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MycologyAtlas Contents

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Contents

Preface vi
Presentation of Mycology Proficiency Testing Data viii
Collection, Transport, and Culturing of Clinical Specimens for Fungi 1
Yeast 3
Candida albicans, 4
Candida dubliniensis, 9
Candida guilliermondii Complex, 12
Candida lusitaniae, 15
Candida parapsilosis Complex, 17
Candida haemulonii Complex, 19
A Closer Look At … Candida auris, 21
Candida zeylanoides, 22
Candida kefyr, 24
Candida rugosa and Candida pararugosa, 26
Candida krusei, 31
Candida lipolytica, 34
Candida tropicalis, 36
Candida glabrata Complex, 39
Candida famata, 42
Cryptococcus Species, 45
Rhodotorula Species, 52
Saccharomyces cerevisiae, 55
Malassezia Species, 57
Wickerhamomyces anomalus (Formerly Candida pelliculosa), 61
Ustilago Species, 63
Sporobolomyces salmonicolor, 65
Blastoschizomyces capitatus, 67
Trichosporon Species, 71
Prototheca Species, 73
Pneumocystis jirovecii, 75
Hyaline Molds 77
A Closer Look At … Mold Descriptions, 78
Aspergillus clavatus, 80
Aspergillus flavus, 83
Aspergillus fumigatus, 87
Aspergillus glaucus, 92
Aspergillus nidulans, 94
Aspergillus niger Complex, 99
Aspergillus terreus Complex, 103
Aspergillus ustus, 108
Aspergillus versicolor, 112
Penicillium Species, 117
Paecilomyces Species, 121
Scopulariopsis Species, 124
Gliocladium Species, 126

iii
Trichoderma Species, 129
Beauveria Species, 131
Verticillium Species, 135
Acremonium Species, 136
Fusarium Species, 139
Trichothecium roseum, 143
Pestalotiopsis Species, 145
Chrysosporium Species, 147
Sepedonium Species, 151
Arthrinium Species, 153
Geotrichum Species, 155
Malbranchea Species, 158
Dermatophytes 163
A Closer Look At … History of Mycology of Dermatophytes, 164
Epidermophyton floccosum, 166
Microsporum audouinii, 170
Microsporum canis, 173
Microsporum ferrugineum, 177
Microsporum gypseum Complex, 179
Microsporum nanum, 182
Microsporum persicolor, 184
Microsporum vanbreuseghemii, 187
Trichophyton ajelloi, 189
Trichophyton megninii, 191
Trichophyton mentagrophytes, 193
Trichophyton rubrum, 196
Trichophyton soudanense, 200
Trichophyton tonsurans, 203
Trichophyton verrucosum, 207
Trichophyton violaceum, 210
A Closer Look At … Dermatophyte-Like Infections, 212
Dimorphic Fungi 213
Sporothrix schenckii Complex, 214
Histoplasma capsulatum, 219
Talaromyces marneffei (Formerly Penicillium marneffei), 225
Blastomyces Species, 227
Emmonsia Species, 231
Coccidioides Species, 234
Cokeromyces recurvatus, 238
Paracoccidioides brasiliensis Complex, 240
Mucormycetes 243
A Closer Look At … Patterns of Infection, 244
Rhizopus Species, 250
Mucor Species, 254
Lichtheimia corymbifera Complex (Formerly Absidia Species), 259
Apophysomyces Species, 262
Saksenaea Species, 264
Cunninghamella Species, 266
Syncephalastrum racemosum, 268
Basidiobolus Species, 271
Conidiobolus Species, 273

iv Contents
Dematiaceous Fungi 275
A Closer Look At … Patterns of Infection, 276
Exophiala Species, 278
Hortaea werneckii, 283
Madurella mycetomatis, 285
Piedraia hortae, 287
Aureobasidium pullulans, 289
Hormonema dematioides, 292
Neoscytalidium Species (Formerly Scytalidium Species), 294
Stachybotrys Species, 297
Fonsecaea Species, 299
Phialophora Species, 303
Cladosporium Species, 307
Cladophialophora bantiana, 310
Cladophialophora boppii, 312
Cladophialophora carrionii, 315
Scedosporium Species Complex (Formerly Pseudallescheria boydii Complex), 317
Lomentospora prolificans (Formerly Scedosporium prolificans), 321
Verruconis Species (Formerly Ochroconis Species), 324
Curvularia Species, 326
A Closer Look At … Sympodial Genticulate Growth, 329
Bipolaris Species, 330
Exserohilum Species, 332
A Closer Look At … Germ Tube Testing, 336
Alternaria Species, 338
Pithomyces Species, 342
Epicoccum Species, 345
Ulocladium Species, 348
Nigrospora Species, 350
Microascus Species, 352
A Closer Look At … Fruiting Bodies, 354
Chaetomium Species, 356
Phoma Species, 359
Identification Methods for Fungi 363
Product and Manufacturer Index, 369
Appendix 371
F1 Survey, 2000-2016, 371
F Survey, 2000-2016, 372
2018 CAP Master Lists, 374
Index 377

Contents v

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