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From Wikipedia, the free encyclopedia
This article is about the branch of biology. For cells themselves, see Cell (biology).
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Cell biology (also cellular biology or cytology) is a branch of biology that studies
the structure, function, and behavior of cells.[1][2] All living organisms are made of
cells. A cell is the basic unit of life that is responsible for the living and functioning of
organisms.[3] Cell biology is the study of the structural and functional units of cells.
Cell biology encompasses both prokaryotic and eukaryotic cells and has many
subtopics which may include the study of cell metabolism, cell communication, cell
cycle, biochemistry, and cell composition. The study of cells is performed using
several microscopy techniques, cell culture, and cell fractionation. These have
allowed for and are currently being used for discoveries and research pertaining to
how cells function, ultimately giving insight into understanding larger organisms.
Knowing the components of cells and how cells work is fundamental to all biological
sciences while also being essential for research in biomedical fields such as cancer,
and other diseases. Research in cell biology is interconnected to other fields such
as genetics, molecular genetics, molecular biology, medical
microbiology, immunology, and cytochemistry.
History[edit]
Cells were first seen in 17th-century Europe with the invention of the compound
microscope. In 1665, Robert Hooke referred to the building blocks of all living
organisms as "cells" (published in Micrographia) after looking at a piece of cork and
observing a cell-like structure;[4][5] however, the cells were dead. They gave no
indication to the actual overall components of a cell. A few years later, in
1674, Anton Van Leeuwenhoek was the first to analyze live cells in his examination
of algae. Many years later, in 1831, Robert Brown discovered the nucleus. All of this
preceded the cell theory which states that all living things are made up of cells and
that cells are organisms' functional and structural units. This was ultimately
concluded by plant scientist Matthias Schleiden[5] and animal scientist Theodor
Schwann in 1838, who viewed live cells in plant and animal tissue, respectively.[3] 19
years later, Rudolf Virchow further contributed to the cell theory, adding that all cells
come from the division of pre-existing cells.[3] Viruses are not considered in cell
biology – they lack the characteristics of a living cell and instead are studied in
the microbiology subclass of virology.[6]
Techniques[edit]
Cell biology research looks at different ways to culture and manipulate cells outside
of a living body to further research in human anatomy and physiology, and to derive
medications.The techniques by which cells are studied have evolved. Due to
advancements in microscopy, techniques and technology have allowed scientists to
hold a better understanding of the structure and function of cells. Many techniques
commonly used to study cell biology are listed below:[7]
Cell culture: Utilizes rapidly growing cells on media which allows for a
large amount of a specific cell type and an efficient way to study cells.
[8]
Cell culture is one of the major tools used in cellular and molecular
biology, providing excellent model systems for studying the normal
physiology and biochemistry of cells (e.g., metabolic studies, aging), the
effects of drugs and toxic compounds on the cells, and mutagenesis and
carcinogenesis. It is also used in drug screening and development, and
large scale manufacturing of biological compounds (e.g., vaccines,
therapeutic proteins).
Fluorescence microscopy: Fluorescent markers such as GFP, are used to
label a specific component of the cell. Afterwards, a certain light
wavelength is used to excite the fluorescent marker which can then be
visualized.[8]
Phase-contrast microscopy: Uses the optical aspect of light to represent
the solid, liquid, and gas-phase changes as brightness differences.[8]
Confocal microscopy: Combines fluorescence microscopy with imaging by
focusing light and snap shooting instances to form a 3-D image.[8]
Transmission electron microscopy: Involves metal staining and the
passing of electrons through the cells, which will be deflected upon
interaction with metal. This ultimately forms an image of the components
being studied.[8]
Cytometry: The cells are placed in the machine which uses a beam to
scatter the cells based on different aspects and can therefore separate
them based on size and content. Cells may also be tagged with GFP-
fluorescence and can be separated that way as well.[9]
Cell fractionation: This process requires breaking up the cell using high
temperature or sonification followed by centrifugation to separate the parts
of the cell allowing for them to be studied separately.[8]
Cell types[edit]
Main article: Cell types
They both reproduce through binary fission. Bacteria, the most prominent type, have
several different shapes, although most are spherical or rod-shaped. Bacteria can be
classed as either gram-positive or gram-negative depending on the cell
wall composition. Gram-positive bacteria have a thicker peptidoglycan layer than
gram-negative bacteria. Bacterial structural features include a flagellum that helps
the cell to move,[13] ribosomes for the translation of RNA to protein,[13] and
a nucleoid that holds all the genetic material in a circular structure.[13] There are many
processes that occur in prokaryotic cells that allow them to survive. In
prokaryotes, mRNA synthesis is initiated at a promoter sequence on the DNA
template comprising two consensus sequences that recruit RNA polymerase. The
prokaryotic polymerase consists of a core enzyme of four protein subunits and a σ
protein that assists only with initiation. For instance, in a process termed conjugation,
the fertility factor allows the bacteria to possess a pilus which allows it to transmit
DNA to another bacteria which lacks the F factor, permitting the transmittance of
resistance allowing it to survive in certain environments.[14]
Nucleus: The nucleus of the cell functions as the genome and genetic
information storage for the cell, containing all the DNA organized in the
form of chromosomes. It is surrounded by a nuclear envelope, which
includes nuclear pores allowing for the transportation of proteins between
the inside and outside of the nucleus.[15] This is also the site for replication
of DNA as well as transcription of DNA to RNA. Afterwards, the RNA is
modified and transported out to the cytosol to be translated to protein.[16]
Nucleolus: This structure is within the nucleus, usually dense and
spherical. It is the site of ribosomal RNA (rRNA) synthesis, which is
needed for ribosomal assembly.
Endoplasmic reticulum (ER): This functions to synthesize, store, and
secrete proteins to the Golgi apparatus.[17] Structurally, the endoplasmic
reticulum is a network of membranes found throughout the cell and
connected to the nucleus. The membranes are slightly different from cell
to cell and a cell's function determines the size and structure of the ER. [18]
Mitochondria: Commonly known as the powerhouse of the cell is a double
membrane bound cell organelle.[19] This functions for the production of
energy or ATP within the cell. Specifically, this is the place where the
Krebs cycle or TCA cycle for the production of NADH and FADH occurs.
Afterwards, these products are used within the electron transport chain
(ETC) and oxidative phosphorylation for the final production of ATP.[20]
Golgi apparatus: This functions to further process, package, and secrete
the proteins to their destination. The proteins contain a signal sequence
that allows the Golgi apparatus to recognize and direct it to the correct
place. Golgi apparatus also produce glycoproteins and glycolipids.[21]
Lysosome: The lysosome functions to degrade material brought in from
the outside of the cell or old organelles. This contains many acid
hydrolases, proteases, nucleases, and lipases, which break down the
various molecules. Autophagy is the process of degradation through
lysosomes which occurs when a vesicle buds off from the ER and engulfs
the material, then, attaches and fuses with the lysosome to allow the
material to be degraded.[22]
Ribosomes: Functions to translate RNA to protein. it serves as a site of
protein synthesis.[23]
Cytoskeleton: Cytoskeleton is a structure that helps to maintain the shape
and general organization of the cytoplasm. It anchors organelles within the
cells and makes up the structure and stability of the cell. The cytoskeleton
is composed of three principal types of protein filaments: actin filaments,
intermediate filaments, and microtubules, which are held together and
linked to subcellular organelles and the plasma membrane by a variety of
accessory proteins.[24]
Cell membrane: The cell membrane can be described as a phospholipid
bilayer and is also consisted of lipids and proteins.[13] Because the inside of
the bilayer is hydrophobic and in order for molecules to participate in
reactions within the cell, they need to be able to cross this membrane
layer to get into the cell via osmotic pressure, diffusion, concentration
gradients, and membrane channels.[25]
Centrioles: Function to produce spindle fibers which are used to separate
chromosomes during cell division.
Eukaryotic cells may also be composed of the following molecular components:
Cell signaling[edit]
Further information: Cell signaling
Cell signaling or cell communication is important for cell regulation and for cells to
process information from the environment and respond accordingly. Signaling can
occur through direct cell contact or endocrine, paracrine, and autocrine signaling.
Direct cell-cell contact is when a receptor on a cell binds a molecule that is attached
to the membrane of another cell. Endocrine signaling occurs through molecules
secreted into the bloodstream. Paracrine signaling uses molecules diffusing between
two cells to communicate. Autocrine is a cell sending a signal to itself by secreting a
molecule that binds to a receptor on its surface. Forms of communication can be
through:
Ion channels: Can be of different types such as voltage or ligand gated ion
channels. They allow for the outflow and inflow of molecules and ions.
G-protein coupled receptor (GPCR): Is widely recognized to contain seven
transmembrane domains. The ligand binds on the extracellular domain
and once the ligand binds, this signals a guanine exchange factor to
convert GDP to GTP and activate the G-α subunit. G-α can target other
proteins such as adenyl cyclase or phospholipase C, which ultimately
produce secondary messengers such as cAMP, Ip3, DAG, and calcium.
These secondary messengers function to amplify signals and can target
ion channels or other enzymes. One example for amplification of a signal
is cAMP binding to and activating PKA by removing the regulatory
subunits and releasing the catalytic subunit. The catalytic subunit has a
nuclear localization sequence which prompts it to go into the nucleus and
phosphorylate other proteins to either repress or activate gene activity.[27]
Receptor tyrosine kinases: Bind growth factors, further promoting the
tyrosine on the intracellular portion of the protein to cross phosphorylate.
The phosphorylated tyrosine becomes a landing pad for proteins
containing an SH2 domain allowing for the activation of Ras and the
involvement of the MAP kinase pathway.[28]
Growth and development[edit]
Eukaryotic cell cycle[edit]
Main article: Cell cycle
The cell cycle is divided into four distinct phases: G1, S, G2, and M. The G phase –
which is the cell growth phase – makes up approximately 95% of the cycle. The
proliferation of cells is instigated by progenitors. All cells start out in an identical form
and can essentially become any type of cells. Cell signaling such as induction can
influence nearby cells to determinate the type of cell it will become. Moreover, this
allows cells of the same type to aggregate and form tissues, then organs, and
ultimately systems. The G1, G2, and S phase (DNA replication, damage and repair)
are considered to be the interphase portion of the cycle, while the M phase (mitosis)
is the cell division portion of the cycle. Mitosis is composed of many stages which
include, prophase, metaphase, anaphase, telophase, and cytokinesis, respectively.
The ultimate result of mitosis is the formation of two identical daughter cells.
The cell cycle is regulated in cell cycle checkpoints, by a series of signaling factors
and complexes such as cyclins, cyclin-dependent kinase, and p53. When the cell
has completed its growth process and if it is found to be damaged or altered, it
undergoes cell death, either by apoptosis or necrosis, to eliminate the threat it can
cause to the organism's survival.[29]
The interphase refers to the phases of the cell cycle that occur between one mitosis
and the next, and includes G1, S, and G2.
G1 phase[edit]
The size of the cell grows.
The contents of cells are replicated.
S phase[edit]
Replication of DNA
G2 phase[edit]
The cell multiplies.
M phase[edit]
After mitosis, cytokinesis occurs (cell separation)
G0 phase[edit]
These cells leave G1 and enter G0, a resting stage. A cell in G0 is doing its job
without actively preparing to divide.[32]
Pathology[edit]
Main article: Cytopathology
The scientific branch that studies and diagnoses diseases on the cellular level is
called cytopathology. Cytopathology is generally used on samples of free cells or
tissue fragments, in contrast to the pathology branch of histopathology, which
studies whole tissues. Cytopathology is commonly used to investigate diseases
involving a wide range of body sites, often to aid in the diagnosis of cancer but also
in the diagnosis of some infectious diseases and other inflammatory conditions. For
example, a common application of cytopathology is the Pap smear, a screening
test used to detect cervical cancer, and precancerous cervical lesions that may lead
to cervical cancer.[33]
The cell cycle is a sequence of activities in which cell organelles are duplicated and
subsequently separated into daughter cells with precision. There are major events
that happen during a cell cycle. The processes that happen in the cell cycle include
cell development, replication and segregation of chromosomes. The cell cycle
checkpoints are surveillance systems that keep track of the cell cycle's integrity,
accuracy, and chronology. Each checkpoint serves as an alternative cell cycle
endpoint, wherein the cell's parameters are examined and only when desirable
characteristics are fulfilled does the cell cycle advance through the distinct steps.
The cell cycle's goal is to precisely copy each organism's DNA and afterwards
equally split the cell and its components between the two new cells. Four main
stages occur in the eukaryotes. In G1, the cell is usually active and continues to
grow rapidly, while in G2, the cell growth continues while protein molecules become
ready for separation. These are not dormant times; they are when cells gain mass,
integrate growth factor receptors, establish a replicated genome, and prepare for
chromosome segregation. DNA replication is restricted to a separate Synthesis in
eukaryotes, which is also known as the S-phase. During mitosis, which is also known
as the M-phase, the segregation of the chromosomes occur.[36] DNA, like every other
molecule, is capable of undergoing a wide range of chemical reactions. Modifications
in DNA's sequence, on the other hand, have a considerably bigger impact than
modifications in other cellular constituents like RNAs or proteins because DNA acts
as a permanent copy of the cell genome. When erroneous nucleotides are
incorporated during DNA replication, mutations can occur. The majority of DNA
damage is fixed by removing the defective bases and then re-synthesizing the
excised area. On the other hand, some DNA lesions can be mended by reversing
the damage, which may be a more effective method of coping with common types of
DNA damage. Only a few forms of DNA damage are mended in this fashion,
including pyrimidine dimers caused by ultraviolet (UV) light changed by the insertion
of methyl or ethyl groups at the purine ring's O6 position.[37]
Autophagy[edit]
Main article: Autophagy
Autophagy is a self-degradative mechanism that regulates energy sources during
growth and reaction to dietary stress. Autophagy also cleans up after itself, clearing
aggregated proteins, cleaning damaged structures including mitochondria and
endoplasmic reticulum and eradicating intracellular infections. Additionally,
autophagy has antiviral and antibacterial roles within the cell, and it is involved at the
beginning of distinctive and adaptive immune responses to viral and bacterial
contamination. Some viruses include virulence proteins that prevent autophagy,
while others utilize autophagy elements for intracellular development or cellular
splitting.[38] Macro autophagy, micro autophagy, and chaperon-mediated autophagy
are the three basic types of autophagy. When macro autophagy is triggered, an
exclusion membrane incorporates a section of the cytoplasm, generating the
autophagosome, a distinctive double-membraned organelle. The autophagosome
then joins the lysosome to create an autolysosome, with lysosomal enzymes
degrading the components. In micro autophagy, the lysosome or vacuole engulfs a
piece of the cytoplasm by invaginating or protruding the lysosomal membrane to
enclose the cytosol or organelles. The chaperone-mediated autophagy (CMA)
protein quality assurance by digesting oxidized and altered proteins under stressful
circumstances and supplying amino acids through protein denaturation.[39] Autophagy
is the primary intrinsic degradative system for peptides, fats, carbohydrates, and
other cellular structures. In both physiologic and stressful situations, this cellular
progression is vital for upholding the correct cellular balance. Autophagy instability
leads to a variety of illness symptoms, including inflammation, biochemical
disturbances, aging, and neurodegenerative, due to its involvement in controlling cell
integrity. The modification of the autophagy-lysosomal networks is a typical hallmark
of many neurological and muscular illnesses. As a result, autophagy has been
identified as a potential strategy for the prevention and treatment of various
disorders. Many of these disorders are prevented or improved by consuming
polyphenol in the meal. As a result, natural compounds with the ability to modify the
autophagy mechanism are seen as a potential therapeutic option.[40] The creation of
the double membrane (phagophore), which would be known as nucleation, is the first
step in macro-autophagy. The phagophore approach indicates dysregulated
polypeptides or defective organelles that come from the cell membrane, Golgi
apparatus, endoplasmic reticulum, and mitochondria. With the conclusion of the
autophagocyte, the phagophore's enlargement comes to an end. The auto-
phagosome combines with the lysosomal vesicles to formulate an auto-lysosome
that degrades the encapsulated substances, referred to as phagocytosis.[41]
Czech anatomist Jan Evangelista Purkyně is best known for his 1837 discovery
of Purkinje cells.
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References[edit]
Penner-Hahn, James E. (2013). "Chapter 2. Technologies for Detecting
Metals in Single Cells. Section 4. Intrinsic X-Ray Fluorescence". In Bani,
Lucia (ed.). Metallomics and the Cell. Metal Ions in Life Sciences. Vol. 12.
Springer. pp. 15–40. doi:10.1007/978-94-007-5561-1_2. ISBN 978-94-
007-5560-4. PMID 23595669.electronic-book ISBN 978-94-007-5561-1 IS
SN 1559-0836electronic-ISSN 1868-0402
Cell and Molecular Biology by Karp 5th Ed., ISBN 0-471-46580-1
This article incorporates public domain material from Science
Primer. NCBI. Archived from the original on 8 December 2009.
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