Clinical Epidemioogy Lecture Series 1
Clinical Epidemioogy Lecture Series 1
CLINICAL EPIDEMIOLOGY -1
Dr. Asiimwe (MPH), Public Health Department, KIU; +256750319914
CLINICAL EPIDEMIOLOGY
2
Course Outline
4) Descriptive Epidemiology
6) Analytical Epidemiology
Training Objectives
By the end of the Training, Students will be able to;
1) a) Define Clinical Epidemiology;
b) Distinguish between Classic/Field Epidemiology & Clinical
Epidemiology;
& c) Role/ Purpose of Epidemiology
3) Determine frequency & burden of disease; Measure of
morbidity /disease & Mortality/death.
4) Know and explain the Ice-Burg Phenomenon
5) Discuss disease screening and screening test in epidemiology;
That guides diagnosis, prognosis & treatment of patients.
6) Describe Distribution of Disease in terms of persons affected,
Place & Time of occurrence.
CLINICAL EPIDEMIOLOGY; Training Objectives, CONT;
4
Period Prevalence =
(𝑁𝑜.𝑜𝑓 𝑑𝑖𝑠𝑒𝑎𝑠𝑒𝑑 𝑐𝑎𝑠𝑒𝑠 𝑖𝑛 𝑎 𝑝𝑜𝑝𝑢𝑙𝑎𝑡𝑖𝑜𝑛 𝑑𝑢𝑟𝑖𝑛𝑔 𝑎 𝑔𝑖𝑣𝑒𝑛 𝑡𝑖𝑚𝑒 𝑝𝑒𝑟𝑖𝑜𝑑)
𝑋100
(𝑇𝑜𝑡𝑎𝑙 𝑝𝑜𝑝𝑢𝑙𝑡𝑖𝑜𝑛 𝑑𝑢𝑟𝑖𝑛𝑔 𝑡𝑒 𝑠𝑎𝑚𝑒 𝑡𝑖𝑚𝑒 𝑝𝑒𝑟𝑖𝑜𝑑)
Prevalence Odds:
(𝑁𝑜.𝑜𝑓 𝑑𝑖𝑠𝑒𝑎𝑠𝑒𝑑 𝑐𝑎𝑠𝑒𝑠 𝑖𝑛 𝑎 𝑝𝑜𝑝𝑢𝑙𝑎𝑡𝑖𝑜𝑛 𝑎𝑡 𝑎 𝑔𝑖𝑣𝑒𝑛 𝑝𝑜𝑖𝑛𝑡 𝑖𝑛 𝑡𝑖𝑚𝑒)
=
(𝑁𝑜.𝑜𝑓 𝑁𝑜𝑛− 𝑐𝑎𝑠𝑒𝑠 𝑖𝑛 𝑎 𝑝𝑜𝑝𝑢𝑙𝑎𝑡𝑖𝑜𝑛 𝑎𝑡 𝑡𝑎𝑡 𝑝𝑜𝑖𝑛𝑡 𝑖𝑛 𝑡𝑖𝑚𝑒)
NB: Lifetime Prevalence (LTP) is the proportion of individuals in a population
that at some point in their life (up-to point of assessment) have ever experienced
a health event, risk factor or disease.
PART A: MEASURE OF MORBIDITY; PREVALENCE
Case1:
17 There was 75 cases of childhood Tuberculosis (TB) at the
beginning on a 2nd quarter FY 2022/23. If 140 new cases of childhood
TB were reported in the 2nd quarter and OPD attendance during this time
composed of 525 children, determine the prevalence of childhood TB.
Case 3: Out of 400 BMS 3.1 students, 100students had a common cold
at the beginning of Nov.2021. The number of students with common cold
had risen to 130 by 20th Nov. 2021. a) What was the prevalence of
common cold among students at the beginning of Nov. 2021; b) Calculate
the prevalence of common cold among students in the a period of 1st –
20th Nov. 2021. c) Calculate the Prevalence odds of common cold among
PART A: MEASURE OF MORBIDITY
Incidence- number of new cases of a disease in a specific population
18
at risk during a given time period.
Incidence is proxy for Risk (prob. of occurrence of disease in a
disease free population during a specified time period)
Measures of Incidence:
Case 4: A study X enrolled 4340 sexually active HIV free Ugandans at the
beginning of 1999 and screened them for HIV after exposure at the end of the
year. Results of the study were as indicated in Tab. 01.
HIV +ve HIV –ve Total
Total 90 4250 4340
Determine the;
a) risk of acquiring HIV in Uganda (1999).
b) Incidence odds of acquiring HIV in Uganda using the case above.
Case 5: B1: During the first phase of COVID-19 in 2020, Bushenyi district
reported 26 new active cases of COVID-19 and a cumulative number of 264
cases of COVID-19 1st July – 31st Dec.2020 . If the mid-year district population
was 183,000, What was the; a) Number of existing cases of COVID-19, b) Risk
of contracting COVID-19; b) period Prevalence of COVID-19.
PART A: MEASURE OF MORBIDITY; Case Scenario
20
C4: During the 1st wave of COVID-19 in 2020, Mubende Municipality with a population 600
people ( all at risk of COVID-19) reported 66 cases of COVID-19, with 65 cases admitted
for case MGT at Mubende Regional referral Hospital (MRRH) and 1 case was referred to
Mulago National Referral Hospital (MNRH) ICU for advanced life saving MGT. If 22 of 110
health workers on COVID -19 case MGT team in MNRH contracted COVID-19 from the
referral case, What was the; a) Primary Attack Rate for COVID-19 in Mubende Municipality
b) Secondary Attack rate of COVID-19 at Mulago NRH.
C5: Following an outbreak of E. coli O157:H7 bloody diarrhea in Kinshasa DRC (2003), an
epidemiologist conducted a case study to establish the link between exposure to certain
foods and E. coli O157:H7 bloody diarrhea. Study results were as shown below:
Ate/Drank Did not eat/Drink
Food Item Sick Total Sick Total P-Value
29
Relationship Between Prevalence (P)
30
& Incidence (I)
Suppose a disease X occurs at an incidence Rate (I) during a
duration (D), then Prevalence (P) of the disease is;
𝑷 = 𝑰 × 𝑫
Case scenario:
1) As per GBD (2021), More than 6 million people world over
are affected by Inflammatory Bowel disease (IBD). If the
incidence rate of IBD is 2.33 (95%CI; 1.4 – 3.4) per 1,000
persons per year in Arab World, determine the expected
prevalence of IBD in 5years time?.
2) Assuming an equal incidence of disease, which of the cancer
following is more prevalent? A) Ca. Pancreas with an average
duration of 3months B) Brain cancer with average duration of
1.5years.
Epidemiologist’s Bathtub
31
Factors affecting Incidence(I) & Prevalence (P)
32
Points to Ponder:
Cure/Recovery Factors ???
Recurrence / Relapse Factors ???
Mortality Factors ???
Ice Burg Phenomenon
33
2) Mortality Ratio
2) Mortality Ratio
𝑀𝑎𝑡𝑒𝑟𝑛𝑎𝑙 𝐷𝑒𝑎𝑡
Maternal Mortality Ratio (MMR) = × 100,000
𝑁𝑜.𝑜𝑓 𝐿𝑖𝑣𝑒 𝐵𝑖𝑟𝑡𝑠
𝑂𝑏𝑠𝑒𝑟𝑣𝑒𝑑 𝐷𝑒𝑎𝑡
Standardized Mortality Ratio (SMR) = × 100
𝐸𝑥𝑝𝑒𝑐𝑡𝑒𝑑 𝐷𝑒𝑎𝑡
Note: If SMR > 1, then Observed Death > Expected Death and
Excess Deaths = (Observed Death – Expected Death)
Case scenario: A study indicates cancer Mortality analysis for all Males in
a give city between1975 – 1985: Determine the SMR & interpret results
Cause of Death Expected Death Observed SMR
Ca. stomach 54.58 72
Genitourinary cancer 168.90 162
Lymphoma 44.57 47
CASE SCENARIO: MEASURE OF MORTALITY
42
46
Top 10 Countries with the Highest Number (1000s) of
Under 5 years Mortality Globally (WHO, 2019)
Bangladesh 90
47
Angola 93
Tanzania 103
Indonesia 115
China 132
Ethiopia 178
DRC 291
Pakistan 399
India 824
Nigeria 858
2) Only Nigeria & India accounted for a third (1/3 ) of all deaths.
Survival Rate; Survival Analysis→ Predict Prognosis
48
49
IMPACT/BURDEN OF DISEASE
50
It Use Descriptive studies (e.g. Descriptive Cross sectional study, clinical/case studies)
& Descriptive statistics including; Frequency (prevalence, incidence) , Measures of
central tendencies, and measures of dispersion to describe distribution of disease &
HRCs in terms of Person, Place & Time.
Disease & HRCs are described in terms of;
Demographic distribution using (Tools): descriptive statistics, tabulation, Graphs &
pictorials/ info graphics.
Spatial distribution using (Tools): Spatial mapping, spatial analysis, remote sensing &
geospatial technology/referencing with GIS & GPS.
Temporal distribution using(Tools): Disease-Time plots/curves & Temporal analysis
(Bubble plots, disease timelines, moving point averages, exponential smoothening, ...).
Determinants of Disease & HRCs
54
Epidemiological Triad
Models of Disease Causation
58
Ecological Model
Ecological Model, Cont.
59
Models of Disease Causation
60
61
Models of Disease Causation
62
Direct Causation
Indirect Causation
Direct Causation
66
2) Multi-Factorial Causation
2.1. Independently 2.2. Cumulatively/ concertedly
Indirect Causation
67
Examples:
1) Unprotected Sex → HIV → HIV/AIDs
2) Malaria → Severe Anemia → Heart Failure
4) Poor Diet → HTN → Heart Disease
5) Obesity/ Hyperlipidemia → Atherosclerosis → CHD
6) Others
Causal Relationships
68
Odds Ratio
𝑂𝑑𝑑𝑠 𝑖𝑛 𝑒𝑥𝑝𝑜𝑠𝑒𝑑
OR =
𝑂𝑑𝑑𝑠 𝑖𝑛 𝑢𝑛𝑒𝑥𝑝𝑜𝑠𝑒𝑑
Consider, a retrospective study that enrolled (a+c) cases and (b+d)
identical controls. The cases & controls were assessed for history of
exposure, and results summarized in a 2X2 contingency table below:
Exposure Outcome (i.e. Disease) Total
Diseased (Cases ) Non-diseased (Control)
Exposed a b (a+b)
Unexposed c d (c+d)
Total (a+c) (b+d)
1 1 1 1
𝑎/𝑏 𝑎𝑑 [±1.96 (𝑎+𝑏+𝑐 +𝑑)]
From tab; OR = = with a 95% CI = 𝑂𝑅 × 𝑒
𝑐/𝑑 𝑏𝑐
Odds Ratio (OR)
77
Interpretation of OR:
OR > 1: Increased Odds of disease with Exposure/Positive Association
OR = 1: No Association Btn Exposure & disease
OR < 1: Decreased Odds of disease with Exposure/ Negative Association
OR is Determined/Measured in Analytical study designs below
Study design Numerator Denominator
Cross sectional Odds of outcome in Exposed Odds of outcome in unexposed
Case – control Odds of exposure in Cases Odds of exposure in Non-cases
Cohort Odds of outcome in Exposed Odds of outcome in unexposed
Case Scenario: Interpret findings of study on HTN associated Factors:
Variable Category OR 95% confidence Interval P-value
Sex Male 3.12 1.04 7.45 0.02
Female 1.0 Ref. Ref.
Odds Ratio (OR)
78
𝑎/(𝑎+𝑏)
From tab; RR =
𝑐/(𝑐+𝑑)
Relative Risk (RR)
80
Interpretation of RR:
RR > 1: Increased Risk of disease with Exposure/Positive Association
RR = 1: No Association Btn Exposure & disease
RR < 1: Decreased Risk of disease with Exposure/ Negative Association
RR is Determined/Measured in Analytical study designs below
Study design Numerator Denominator
Prospective Cohort Incidence of outcome in Exposed Incidence of outcome in unexposed
Attributable Risk
AR =[ Incidence Risk in Exposed – Incidence Risk in unexposed]
AR = I (exposed) – I (unexposed)
Risk Difference (RD) estimate the excess risk of disease caused by/
attributable to a risk factor among the exposed group.
Thus, AR or RD measure of the potential for prevention of disease if
exposure to the risk factor could be eliminated i.e. Guide Health policy
& decision on disease prevention
Determine,
a) % Risk difference of backache in standing female workers at KIU
b) Proportion of risk of backache in KIU female workers
c) From the above findings, make an occupation health policy statement
to guide working conditions of female workers at KIU.
Measures of Effect of Clinical Intervention in Clinical
Experimental/Interventional Studies
88
RCT case M: A study recruited 1000 patients to test the effect of a new drug on
treatment of TB at Mbarara regional referral hospital. A half of the patients
were allocated to receive the drug on a daily basis and the other ones did not.
The patients were followed over a period of six months?
(a) What type of study is this?
(b) How were the patients allocated to the two groups?
(c) How do we call the group that:
(i) Received the new drug ………………...
(ii) Did not receive the new drug …………
(d) What can we possibly give the group that did not receive the drug?
(e) At the end of the six months, 450 and 200 patients in the new drug group
and the no new drug group respectively had recovered from TB. Determine the
(i) Absolute Risk Reduction (ARR) and Number Needed to Treat (NNT),
(ii) Risk Ratio (RR) and Relative Risk Reduction (RRR) comparing recovery among
the two groups. Comment on your results.
Measure of Effect in Randomized Control Trial (RCT)
90
RCT case N: (a) In a randomized control Trial (RCT) comparing two surgical
techniques, 200 surgical candidates were enrolled and 100 patients were
randomly assigned to each group of the two surgical groups. Ten (10) patients
in the first surgical group experienced post-operative complications while 15
cases of post-operative complications were reported in the second
group/counterparts. Determine the;
(i) Relative Risk (RR) or Hazard Ratio (HR) or Risk Ratio (RR)
(ii) Absolute Risk increase (ARI) or Risk Difference (RD) & Number Needed to
Harm (NNH). Comment on your Results
(iii) Relative Risk Reduction (RRR) for the second surgical technique compared to
the first one. Comment on your Results
(b) Describe a well designed Randomized control trial to assess the New
vaccine’s Efficacy in comparison to the Existing one. Describe the key components
of your study design, including Study population-Selection & sampling,
Randomization, allocation of intervention & control, Blinding, Outcome measures,
and ethical considerations.
Other Measures of Effect/ Association
91
Next:
1) Natural History of Disease & Disease Prevention
2) Disease Screening
4) Epidemiology of Infectious/Communicable and Non-communicable diseases
3) Epidemiological Study Designs
4) Chance/Errors, Bias & Confounding