keratan Sulfates I & II

• Repeating Gal-GlcNAc disaccharide


units containing sulfate attached to 6’
position of GlcNAc or occasionally of
Gal
• Cornea – critical role in corneal
transparency
Dermatan Sulfate
• Structure similar to chondroitin sulfate,
except that in place of GlcUA in -1,3
linkage to GalNac, it contains IdUA

• Sclera – maintains the overall shape of


the eye
Heparin
• Repeating disaccharides contain
glucosamine & either of the two uronic
acids (~90% are IdUA)
• Important anticoagulant
• Binds to
– Factor IX
– Factor XI
– Plasma antithrombin III
Heparan Sulfate

• Contains glucosamine with fewer N-


sulfates than heparin
• Predominant uronic acid is GlcUA
• Acts as receptors
• Participate in mediation of cell growth
& cell-cell communication
Aging/ Disease
• Hyaluronic acid- important in permitting
migration of tumor cells through the ECM
• Dermatan sulfate – important role in the
development of atherosclerotic plaques
• In arthritis – act as autoantigens
• Chondroitin sulfate diminishes with age in
cartilage
• Osteoarthritis – keratan sulfate & hyaluronic acid
increases in cartilage
Mucopolysaccharidoses
• Adult tissues – GAG have a slower turnover
• Half-lives : days to weeks
• Specific enzyme deficiencies result in
certain inborn errors of metabolism
• Degradation of GAG carried out by
lysosomal hydrolysis
– Endoglycosidases
– Exoglycosidases
– Sulfatases
Mucopolysaccharidoses
• Common : autosomal recessive
• Most studied : Hurler’s & Hunter’s
Syndromes
• None are common
• Dx : urine assay, tissue autopsy
Muculipidoses
• Combined features common to both muco- &
sphingolipidoses
• Signs & symptoms :
– Cloudy corneas
– Mental retardation
– Stiff joints
– Cardiac abnormalities
– Hepatosplenomegaly
– Short stature – depend on specific disease & severity
Muculipidoses
• PATHOPHYSIOLOGY
– Mutations in a gene encoding a lysosomal
hydrolase involved in the degradation of 1 or
more GAGs 
– Defective lysosomal hydrolase 
– Accumulation of substrate in various tissues –
liver, spleen, bone, skin & CNS
BONE
&
CARTILAGE
BONE & CARTILAGE
• Specialized forms of ECM
• Major constituents of bone
– Collagen I
– Hydroxyapatite
• Major constituents of cartilage
– Collagen II
– Certain proteoglycans
BONE
• Inorganic or mineral component – mainly
crystalline hydroxyapatite with Na, Mg,
CO3 & Fl
• Contains ~99% of the body’s Ca
• Hydroxyapatite
– Bone strength
– Resilience
BONE
• Dynamic
• Continuous cycles of remodeling
– Resorption  deposition of new
bone tissues
• Major cell types
– Osteoclasts  resorption
– Osteoblasts  deposition
BONE
• Osteoblasts : synthesize most of
proteins found in bone
• Control mineralization
• Many factors are involved in the
regulation of bone metabolism
• Stimulation/ inhibition – clasts/ blasts
BONE

• Black areas – POLYMER (collagen fibers)


• White areas – mineralized mineral (hydroxyapatite crystals)
Bone

• Microstructure of collagen fibers in a


hydroxyapatite matrix
BONE
Metabolic & Genetic Disorders
• OSTEOGENESIS IMPERFECTA
– Brittle bones
– Abnormal fragility of the bones
– sclerae thin & transluscent & appears blue
secondary to deficiency of connective tissue
– Mutations result in decreased expression of
collagen or abnormal pro-alpha chains 
weakening of the overall structure of the bone
BONE
Metabolic & Genetic Disorders
• OSTEOPETROSIS (marble bone disease)
– Increased bone density
– Due to inability to resorb bone
– May occur with RTA & cerebral calcification
– Due to mutations in gene encoding carbonic
anhydrase II
BONE
Metabolic & Genetic Diseases
• OSTEOPOROSIS
– Generalized progressive reduction in
bone tissue mass per unit volume
causing skeletal weakness
– Fractures very easily
– Possible causes : estrogens &
interleukin-1 & -6
CARTILAGE
• Avascular tissue
• Obtains most nutrients from synovial fluid
• Exhibits slow but continuous turnover
• Principal protein -Type II collagen
• Proteoglycan – important role in its
compressibility
• Aggrecan – major proteoglycan
Cartilage

• FPch – fibrous perichrondrium


• CHl – chondrogenic cells
• ChB – outer layer – active matrix producing chrondroblasts
• Lac – lacuna – surrounded by matrix
• CN – “cell nests” - less metabolic activity
CARTILAGE
Metabolic & Genetic Disorders
• CHONDRODYSPLASIA
– Mixed group of hereditary disorders affecting
cartilage
– Manifestations : short-limbed dwarfism &
numerous skeletal deformities
– Best known : ACHONDROPLASIA
CARTILAGE
Metabolic & Genetic Disorders
• ACHONDROPLASIA
– Most common cause of dwarfism
– Short limbs
– Normal trunk size
– Macrocephaly
– Other skeletal deformities
– Autosomal dominant trait (mutations)
– Very specific mutations in the gene encoding
FGFR3 (fibroblast growth factor receptor 3)

THANK YOU
References
• Chapter 48 Harper
• Lipincott
quiz
1. What is the most abundant protein in the
world and a major component in most
connective tissues?

2. What component of you ECM consists of 3


distinct elongated polypeptide chains (A,
B1 and B2) linked together to form an
elongated cruciform shape?
3. What is the major constituent of bone
(collagen type I or II)?

4 & 5. Give 2 functions of your ECM.

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