Ijstd 35 85
Ijstd 35 85
Abstract
In an era of information overload, it is important to know how to obtain the required information and also
to ensure that it is reliable information. Hence, it is essential to understand how to perform a systematic
literature search. This article focuses on reliable literature sources and how to make optimum use of these
in dermatology and venereology.
PUBMED
DOI:
10.4103/0253-7184.142387 Pu b M e d i s c u r r e n t l y t h e m o s t w i d e l y u s e d
among these as it contains over 23 million
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Poojary and Bagadia: Literature Search
Table 2: Field operators used in PubMed search citations for biomedical literature and has
Field Command Example been made available free by National Center
operator for Biotechnology Information (NCBI), U.S.
* Find alternative Syphil* (syphilis, National Library of Medicine. However, the
endings to this word syphilitic, syphilid) availability of free full text articles depends on
TIAB Search for this term in Donovanosis [TIAB] the sources. Use of options such as advanced
title and abstract search, medical subject headings (MeSH) terms,
TI Searches for this term Donovanosis [TI]
f r e e f u l l t ex t , Pu b M e d t u t o r i a l s , a n d s i n g l e
in the title only
citation matcher makes the database extremely
Adj Search for one term PEPadj3seropositive
within X number of (will find PEP within 3 user‑friendly [Figure 1]. It can also be accessed
terms from another words of seropositive) o n t h e g o t h r o u g h m o b i l e s u s i n g “ Pu b M e d
AU Searches for all articles Yesudian[AU] Mobile.” One can also create own account in
by a particular author NCBI to save searches and to use certain PubMed
JOUR Searches for articles in Indian J Dermatol [JOUR] tools.
a particular journal
PEP=Postexposure prophylaxis; TIAB=Title abstract; TI=Title;
Adj=Adjacent; AU=Author; JOUR=Journal
Tips for efficient use of PubMed search:[2‑4]
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Poojary and Bagadia: Literature Search
Figure 1: PubMed home page showing location of different tools which can be used for an efficient literature search
Figure 2: PubMed search results page showing articles on donovanosis using the field operator [TIAB]; it shows all articles which have the keyword
“donovanosis” in either title or abstract of the article
Use of medical subject headings terms be about an entirely different topic, but still may
These are very specific and standardized terms used contain your keywords in another context in any
by indexers to describe every article in PubMed part of the article). This will make your search more
and are added to the record of every article. specific. Within the topic, specific subheadings
A search using MeSH will show all articles about can be added to the search builder to refine your
the topic (or keywords), but will not show articles search [Figure 4]. For example, MeSH terms for
only containing these keywords (these articles may treatment are therapy and therapeutics.
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Poojary and Bagadia: Literature Search
Figure 3: PubMed search using Boolean operators ‘AND’, ‘NOT’; To search for articles on treatment of lepra reaction other than steroids, after clicking
the option ‘Advanced search’ on the home page, one can build the search using ‘AND’ option for treatment and ‘NOT’ option for steroids to omit
articles on steroid treatment in lepra reaction
Figure 4: PubMed search using medical subject headings (MeSH) terms for management of gonorrhea. Click on MeSH database (Figure 1) →In the
MeSH search box type gonorrhea and click search. Under the MeSH term gonorrhea, there will be a list of subheadings; therapy, prevention and
control, click the relevant check boxes and add to search builder →Click on search →All articles on therapy, prevention and control of gonorrhea will
be displayed. Below the subheadings, there are two options: (1) Restrict to medical subject headings (MeSH) major topic and (2) do not include MeSH
terms found below this term in the MeSH hierarchy. These can be used to further refine the search results so that only articles which are majorly about
treatment of gonorrhea will be displayed
Two additional options can be used to further This option will again give you more focused articles
refine MeSH searches. These are located below the as it excludes the lower specific terms [Figure 4].
subheadings for a MeSH term: (1) Restrict to MeSH
major topic; checking this box will retrieve articles Similar feature is available with Cochrane
which are majorly about the search term and are library (also called MeSH), EMBASE (known as
therefore, more focused and (2) Do not include MeSH EMTREE) and PsycINFO (Thesaurus of Psychological
terms found below this term in the MeSH hierarchy. Index Terms).
88 Indian Journal of Sexually Transmitted Diseases and AIDS 2014; Vol. 35, No. 2
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Figure 5: Saving PubMed searches. A simple option is to click on the dropdown box next to ‘Send to’ option and then choose among the options. It can
be saved as a text or word file by choosing ‘File’ option. Another option is the “Save search” option below the search box but this will require logging
into your National Center for Biotechnology Information account. This however allows you to set up alerts for E-mail updates for new articles
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control group or studies with only randomized Selecting the right quality of literature is the
control trials). key to successful research literature review. The
Figure 6: Single citation matcher: Click on “Single citation matcher” on PubMed Home page. Type available details of the required reference in the
boxes to get the required citation
Figure 7: Managing filters. Simple filters are available on the ‘search results’ page. One can choose type of article, e.g., clinical trial, reviews etc.
Further options are available in the “Manage filters” option, but this requires logging into National Center for Biotechnology Information account
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Figure 8: Cochrane library is a useful resource for reliable, systematic reviews. One can choose the type of reviews required, including trials
Figure 9: Evidence pyramid: Depicting the level of evidence of references obtained from the aforementioned search tools
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