Vaccine Development
Vaccine Development
Vaccine development
Authors: Geert Leroux-Roels, Paolo Bonanni,
Terapong Tantawichien, Fred Zepp
Key concepts
n Vaccine development is a complex multistep process
n From concept to licensure, it takes many years to develop a vaccine
n Following authorisation to market, it may be necessary to provide evidence of economic value prior to governments
approving the implementation of a new vaccination programme
n Safety is a major issue for any vaccine; it is assessed at every step of vaccine development and safety
surveillance continues indefinitely after licensure
n Sometimes an adverse reaction is observed after a vaccination. It is important to determine whether a temporal
association between the adverse event and the vaccination is causal, rather than a random chance occurrence
(coincidental). Otherwise, vaccination programmes are halted for risks that are only theoretical, thus
endangering people’s health through not being vaccinated
n Clinical and epidemiological studies indicate that licensed vaccines have a benefiterisk profile where the
benefits of vaccines clearly outweigh the risks of adverse effects
doi:10.1016/j.pervac.2011.05.005
116 UNDERSTANDING MODERN VACCINES
Overview
Vaccine development is a complex and lengthy process that
has evolved and expanded especially over the last few decades.
Early on, the focus of the vaccine development process was the
immunogenicity and efficacy of the vaccines, which were
generally developed for diseases with significant burdens of
morbidity; often with high mortality as well. As once-prevalent
deadly diseases have become uncommon, or even eliminated,
the focus of vaccine development has shifted to place even
greater emphasis on benefiterisk profiles, with increased
attention paid to the safety of vaccines. Moreover, the general
public has become increasingly sensitive to potential safety
issues of vaccines, as it no longer fears the diseases for which
the vaccines were developed. As a consequence, the need to
demonstrate vaccine safety requires more investigations today
than was necessary in the past. This need is reflected in more
comprehensive regulatory and licensing procedures aiming to
ensure that a new vaccine has a benefiterisk profile where the
benefits are many times greater than the risks.
Economic considerations also play an increasing role in vaccine
implementation. The older vaccines could be introduced to market
primarily based upon mortality reduction arguments; however,
nowadays there is a shift towards economic argumentation where
the implementation of a new vaccine depends upon the perceived
value of the programme outweighing the cost.
It was the introduction of the first conjugate pneumococcal vaccine
that heralded economic evaluation of vaccines. Interestingly, this
vaccine was initially determined not to be cost-effective; however
this was challenged when the indirect benefits (herd protection
effects) of vaccination were included. While more complex vaccines
are developed, calculation of the overall investment/return ratio
is important for governments and healthcare providers, as they
evaluate the desirability of introducing a particular vaccine. This
chapter gives an overview of the key considerations and processes
involved in vaccine development, licensure and implementation,
VACCINE DEVELOPMENT 117
and will highlight where experience has led to changes that have
improved development processes.
PRECLINICAL EVALUATION
Overview
Before investigational vaccines enter clinical trials, it is important to
identify the lead vaccine candidates through relevant in vitro studies
and in vivo animal models. Many candidate vaccines will not
progress beyond this stage due to unacceptable reactogenicity in
animal models or a lack of immunogenicity.
To satisfy regulatory requirements, candidate vaccines must be
assessed in a number of ways including, but not limited to, analysis
VACCINE DEVELOPMENT 121
Figure 5.1 The multifactorial vaccine development process. The vaccine development process can be lengthy and involves many steps and
regulatory checks. Each of these steps can be broadly categorised into three stages: preclinical, clinical and post-licensure development.
These milestones are built into the process to ensure the safety and immunogenicity/efficacy of the final licensed product.
Ag, antigen; GMP, good manufacturing practice; IND, investigational new drug; GLP, good laboratory practice.
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CLINICAL EVALUATION
Overview
Clinical development involves studies of the effects of vaccines on
healthy volunteers for safety, immunogenicity and efficacy through
a staged process. As shown in Figure 5.1, there are three distinct
phases in the clinical development programme following preclinical
acceptance of a vaccine candidate. Phase I clinical studies are
mainly safety studies, with some of them looking at dose-ranging as
well. Phase II trials include immunogenicity proof-of-concept (and in
some cases, efficacy) and dose-ranging, and carry the vaccine
forward in increasing numbers of volunteers. Larger Phase III clinical
trials are then conducted to determine the ability of a new vaccine to
produce a desired clinical effect at an optimum dose and schedule
with an acceptable safety profile. These are conducted and
completed alongside consistency lot studies (for consistency of
vaccine physicochemical and biological quality and effect among
different vaccine lots). In addition, post-licensure trials, also known
as Phase IV trials, include studies on new indications of use and
safety surveillance studies (pharmacovigilance). Phase IV
surveillance studies, because of the large sample size involved, are
designed to detect very rare adverse events (AEs) that are difficult
to pick up in Phase III studies. Due to the prophylactic nature of
most vaccines and since licensed vaccines are generally given to
large populations of healthy people including infants and children,
in addition to showing considerable benefits, the risks associated
with vaccination have to be minimal in order to maximise
acceptance, thereby achieving expected public health benefits.
This may differ from therapeutic vaccines or drugs, where the
potential improvement of an existing clinical condition may increase
a patient’s tolerance or acceptance of certain AEs.
The success of clinical studies is based on precise and relevant
immunological and clinical endpoints (these are essential if the
immune correlates of protection are not known); accurate estimates
of sample size based on disease incidence; appropriate numbers
of subjects (to allow for the estimated drop-out rate); and rigorous
124 UNDERSTANDING MODERN VACCINES
Figure 5.2 Vaccine safety is important at all stages of development. Safety is assessed at all points of the vaccine development process e from
preclinical toxicology studies using cell cultures and animal models through to rigorous assessment in clinical studies. Post-licensure, safety is still
of prime concern and is the major focus of post-licensure surveillance studies.
AEs, adverse events.
VACCINE DEVELOPMENT 125
an acceptable safety profile. The reporting rate of SAEs and, in particular, of AI diseases in the
group receiving the adjuvanted vaccines, was very similar to the control group and the relative
risk was very close to 1 (0.98 [95% confidence intervals 0.80, 1.21]) (a relative risk, or risk ratio,
of 1 means there is no difference in risk between the two groups).
As with all vaccines, an extensive post-licensure surveillance system is also in place and has
so far confirmed the acceptable benefiterisk profile of the vaccine.
Highlights
New-generation vaccines containing novel adjuvants are subject to increased safety testing
throughout the vaccine development process. The safety assessment has been enhanced
with additional preclinical mode of action studies and active soliciting of SAEs, in particular of
AI diseases. All safety assessments performed have the objective of increasing the likelihood
of identifying possible safety concerns and consequently of taking the necessary measures to
remove or minimise them.
Vaccine production
The selection and production of different types of vaccine antigens
are discussed in more detail in Chapter 3 e Vaccine antigens. Here,
the principles of the production of each type of antigen are briefly
described. Vaccine manufacturing processes can be split into bulk
manufacturing and finishing operations (Figure 5.3). For bulk
manufacturing, the first step is the propagation of vaccine-strain
viruses, bacteria or other microorganisms in culture. The starting
point for bacterial vaccines may be the growth of the organism on
agar gels which can then be expanded in large-scale liquid/
suspension culture. Vaccine-strain viruses are expanded by culture
VACCINE DEVELOPMENT 127
VACCINE APPROVAL
There are three principal licensing procedures for vaccines in
the European Union (EU): the centralised procedure, the
mutual recognition procedure and the decentralised procedure
(Figure 5.4). These review procedures are expected to be
completed within 210 days after receipt of a valid application.
Figure 5.4 Licensing procedures for vaccines in the EU. There are three separate vaccine licensing procedures in the EU. The processes
involved in acquiring a licence vary depending on whether a licence covering several countries or an EU-wide licence is applied for.
EU, European Union.
VACCINE DEVELOPMENT 131
Figure 5.5 EU authorisation of pandemic influenza vaccines using the ‘mock-up procedure’. A mock-up vaccine is a type of influenza vaccine
that is developed before a pandemic has started using a strain of influenza virus that is a possible candidate to start a pandemic, since it has
infected small clusters of subjects and to which the majority of the population does not have pre-existing immunity. Data on safety,
immunogenicity and manufacturing quality can be generated using a mock-up vaccine. The mock-up vaccine strain is then replaced with
the pandemic strain once a pandemic is declared. New data generated from the final vaccine are submitted on a rolling review basis.
EU, European Union; CHMP Committee for Medicinal Products for Human Use; EC, European Commission.
134 UNDERSTANDING MODERN VACCINES
Figure 5.6 EU authorisation of pandemic influenza vaccines using the ‘emergency procedure’. In addition to the mock-up procedure, the EMA
has also set up the ‘emergency procedure’ that allows for fast-track approval of a new vaccine developed after a pandemic has already been
declared. In contrast to the mock-up procedure, the authorisation of vaccines submitted via the emergency procedure requires submission of
a new, full dossier of information that may take more time compared with working from a mock-up dossier.
EU, European Union; EMA, European Medicines Agency; CHMP Committee for Medicinal Products for Human Use; EC, European Commission.
VACCINE DEVELOPMENT 135
vaccines, while maintaining quality and safety standards. The H1N1 DaronrixÔ GSK Biologicals
pandemic influenza case study provides a good example of how FocetriaÔ Novartis
the clinical and safety profiles of pandemic vaccines have been HumenzaÔ Sanofi Pasteur
continuously monitored and assessed. PandemrixÔ GSK Biologicals
136 UNDERSTANDING MODERN VACCINES
TABLE 5.2. ADVERSE EVENTS OF SPECIAL INTEREST e RARE CONDITIONS TO MONITOR IN POST-AUTHORISATION
STUDIES OF PANDEMIC INFLUENZA VACCINES
l Convulsions (generalised seizures)
l Bell’s palsy
l Encephalitis
l Transverse myelitis
l GuillaineBarré syndrome
l Demyelination (acute disseminated encephalomyelitis and multiple sclerosis, separately)
l Optic neuritis
l Vasculitis (severe)
l Anaphylaxis (multi-organ involvement)
l Thrombocytopenia
l Sudden death and sudden infant death syndrome/sudden unexpected death in infancy
l Spontaneous abortion and premature birth
This table refers to the adverse events of special interest requested by the EMA. It is not specific to any particular pandemic vaccine.
EMA, European Medicines Agency.
Figure 5.7 Vaccine pharmacovigilance. Considerations for vaccine pharmacovigilance include acquiring an understanding of
baseline events, continuously assessing benefits and risks, and the collection and reporting of AEs within the times stipulated by
regulatory authorities.
AEs, adverse events; SAEs, serious adverse events.
VACCINE DEVELOPMENT 139
CASE STUDY 2 Vaccines for a pandemic situation undergo fast-track approval but still
follow stringent regulation processes to ensure safety and immunogenicity
Background
At the beginning of summer 2009, the WHO declared a pandemic alert due to an outbreak of
a swine-origin influenza A virus (H1N1). As of August 2010, more than 214 countries had
reported a total of at least 18,449 deaths.
Safety assessment
In addition to a progressive submission of clinical data and the rolling review by CHMP,
specific active surveillance systems were put in place in the EU, by the EMA and health
authorities, to rigorously assess the safety profile of new pandemic vaccines; the EMA also
issued pandemic influenza vaccine risk management guidance. This guidance was
updated after the appearance of the H1N1 pandemic virus to include monitoring of
immunocompromised people, children and pregnant women as these groups were found to
have a higher risk of severe disease after infection. The EMA also introduced the active
surveillance of AEs of special interest (AESI), including problems affecting the nervous
system, anaphylaxis (severe allergic reactions) and vaccination failure, and intensified the
periodic reporting of SAEs after pandemic influenza vaccines (Table 5.2). The EMA required
the influenza vaccine manufacturers to carry out additional safety studies and to put special
pandemic risk management plans in place once their pandemic vaccines were administered
to the general population. The EMA also required companies to confirm efficacy in preventing
pandemic influenza in all age groups and ‘at risk’ groups after authorisation.
In the USA, the FDA published a briefing document in July 2009 specifically for H1N1 influenza
vaccines, stating that post-marketing evaluation of AEs would be monitored ‘through reports to
the Vaccine Adverse Event Reporting System (VAERS), as well as through diagnoses and
related data in the Vaccine Safety Data (VSD) link system, the Department of Defense (DoD),
Centers for Medicaid and Medicare Services (CMS), the Veterans’ Health Administration (VHA),
and other population-based health care organizations’.
Therefore, pandemic vaccines can be licensed under a fast-track procedure; however, they
must follow comprehensive and stringent safety assessments and immunogenicity/efficacy
requirements to allow a close monitoring of their benefiterisk profile.
The Global Advisory Committee on Vaccine Safety (GACVS), an expert clinical and scientific
advisory body established by the WHO, conducted a safety review from data generated
between September and December 2009 following the administration of tens of millions of
doses of the pandemic (H1N1) 2009 vaccine. The committee concluded that the safety data
were reassuring; reporting mechanisms had been enhanced (see above) and most AEs that
were reported after immunisation were expected and not serious (WHO, 2009).
Highlights
Even vaccines produced in emergency situations are subject to stringent regulations and
procedures to ensure that their immunogenicity, efficacy and safety are thoroughly and
continuously evaluated. The pandemic influenza vaccines’ assessment, which is the most
comprehensive ever done for influenza vaccine has, thus far, confirmed the clinically
acceptable benefiterisk profiles of pandemic influenza vaccines.
CASE STUDY 3 The importance of understanding the background incidence of events that
could be related to vaccination
Background
Rotavirus infection in infants and young children can rapidly lead to severe diarrhoea and
dehydration, electrolyte imbalance and metabolic acidosis. In developing countries, severe
gastroenteritis caused by rotavirus is a leading cause of childhood illness and death. Eighty
two per cent of the annual rotavirus deaths in children occur in low income countries, most
likely due to limited healthcare infrastructure and inadequate domestic sanitation conditions.
Rotavirus causes a substantial disease burden; natural infection with one or several serotypes
of rotavirus does not afford 100% protection against subsequent infection, although it can
mitigate the severity of subsequent attacks. The burden of disease is largely associated with
children below 5 years of age, with a higher rate of severe cases in children below 2 years of
age (mostly in infants). In older children, previous encounters with rotaviruses make
individuals less susceptible to infection and more likely to develop a milder form of disease.
Therefore, a realistic goal for a vaccine candidate would be to provide at least the degree of
protection that follows natural infection at an earlier age, ie to prevent the severe and
life-threatening complications of rotavirus diarrhoeas in infancy.
Previous attempts at rotavirus vaccination
In August 1998, rhesus rotavirus tetravalent vaccine (RRV-TV) (RotashieldÔ) was licensed by
the FDA and recommended for inclusion in the regular childhood immunisation schedule.
The efficacy and safety of this vaccine, which incorporated three reassortant (human/simian)
rotaviruses, was tested in seven large efficacy trials in which approximately 7000 infants
received the vaccine. The data showed efficacy against rotavirus disease and the only
significant safety outcome of note was fever. In the first year following licensure of the
vaccine in the USA however, 15 cases of intussusception (a reversible invagination of
a section of the small intestine into itself) occurred among infants who had received RRV-TV
(13 following the first dose, two within 1 week of any dose). Background estimates of the
Two live oral rotavirus vaccines e RotaTeqÔ (RV5) and RotarixÔ (RV1) e were tested in
two large clinical trials (Ruiz-Palacios et al., 2006; Vesikari et al., 2006), each of which
included over 60,000 infants. Neither vaccine was shown during clinical development to
induce an increased rate of intussusception (ie the incidence of intussusception in those
who received the rotavirus vaccine and those who did not was comparable) or other SAEs.
Since 2006, the two vaccines have been licensed for use in many countries. Their licensure
has been followed by rigorous post-licensure surveillance monitoring including an
enhanced review of AEs reported to VAERS. Intensive post-licensure surveillance is
necessary to assess the safety of this vaccine with regard to intussusception, as
occurrences of this rare event are expected to occur by chance following, but not caused
by, vaccination e in the USA, the VSD is being used for this purpose and to evaluate any
other possible associations. Reports of intussusception after vaccination have been
received for both licensed vaccines. A clustering of 18 hospitalisations was identified
following intussusception (none of which were associated with fatality) in the period 1e7
days after the first dose in Mexico; no clustering was observed after the first dose in Brazil.
This would translate to a risk of approximately 20e40 additional cases per year nationwide
at current vaccination rates (approximately 2 million). Australian post-marketing surveillance
studies found no increased risk of intussusception up to 9 months of age with either
RotarixÔ or RotaTeqÔ vaccines. US data (from a smaller population compared with the
Mexico data) do not show evidence of an increased risk of intussusception with RotaTeqÔ.
If these data are confirmed, the level of risk with the two current vaccines is substantially
lower than the risk of one case of intussusception in 5000e10,000 vaccinees seen with the
withdrawn RRV-TV vaccine (WHO, 2011).
Highlights
Occasionally, unexpected rare vaccine-related events, which were not detected during the
pre-licensure clinical programme due to their low incidence rate, are detected once a vaccine
is approved and administered to large numbers of individuals. Continuous and thorough
collection and evaluation of safety data prior to and post-licensure is paramount to
continuously assess and re-evaluate the benefiterisk profile of vaccines.
Passive immunisation
Prior to the development of HAV vaccines, human plasma immunoglobulin (Ig) from pooled
donor IgG was administered as a pre- or post-exposure prophylactic measure, demonstrating
the protective role of anti-HAV antibodies in humans. The concentrations of antibody
achieved after passive transfer of immunoglobulin (or active induction by vaccination) are 10
e100-fold lower than those produced in response to natural infection, but are sufficient to
protect against overt HAV disease.
Active immunisation
Experience regarding passive immunisation with Ig showed that individuals were protected
with anti-HAV concentrations of 10e20 mIU/mL. However, since no absolute protective level
has been defined for HAV, generally the lower limit of detection of the assay being used has
been considered as the protective level. With this serological correlate of protection,
candidate vaccines against HAV were rapidly developed and licensed; subsequently their
efficacy has been confirmed in a number of studies and immunisation campaigns.
Highlights
Immune correlates of protection, when validated by a demonstrated clinical benefit, are
extremely useful to the development of efficacious vaccines.
CASE STUDY 5 A temporal association between an adverse event and vaccine is not
sufficient to establish a cause and effect relationship
Background
Measles is a virus that causes a rash, cough and fever in the majority of patients, but can less
commonly lead to pneumonia, seizures, encephalitis and even death. Mumps is a virus that
causes fever, headache and swollen salivary glands (mainly parotid glands), but in more
serious cases can lead to deafness, viral meningitis and orchitis. Rubella, also known as
German measles, is generally a mild disease, but can result in serious birth defects in children
born to mothers infected in the early stages of pregnancy.
Vaccine
The MMR three-component live-virus vaccine is a combination vaccine delivered in a single
injection, designed to provide protection against measles, mumps and rubella. Originally
developed in the 1970s, the MMR vaccine is currently used in over 100 countries. A small
minority of vaccinees experience minor-to-moderate side effects including fever, rash and
joint pain, which subside within a few days.
Controversy
Since the MMR vaccine was introduced in the early 1970s, the number of children
experiencing each of the diseases and their complications has dramatically decreased.
However, controversy ensued upon publication of a paper in The Lancet in 1998, which
hypothesised a potential association between receiving the MMR vaccine and the
subsequent development of autism in children in their second year of life. This was
published by the primary author, after observing a small number of children with
inflammatory bowel disorders and neurological development disorder a few weeks or
months after they had received the MMR vaccination. The publication of this report and,
perhaps more poignantly, the subsequent negative media coverage surrounding the
publication led to a dramatic decrease in MMR vaccination rates and loss of public
confidence in the combined MMR vaccine. Subsequently, a number of serious
methodological flaws in this report coupled with improper or non-existent disclosures of
interest were revealed and The Lancet, and all but a single author, retracted the report.
The subsequent effects and present status
In the years following the original publication in The Lancet, many studies were designed
by different research groups to address this issue using different methodologies. Overall,
more than 25 studies were performed, all of which concluded there was no association
between autism and MMR vaccines; these studies have provided a clear answer to the
scientific community. However, it is taking some time to regain public trust in the MMR
vaccination. Statistics from a UK National Health Service (NHS) publication indicated that
coverage of the MMR vaccine in children up to 2 years of age in England fell from 92% in
Highlights
The occurrence of events with a temporal association with vaccines is not sufficient to
establish a cause and effect relationship e to show this, specific studies must be performed. If
the temporal coincidence is misinterpreted as being causal, consequences may be more
significant. The MMR case reflects the serious consequences of elevating a hypothesis of risk
above the real risk of vaccine-preventable diseases.
Conclusions
This short overview of vaccine development processes and
post-licensure surveillance describes how clinical development
and assessment of vaccines is constantly improving and evolving.
VACCINE DEVELOPMENT 149
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FURTHER READING
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Godlee F, Smith J, Marcovitch H. Wakefield’s article linking MMR vaccine and autism
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Offit P. Autism’s false prophets: Bad science, risky medicine and the search for
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150 UNDERSTANDING MODERN VACCINES
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(eds). Vaccines for Biodefense and Emerging and Neglected Diseases. London:
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INTERNET RESOURCES
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TRADEMARK DISCLAIMERS
RotaTeqÔ is a trademark of Merck Sharp & Dohme Corp; ArepanrixÔ, DaronrixÔ,
PandemrixÔ and RotarixÔ are trademarks of the GlaxoSmithKline group of companies;
CelvapanÔ is a trademark of Baxter International Inc; FocetriaÔ is a trademark of Novartis;
HumenzaÔ is a trademark of Sanofi Pasteur.