Chapter 1: Cells: PLM-BSN 2019-2020 (TORTORA SUMMARY)
Chapter 1: Cells: PLM-BSN 2019-2020 (TORTORA SUMMARY)
CHAPTER 1: CELLS ● some proteins are tightly attached to only one side of
the bilayer 🡪 covalent bonding to fatty acids
PLM-BSN 2019-2020 (TORTORA SUMMARY)
● amphipathic as well
● GLYCOPROTEINS = proteins with carbohydrate
CELLS = living structural and functional units enclosed by a groups (straight/branched oligosaccharides) that
membrane protrude to the ECF
● all cells arise from older cells through CELL DIVISION
● CELL BIOLOGY/CYTOLOGY = study of cellular PERIPHERAL PROTEINS
structure and function ● not embedded into bilayer
● attached to polar heads or to integ. proteins
3.1 PARTS OF A CELL
basic parts of a cell… *GLYCOCALYX = extensive sugary coat formed by
1. PLASMA MEMBRANE carbohydrate groups of glycolipids and glycoproteins
- flexible outer surface of cell ( ext. | int, ) ● pattern of carbs is diff for each cell = molecular
- selective 🡪 regulates internal env. of cell “signature” 🡪 cell recognition
conducive for cellular activities ● allows cells to adhere to one another
- key role in cell communication (w/ other cells or ● protects cells from being digested by enzymes
their ext. env.)
● hydrophilic 🡪 film of fluid on surface of many cells
2. CYTOSOL
(e.g. RBC smoothly passing one another; cells lining
(1) CYTOPLASM = fluid portion; contains water,
GI tract and airways moist)
ions, particles, solutes
(2) ORGANELLES = distinctive shape + specific fxn
Functions of Membrane Proteins
3. NUCLEUS
● membrane proteins differ in different types of cells
- houses most of cell’s DNA
depending on its function vs. membrane lipids which
- contains CHROMOSOMES (1 strand of dna +
vary only slightly
assoc. proteins) w/c contains thousands of units
of GENES
integral proteins serve as…
o nucleus controls most of cellular fxn &
1. ION CHANNELS = allows ions to pass through;
structure
mostly selective (only 1 type of ion)
e.g.: K+ channels
3.2 PLASMA MEMBRANE
2. CARRIERS/TRANSPORTERS = selectively moves
PLASMA MEMBRANE
ions through the membrane; changes shape
● flexible yet sturdy
3. RECEPTORS = recognizes and binds a specific
● best described using FLUID MOSAIC MODEL:
molecule (ligand) 🡪 alters cell function
“composed of continually moving sea of LIPIDS
e.g. insulin receptors
intersped with many diff. PROTEINS”
4. ENZYMES = catalyzes chemical reactions/process
o LIPIDS 🡪 allows lipid-soluble, non-polar
inside or outside the cell
particles; blocks water-soluble, polar
5. LINKERS = links cell to other cells w/ other cell’s
particles
membrane protein or protein filaments
o PROTEINS 🡪 transports some
6. CELL-IDENTITY MARKERS = glycoprotein &
polar/water-soluble/charged particles; comm.
glycolipids 🡪 glycocalyx
between intercellular and extracellular
e.g.: ABO blood type markers
proteins
peripheral proteins serve as…
STRUCTURE OF PLASMA MEMBRANE
1. ENZYMES
The Lipid Bilayer
2. LINKERS
● two back-to-back layers of lipids
3. CELL-IDENTITY MARKERS
● have both polar and nonpolar parts 🡪amphipathic
4. SUPPORT to the plasma membrane
- phospholipid heads face ECF & ICF; fatty 5. ANCHOR for integral proteins
acid-tails face each other = 6. participate in MECHANICAL ACTIVITIES
● glycolipids only appear @ outer layer 🡪 asymmetric
MEMBRANE FLUIDITY
lipid polar Nonpolar ● allows most membrane lipids and proteins to move
PHOSPHOLIPIDS phosphorous – two fatty acid tails about; neighboring components can easily switch
(75%) containing head places BUT not transfer from inner to outer layer
CHOLESTEROL -OH group stiff steroid ring; ● excellent compromise for the cell (TOO RIGID = no
(20%) hydrocarbon tail movement; TOO FLUID = no support)
GLYCOLIPIDS carbohydrate head fatty acid tail ● allows transport of materials into and out of the cell
(5%) ● allows cellular activity within the membrane
● allows cell to self-seal when punctured =
Arrangement of Membrane Proteins intracytoplasmic sperm injection & cloning
INTEGRAL PROTEINS depends on…
● proteins that are embedded into lipid bilayer ● no. of double bonds in fatty acid tails of membrane
● TRANSMEMBRANE PROTEINS = proteins that lipids
protrude at both outer and inner layers of lipid; deeply
embedded
GBRM
o double bonds 🡪 kinks = spaces for ● may occur through membranes IF membrane is
movement; allows lipids to not be tightly permeable to the substances travelling through
packed ● Types: simple, facilitated, osmosis
● cholesterol = provides support
o @ normal temp 🡪 solid, firm FACTORS AFFECTING DIFFUSION
o @ lower temp 🡪 more fluid (1) steepness of gradient
MEMBRANE PERMEABILITY - steeper = faster
C.M. is selectively permeable… (2) temperature
lipid permeable to non-polar, uncharged molecules - higher = faster
bilayer (e.g.: oxygen, carbon dioxide, and steroids) (3) mass of solute
slightly permeable to small, uncharged - heavier = slower
molecules (e.g.: water & urea 🡪 passes through (4) surface area available for diffusion
gaps when lipids move) - more s.a. = faster
impermeable to polar, charged, and large (5) distance to be traveled
molecules (e.g.: glucose) - thinner membrane/ lesser = faster
membran increases permeability of C.M. to certain ions
e proteins (depends on type of channel/carrier) Simple Diffusion
*macromolecules 🡪 too large 🡪 endo-/exo- cytosis ● passive movement of particles through the C.M. w/o
the aid of proteins
GRADIENTS ACROSS THE PLASMA MEMBRANE ● uncharged, non-polar particles (oxygen, carbon
● allows/helps movement of particles through the C.M. dioxide, nitrogen) & small molecules (fatty acids,
● ELECTROCHEMICAL GRADIENT = combined effect steroids, fat soluble vitamins A,D,E,K)
of both concentration and electrical gradients ● small, polar particles (water, urea)
● route of (1) air exchange & (2) absorption of some
examples: ICF ECF
nutrients + excretion of some wastes
CONCENTRATION carbon dioxide oxygen
GRADIENT potassium sodium Facilitated Diffusion
= diff in concentration of ● route of particles that are too polar or highly charged
particles CP IN pockets
● passive movement of particles through the C.M.
= higher conc. 🡪 lower facilitated by integral membrane proteins that can
conc. (until =) either be a channel or a carrier
● sites for protein synthesis EXIT/TRANS FACE further modifies proteins, packaged
● name reflects high content of RIBOSOMAL RNA - concave, faces into:
(rRNA) 🡪 ribosomes; still contains 50 other proteins C.M. - SECRETORY VESICLES =
● composed of 2 subunits (1 larger) created separately undergoes exocytosis 🡪 releases
in the nucleolus & comes together @ cytosol proteins to ECF
- MEMBRANE VESICLES = transports
location synthesizes… proteins needed by the C.M.
attached to nuclear membrane proteins for specific - TRANSPORT VESICLES =
or endoplasmic reticulum organelles, for insertion in transports proteins to other organelles
C.M., or for export
free @ cytosol (free ribosomes) proteins for cellular Lysosomes
activities w/in cytosol ● membrane-enclosed vesicles formed from the golgi
attached to mitochondrial mitochondrial proteins complex that contain as many as 60 kinds of powerful
membrane/within mitochondria digestive and hydrolytic enzymes
● acidic pH (pH of 5) compared to cytosol (pH of 7)
Endoplasmic Reticulum - membrane has hydrogen pumps that transports
● a network of membranes in the form of flattened sacs hydrogen into organelle to help maintain acidity
or tubules that extend from the nuclear envelope ● releases final products of digestion to cytosol
● extensive (makes up more than half of the (glucose, fatty acids, and amino acids)
membranous content of cell) ● AUTOPHAGY = worn-out organelles digested by
(1) ROUGH E.R. lysosome
- extends from nuclear envelope - organelles are enclosed by membrane from E.R.
- ribosomes attached to outer surface (AUTOPHAGOSOME) and merges with
- sorts and processes proteins lysosome 🡪 digests worn-out organelle 🡪
- synthesizes phospholipids and glycoproteins releases digested components to cytosol for
ribosomes produce proteins 🡪 enzymes attach reuse
proteins to carbohydrates and phospholipids 🡪 - also used in cell differentiation, control of growth,
secreted via exocytosis/attaches to C.M. or tissue remodeling, adaptation to adverse env.,
membranes of other organelles and cell defense
(2) SMOOTH E.R. ● AUTOLYSIS = lysosome destroys entire cell
- extends from rough E.R. ● lysosomal act. USUALLY occurs w/in cell (e.g. sperm
- no ribosomes on surface BUT contains unique head releases lysosomal enzymes to aid oocyte
enzymes 🡪 more functionally diverse than r.E.R. penetration =ACROSOMAL REACTION)
- synthesizes fatty acids and steroids
Peroxisomes
location function ● also called MICROBODIES
● similar structure with lysosomes, but smaller
liver cells - help release glucose into bloodstream
● contains oxidases (enzymes that oxidize or remove
- help detoxify/inactivate lipid-soluble drugs
or potentially harmful substances H+ from a compound) 🡪 necessary in normal
metabolism (e.g. amino acids and fatty acids)
liver, kidney, - removes phosphate from
● byproducts of oxidation = H2O2 (hydrogen peroxide)
small glucose-6-phosphate to produce “free”
intestine and assoc. free radicals (superoxide) 🡪 toxic
glucose 🡪 bloodstream
● contains catalases (enzymes that break down H2O2)
muscle cells - calcium ions used to trigger contractions
and other enzymes that break down superoxide
come from SARCOPLASMIC RETICULUM
● can self-replicate and grow
(a form of smooth E.R.
Proteasomes
Golgi Complex
● responsible for the continuous breakdown of
● contains enzymes that modifies, packages, and sorts unneeded, faulty, or damaged proteins
proteins (most proteins formed by r.E.R. are
● barrel-shaped composed of 4 stacked rings of
transported to other organelles 🡪 first in transport proteins around a central core
pathway) ● contains proteases (enzyme that breaks down
● made up of 3-20 CISTERNAE (small, flattened proteins into peptides)
membranous sacs) 🡪 entry/cis face, medial cisterna, ● resulting peptides are further broken down by
exit/trans face enzymes in cytosol 🡪 amino acid 🡪 reused to build
● proteins pass through each cisternae through the new proteins
maturation of the cisterna ● tiny, but abundant in cytosol and nucleus
● more extensive in cells that secrete proteins ● only recently discovered
cisterna function Mitochondria
ENTRY/CIS FACE receives, proteins in vesicles from ● generates most of the ATP used by the cell through
- convex, faces rough E.R.; modifies proteins aerobic cellular respiration 🡪 powerhouse of the cell
rough E.R. ● composed of an outer and inner mitoch. membrane
MEDIAL CISTERNA attaches glucose or lipids to proteins with a space between them
🡪 glycoproteins and lipoproteins - inner mitoch. membrane have cristae 🡪 allows
extensive surface area for chem. reactions
GBRM
- inner mitoch. membrane contains the ● more nucleoli in cells that need more protein (muscle
MITOCHONDRIAL MATRIX (central, fluid-filled cells, liver cells)
cavity) ● a bundle of protein, DNA, and RNA not enclosed by a
● plays an imp’t role in APOPTOSIS (programmed cell membrane
death due to stimuli such as high amt of free radicals, ● disperses during cell division and reorganizes once
DNA damage, deprivation of growth factor, or lack of new cells are formed
oxygen or other nutrients)
- releases enzyme cytochrome c (used in cellular 3.6 PROTEIN SYNTHESIS
respiration) to cytosol through a pore in the outer ● cells synthesize PROTEINS 🡪 proteins determine
mitoch. membrane 🡪 causes digestive enzymes CELL STRUCTURE & FUNCTION 🡪 organism
to breakdown cell ● PROTEINS = building blocks of diff cellular structures;
● has the ability to self-replicate during times of high hormones; enzymes; transporters
cellular activity (e.g. muscle cells) ● PROTEOME = all proteins in an organism
● has own ribosomes (produce mitoch. proteins needed ● occurs in 2 steps: TRANSLATION &
in C.R.) and its own DNA (circular w/ 37 genes; TRANSCRIPTION
controls synthesis of 2 rRNAs, 22 tRNAs, and 13 ● DNA & RNA store genes as sets of 3 NUCLEOTIDES
proteins that build mitoch. components) o DNA 🡪 BASE TRIPLET 🡪complementary
● mitoch. DNA can only be inherited from mother CODON
● GENETIC CODE
3.5. NUCLEUS
NUCLEUS TRANSCRIPTION
● spherical or oval body; usually most prominent ● part of DNA strand is transcribed into an RNA
● cells usually contain 1 nucleus; some cells have more RNAs needed in the process…
than 1 (e.g. skeletal muscle cells) (1) mRNA = messenger RNA; directs protein synthesis
● controls cellular structure and function; directs cellular (2) rRNA = ribosomal RNA; joins with ribosomal proteins
activities; produces ribosomes in nuclei to form ribosomes
● contains most of the cell’s GENES (hereditary units) (3) tRNA = transfer RNA; one end = amino acid & other
arranged along CHROMOSOMES (somatic cells have end = ANTICODON (set of 3 nucleotides that has
46 chromosomes 🡪 23 from each parent) corresponding codons in DNA)
● RNA POLYMERASE = enzyme that catalyzes
transcription of a strand of DNA; binds & leaves DNA
strand through special nucleotide sequences:
o starts @ PROMOTER
o ends @ TERMINATOR
● complementary pairing of base triplets and codons:
Template DNA base Complementary
sequence RNA base
sequence
A (Actin) U
T (Thymine) A
G (Guanine) C
C (Cytosine) G
NUCLEOLI
● one or more spherical bodies in nucleus
● sites of synthesis of RNA and assembly of rRNA and
protein into ribosomal subunits 🡪 released to cytosol
to form ribosomes
GBRM
phase events
G1 - interval bet. mitotic phase and S phase
- metabolically active 🡪 cytosolic components are
duplicated (centrosomes begin)
- all cellular activities described occurs here
- G0 PHASE = cells in G1 for long time
S - synthesis of DNA (duplication) = daughter cells
have same genetic material
- strands of DNA separate @ hydrogen bonds and
bonds with newly synthesized nucleotides with
complementary codons to form new DNA
G2 - cell continues to grow
- enzymes and proteins needed during cell division
will be synthesized
- replication of centrosomes is completed
Mitotic Phase
● results in the formation of 2 identical cells
● 2 forms of division: nuclear and cytoplasmic
(2) MEIOSIS II
● Prophase II, Metaphase II, Anaphase II, Telophase II
● similar to mitotic cell division