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Developmental
Neurobiology
Lynne M. Bianchi
This book contains information obtained from authentic and highly regarded
sources. Every effort has been made to trace copyright holders and to obtain their
permission for the use of copyright material. Reprinted material is quoted with
permission, and sources are indicated. A wide variety of references are listed.
Reasonable efforts have been made to publish reliable data and information, but
the author and the publisher cannot assume responsibility for the validity of all
materials or for the consequences of their use.
ISBN 9780815344827
Published by Garland Science, Taylor & Francis Group, LLC, an informa business,
711 Third Avenue, New York, NY 10017, USA, and 3 Park Square, Milton Park,
Abingdon, OX14 4RN, UK.
No one goes into science because they love to memorize facts; they go
into science because they love the process of discovery and problem
solving. The field of developmental neurobiology is filled with numerous
examples of creativity and insight that highlight the exciting process of
scientific discovery. As an instructor, it is a pleasure to be able to discuss
the motivation and experimental methods behind such studies. Whether
studies were done 125 years ago or 5 weeks ago, there is always something
intriguing to discuss—from the very first stages of neural induction in early
embryogenesis to the refinement of synaptic connections during postnatal
development.
One goal of this book is to provide historical background on topics to
help students gain a perspective on how ideas have evolved over time. As
instructors, it is sometimes tempting to focus only on the latest material.
However, somewhere along the way, I noticed that students did not always
fully grasp why a new discovery was so remarkable and realized that many
had not yet heard about the earlier work that suggested another outcome,
and were therefore unable to appreciate the excitement generated by
the newer findings. Thus, I have found providing such background to
be beneficial to students. As one reviews earlier studies, one comes to
appreciate how the experiments were done, what information influenced
how certain hypotheses were formed, and how unexpected findings have
shifted the focus of research efforts over time. While students will have to
memorize some detailed facts for a course, I hope that reading how the
facts were generated will lead to an appreciation of why those details are
so important for understanding how the nervous system develops.
A challenge often encountered by instructors teaching developmental
neurobiology is that, at many institutions, the course is an elective course
for undergraduate or first-year graduate students. Therefore, it is not
unusual for students to enter the class with different academic backgrounds.
Instructors need to balance providing enough information so students
without much advanced biology and neuroscience can keep up, without
also losing the students who have had the more advanced coursework.
In writing this book, I kept those differing levels of student experience
in mind. My goal was to provide sufficient background information in
each chapter so that all students will be able to follow the more detailed
and specific concepts as they are covered. This organization also gives
advanced students a review of material and allows instructors to skim over
background information when appropriate for a given class.
The opportunity to teach developmental neurobiology is always
a welcome experience because there are so many topics to discuss that
an instructor never runs out of material. However, when organizing the
course or planning a single lecture, an instructor is required to select
specific content to cover in the available time, knowing that other material
must be set aside. It is never an easy task. I’ve chosen to particularly
highlight experiments that had a major impact on the field or changed how
investigators approached a particular question. These examples are not the
only experiments that have shaped the field of developmental neurobiology,
but they are provided to illustrate the types of work that have been done.
To start, Chapter 1 provides an overview of concepts that will be
important for material covered in subsequent chapters. The chapter begins
I kept books out for extended periods of time. It is the students at Oberlin
College who motivated me to begin and continue this project, and I am
thankful for the many great conversations I have had with so many of them
over the years.
I thank Janet Foltin for initially contacting me and assuring me that
writing such a book was possible. The staff at Garland Science has made
writing a textbook a very smooth process. I greatly appreciate the careful
and thoughtful editing of Kathleen Vickers during the early stages of the
project. I am especially grateful to Monica Toledo for her commitment
to this book. She kept me on track, reviewed the text and illustrations to
make sure everything fit together, and recruited reviewers and compiled
their reviews for me. She also taught me a lot about the publishing process
along the way. I also thank Nigel Orme for his hard work and ability to turn
my sketches into clear illustrations that convey the ideas I was trying to get
across and Matthew McClements for his cover and text designs. I greatly
appreciate the time and effort of the many reviewers who read early drafts
of the chapters. The thoughtful and detailed reviews they provided were
extremely helpful and have certainly enhanced the content of the book.
And, finally, I want to acknowledge and thank my husband and children
for all of their support, good humor, and incredible patience during the
processes of completing this book. I hope they enjoy reading it as much as
I have enjoyed writing it.
ACKNOWLEDGMENTS
The author and publisher of Developmental Neurobiology gratefully
acknowledge the contributions of the following scientists and instructors
for their advice and critique in the development of this book: Coleen Atkins
(University of Miami); Karen Atkinson-Leadbeater (Mount Royal University);
Eric Birgbauer (Winthrop University); Jennifer Bonner (Skidmore College);
Martha Bosma (University of Washington); Sara Marie Clark (Tulane
University); Elizabeth Debski (University of Kentucky); Mirella Dottori
(University of Melbourne); Mark Emerson (The City College of New York);
Erika Fanselow (University of Pittsburgh); Deni S. Galileo (University
of Delaware); Suzanna Lesko Gribble (University of Pittsburgh); Jenny
Gunnersen (University of Melbourne); Elizabeth Hogan (Canisius College);
Alexander Jaworski (Brown University); John Chua Jia En (National University
of Singapore); Raj Ladher (National Centre for Biological Sciences); Stephen
D. Meriney (University of Pittsburgh); Mary Wines-Samuelson (University of
Rochester); and Richard E. Zigmond (Case Western Reserve University).
REGIONALIZATION OF THE MESENCEPHALON Sonic hedgehog (Shh) is necessary for floor plate
AND METENCEPHALON REGIONS 60 and motor neuron induction 86
Intrinsic signals pattern the midbrain–anterior Shh concentration differences regulate induction
hindbrain 61 of ventral neuron subtypes 89
Multiple signals interact to pattern structures Genes are activated or repressed by the Shh
anterior and posterior to the isthmus 62 gradient 90
FGF is required for development of the cerebellum 63 Shh binds to and regulates patched receptor
FGF isoforms and intracellular signaling pathways expression 91
influence cerebellar and midbrain development 63 RA and FGF signals are also used in ventral
FGF and Wnt interact to pattern the A/P axis 64 patterning 95
Chapter 4 Chapter 5
Patterning along the Proliferation and Migration
Dorsal–Ventral Axis 81 of Neurons 111
ANATOMICAL LANDMARKS AND NEUROGENESIS AND GLIOGENESIS 111
SIGNALING CENTERS IN THE POSTERIOR Scientists debated whether neurons and glia
arise from two separate cell populations 112
VERTEBRATE NEURAL TUBE 82
Precursor cell nuclei travel between the apical
The sulcus limitans is an anatomical landmark
and basal surfaces 113
that separates sensory and motor regions 83
Interkinetic movements are linked to stages of
The roof plate and floor plate influence gene
the cell cycle 114
expression patterns to delineate cell groupings
in the dorsal and ventral neural tube 83 The plane of cell division and patterns of protein
distribution determine whether a cell proliferates
VENTRAL SIGNALS AND MOTOR NEURON or migrates 115
PATTERNING IN THE POSTERIOR NEURAL Distinct proteins are concentrated at the apical
TUBE 85 and basal poles of progenitor cells 116
The notochord is required to specify ventral The rate of proliferation and the length of the
structures 85 cell cycle change over time 118
CELLULAR MIGRATION IN THE CENTRAL Cells of the Drosophila PNS arise along epidermal
NERVOUS SYSTEM 122 regions and develop in response to differing
In the neocortex, newly generated neurons levels of Notch signaling activity 151
form transient layers 123 Ganglion mother cells give rise to Drosophila
Most neurons travel along radial glial cells to CNS neurons 153
reach the cortical plate 124 Apical and basal polarity proteins are differentially
Cells in the cortical plate are layered in an segregated in GMCs 153
inside-out pattern 126 Cell location and the temporal expression
Changes in cortical migration patterns lead of transcription factors influence cellular
to clinical syndromes in humans 127 determination 154
The Reeler mutation displays an inverted MECHANISMS UNDERLYING FATE
cell migration pattern 128 DETERMINATION IN VERTEBRATE
Cajal–Retzius cells release the protein Reelin, CNS NEURONS 155
a stop signal for migrating neurons 128 Changes in transcription factor expression
Cortical interneurons reach target areas by mediate the progressive development of
tangential migration 130 cerebellar granule cells 156
Cell migration patterns in the cerebellum reflect Temporal cues help mediate the fate of cerebral
its distinctive organization 131 cortical neurons 157
Cerebellar neurons arise from two zones Epigenetic factors influence determination and
of proliferation 132 differentiation in vertebrate neurons 159
Granule cell migration from external to internal
layers of the cerebellar cortex is facilitated by DETERMINATION AND DIFFERENTIATION
astrotactin and neuregulin 134 OF NEURAL-CREST-DERIVED NEURONS 161
Mutant mice provide clues to the process of Environmental cues influence the fate of
neuronal migration in the cerebellum 136 parasympathetic and sympathetic neurons 161
Sympathetic neurons can change neurotransmitter
MIGRATION IN THE PERIPHERAL production later in development 163
NERVOUS SYSTEM: EXAMPLES FROM
NEURAL CREST CELLS 136 DETERMINATION OF MYELINATING GLIA
Neural crest cells emerge from the neural plate IN THE PERIPHERAL AND CENTRAL
border 137 NERVOUS SYSTEM 164
Neural crest cells from different axial levels Neuregulin influences determination of
contribute to specific cell populations 138 myelinating Schwann cells in the PNS 166
Cranial neural crest forms structures in the head 139 Precursor cells in the optic nerve are used to
study oligodendrocyte development 167
Multiple mechanisms are used to direct neural
crest migration 140 Internal clocks establish when oligodendrocytes
will start to form 168
Trunk neural crest cells are directed by permissive
and inhibitory cues 141 DEVELOPMENT OF SPECIALIZED
Melanocytes take a different migratory route SENSORY CELLS 170
than other neural crest cells 143 Cell–cell contact regulates cell fate in the
compound eye of Drosophila 170
Summary 144
Cell–cell contacts and gene expression patterns
Further Reading 144 establish R1–R7 photoreceptor cell types 173
Cells of the vertebrate inner ear arise from the
otic vesicle 175
Chapter 6
Notch signaling specifies hair cells in the organ
Cell Determination and Early of Corti 176
Differentiation 147 Cells of the vertebrate retina are derived from
LATERAL INHIBITION AND NOTCH the optic cup 178
RECEPTOR SIGNALING 148 The vertebrate retina cells are generated in a
Lateral inhibition designates future neurons in specific order and are organized in a precise
Drosophila neurogenic regions 148 pattern 180
Lateral inhibition designates stripes of neural Temporal identity factors play a role in vertebrate
precursors in the vertebrate spinal cord 150 retinal development 181
The CNTF receptor requires multiple components needed for presynaptic development and
to function 246 alignment with postjunctional folds 280
Growth factors unrelated to CNTF promote
survival of developing CG and motor neurons 247 MODELS OF SYNAPTIC ELIMINATION
IN THE NMJ 282
PROGRAMMED CELL DEATH DURING The relative levels of neuromuscular activity
NEURAL DEVELOPMENT 248 determine which terminal branches remain
Studies reveal cell death is an active process at the endplate 283
dependent on protein synthesis 250 BDNF and pro-BDNF are candidates for the
Cell death genes are identified in C. elegans 251 protective and punishment signals 283
Homologs of the C. elegans ced and egl genes Perisynaptic Schwann cells influence the
contribute to the mammalian apoptotic pathway 252 stability of synaptic connections 285
p75NTR and precursor forms of neurotrophins Summary 285
help mediate neuronal death during
development 254 Further Reading 287
Summary 255
Further Reading 256 Chapter 10
Synaptic Formation and
Reorganization Part II: Synapses
Chapter 9 in the Central Nervous System 289
Synaptic Formation and Reorganization
EXCITATORY AND INHIBITORY NEURONS
Part I: The Neuromuscular Junction 259
IN THE CENTRAL NERVOUS SYSTEM 290
CHEMICAL SYNAPSE DEVELOPMENT Many presynaptic and postsynaptic elements are
IN THE PERIPHERAL AND CENTRAL similar in excitatory and inhibitory synapses 292
NERVOUS SYSTEMS 260 The postsynaptic density is an organelle found
Reciprocal signaling by presynaptic and in excitatory, but not inhibitory, neurons 293
postsynaptic cells results in the development Cell adhesion molecules mediate the initial
of unique synaptic elements 261 stabilization of synaptic contacts 294
THE VERTEBRATE NEUROMUSCULAR Neurexins and neuroligins also induce formation
of synaptic elements and stabilize synaptic
JUNCTION AS A MODEL FOR SYNAPSE contacts 295
FORMATION 262
Reciprocal signals regulate pre- and postsynaptic
At the NMJ, the presynaptic motor axon releases development 296
acetylcholine to depolarize the postsynaptic
muscle cell 263 Dendritic spines are highly motile and actively
seek presynaptic partners 297
The distribution of AChRs has been mapped in
developing muscle fibers 264 BDNF influences dendritic spine motility and
synaptogenesis 298
The density of innervation to muscle fibers
changes during vertebrate development 266 Eph/ephrin bidirectional signaling mediates
presynaptic development 299
The synaptic basal lamina is a site of NMJ
organizing signals 267 Eph/ephrin signaling initiates multiple intracellular
pathways to regulate the formation of
AChRs cluster opposite presynaptic nerve postsynaptic spine and shaft synapses 301
terminals in response to agrin released by motor
neurons 269 Wnt proteins influence pre- and postsynaptic
specializations in the CNS 304
The agrin hypothesis is revised based on
additional observations 271 Different Wnts regulate postsynaptic development
at excitatory and inhibitory synapses 305
The receptor components MuSK and Lrp4
mediate agrin signaling 272 Glial cells contribute to CNS synaptogenesis 306
Rapsyn links AChRs to the cytoskeleton 276 SYNAPSE ELIMINATION AND
AChR subunits are synthesized in nuclei adjacent REORGANIZATION IN THE CNS 307
to the nerve terminal 276 The vertebrate visual system is a popular model
Perisynaptic Schwann cells play roles in to study synapse elimination and reorganization 307
NMJ synapse formation and maintenance 279 Spontaneous waves of retinal activity stabilize
The synaptic basal lamina concentrates laminins selected synapses in LGN layers 308
Among the most influential scientists of that period was Santiago Ramón y
Cajal, whose work is described in subsequent chapters. What is remarkable
about the work of Cajal and his contemporaries is that their descriptions
of how neurons grew and behaved in an embryonic environment were
all formulated based on images of fixed tissues. By careful observation at
different stages of development, the researchers were able to formulate
reasonable hypotheses about how cell growth and movement would take
place. While not every hypothesis put forth in the late nineteenth century
was found to be accurate, a surprisingly large number of the ideas were
later found to be correct or very nearly so.
By the early twentieth century scientists had developed a variety of
surgical, histological, electrophysiological, and tissue culture techniques
that advanced studies in the area of developmental neurobiology. Major
scientific milestones in the field often paralleled advances in other areas.
Figure 1.1 Early illustration of the nervous system. Scientists have long been
interested in understanding the paths nerve fibers take from the brain and spinal cord
to target regions throughout the body. This illustration was completed by the physician
Amé Bourdon in 1678. (Image courtesy of U.S. National Library of Medicine, Historical
Anatomies.)
dn 1.01
The vertebrate nervous system is divided into two main regions, the
central nervous system (CNS) and the peripheral nervous system
(PNS). The vertebrate CNS is comprised of the brain and spinal cord,
while the PNS consists of collections of neurons called ganglia that lie
outside of the CNS. The vertebrate PNS includes the neurons of the spinal
sensory (dorsal root) ganglia, cranial nerve ganglia, the enteric ganglia,
and ganglia of the autonomic nervous system (ANS). The invertebrate
nervous system is also divided into CNS and PNS regions; however,
different terminology is used for the various CNS and PNS structures, as
described in this chapter.
The cells of the CNS and PNS are the neurons and glia. A vertebrate
neuron consists of a cell body and cellular processes called axons and
dendrites (Figure 1.2A). Each neuron has only one axon but may
have several dendrites. The axon is typically longer than other neural
processes, has a uniform diameter, and ends in specialized regions called
presynaptic
synaptic axon terminal
vesicles
axon
action neurotransmitters
potential
axon
terminals
neurotransmitter postsynaptic
axon receptors neuron
dendrites
postsynaptic
neuron
the structures of the nervous system. For over a century and half, glia
were thought to be limited to this role. However, it is now clear that glia
serve a number of important functions in the nervous system and in
some cases participate in cell signaling. The glia in the vertebrate CNS
are the oligodendrocytes, astrocytes, microglia, and ependymal cells.
Oligodendrocytes extend cellular processes that form the myelin around
axons in the CNS. Each oligodendrocyte extends processes to wrap around
several nearby axons. Myelin provides a type of insulation that speeds
the propagation of action potentials. Thus, action potentials are conducted
faster along myelinated axons than along unmyelinated axons. Astrocytes
are star-shaped cells that perform many functions in the central nervous
system, such as maintaining the balance of ions in the extracellular fluid
surrounding neurons, interacting with cells that form the blood–brain
barrier, and communicating with neurons. Microglia are the smallest of
the glia cell types and generally function as the immune cells of the brain
to remove debris and pathogens in the CNS. Microglia may also interact
with signals from the immune system to modify the stability of synaptic
connections during development and in neurodegenerative conditions
(Figure 1.3A). Ependymal cells line the ventricles of the CNS, where they
produce cerebral spinal fluid (CSF).
In the vertebrate PNS, glial cells consist of the Schwann cells and
satellite cells. Most Schwann cells function similarly to oligodendrocytes.
However, each Schwann cell wraps around only one axon and does not
extend processes to nearby axons. The satellite cells surround neuronal
axon
neuron
axon
terminals
dendrites
oligodendrocytes astrocyte
(B) PNS
satellite cells
axon
terminals
neuron
dendrites
Figure 1.3 The vertebrate nervous system is comprised of neurons and glia.
dn 1.03
Neurons in the vertebrate nervous system are characterized by a single axon and many
dendrites. Axons are generally longer and of uniform diameter, while the dendrites tend
to be shorter, with tapered ends. Glial cells surround the neurons and perform diverse
functions. (A) Neurons in the central nervous system (CNS) are surrounded by numerous
glia, including astrocytes, microglia, and the myelinating oligodendrocytes that wrap
around the axons. (B) In the peripheral nervous system (PNS), the cell bodies of neurons
are surrounded by glial satellite cells, whereas the axons are wrapped by myelinating
Schwann cells.
cell bodies and appear to have functions similar to astrocytes (Figure 1.3B).
In recent years, glia in the vertebrate CNS and PNS have also been found
to release signals that regulate various aspects of neural development and
roles for specific types of invertebrate glial have begun to be determined.
cerebellum
spinal cord ventral/
cerebrum inferior ventral
cerebellum dorsal
ventral dorsal
spinal cord
ventral
ventral
caudal lateral medial lateral
(posterior)
Figure 1.4 The nervous system is organized around three axes. The positions of different neural structures are described relative to one
another along three axes. (A) In four-legged animals such as mice, the rostral–caudal or anterior–posterior axis of the nervous system is easily
seen as it extends from the region of the snout toward the tail. The dorsal–ventral axis extends from the back to the belly side of the animal.
(B) These same axes are present in the adult human nervous system, but the curvature of the brain and spinal cord lead to a corresponding
bending of the rostral–caudal (anterior–posterior) axis. (C) In the medial–lateral axis, those structures closest to the midline are called medial,
while those further from the midline are designated lateral as shown in these sections from the brain (pink) and spinal cord (yellow).
dn 1.04
neural folds
L–M–L POSTERIOR
Figure 1.6 The nervous system arises from neural plate ectoderm. (A) The neural plate ectoderm, located on the dorsal surface of the
embryo, is wider at the cephalic (head) region. (B) The lateral edges of the neural plate begin to curve upward, leading to the identification
of neural folds and a central indentation called the neural groove. Neural crest cells form at the crest of the neural folds. (C) The neural folds
eventually curl over and contact one another, thus forming the neural tube (blue). Epidermal ectoderm (yellow) surrounds the neural plate
ectoderm. M, medial; L, lateral.
dn 3.01/1.06
9780815344827_Ch01.indd 9 13/10/17 2:05 pm
10 Chapter 1 An Introduction to the Field of Developmental Neurobiology
Soon after the neural tube closes, the anterior region of the neural tube
expands and constricts at specific locations to form three primary brain
vesicles. These vesicles are called the prosencephalon (forebrain),
which is located at the most anterior (rostral) region of the neural
tube, the mesencephalon (midbrain), and the rhombencephalon
(hindbrain), which is located just anterior to the developing spinal cord
(Figure 1.7A). As development continues, five secondary brain vesicles
are formed. The prosencephalon forms two vesicles, the telencephalon
and diencephalon, the mesencephalon remains as a single vesicle,
and the rhombencephalon is divided into the metencephalon and
myelencephalon (Figure 1.7B).
The five secondary vesicles correspond to the sites of origin for
adult CNS structures. The telencephalon gives rise to cerebral cortex,
hippocampus, basal ganglia, basal forebrain nuclei, olfactory bulb, and
lateral ventricles. The diencephalon gives rise to structures that include
the thalamus, hypothalamus, and the optic cup—the precursor of the retina
that contains the sensory cells of the visual system. The mesencephalon
gives rise to the midbrain tegmentum, or central gray matter, of the
brainstem as well as the tectal regions (the superior and inferior colliculi)
that are important relay centers for visual and auditory information,
respectively. The metencephalon will ultimately form the cerebellum and
pons, while the myelencephalon will form the medulla. The signals that
coordinate to regulate the formation of these different CNS regions along
the anterior–posterior and dorsal–ventral axes are described in Chapters 3
and 4, respectively.
(A) (B)
ANTERIOR
telencephalon
diencephalon
prosencephalon mesencephalon
mesencephalon metencephalon
rhombencephalon myelencephalon
dn n3.100/1.07
The formation of the blastula, gastrula, neural plate, neural tube, and brain
vesicles occurs at specific times in embryonic development in each of
the animal models studied. While the sequence of developmental events
is consistent across all vertebrate species, the actual time that these
structures arise varies. Developmental age is reported as the number of
hours, days, or weeks post fertilization or by staging criteria established
for each species. The stages are based on various morphological criteria,
including embryo length and the presence of key developmental features,
such as the number of somites (the blocks of mesoderm that line either
side of the neuraxis). Such staging corrects for any variations that might
arise from genetic or environmental influences.
Human development is often referred to in terms of weeks of
gestation or Carnegie stages—stages first defined in the early twentieth
century by Franklin Mall and George Streeter, both of whom worked at
the Carnegie Institute in Washington, DC. Mice are described in terms of
embryonic (E) days or days post coital (d.p.c.) and are often staged using
criteria established by Karl Theiler. Development of chick embryos is
reported based on the hours or days post fertilization or by the duration
of incubation. Chick embryos are staged using criteria published by Viktor
Hamburger and Howard Hamilton.
The development of the chick embryo begins in utero and continues
after the egg is laid (about 20 hours after fertilization). In utero development
involves the formation of the blastoderm at 10–11 hours after fertilization.
The onset of gastrulation begins about the time the egg is laid and
subsequent developmental events are easily monitored by cutting a small
hole, or window, in the egg. Thus, the chick embryo is an extremely useful
model for viewing neural development. Another useful feature of the chick
egg is that development of a fertilized egg can be halted for several days if
the eggs are maintained at room temperature. Development resumes when
the eggs are placed in an incubator at 37.5°C. Figure 1.8 shows several
of the stages first published by Hamburger and Hamilton in 1951. At these
stages of development, hours refer to the number of hours the eggs were
incubated, rather than the hours post fertilization. The first somites and
the head neural folds are visible at Hamburger and Hamilton (HH) stage 7
(23–26 hours of incubation). In the chick, the three primary brain vesicles
are detected at HH10 (33–38 hours) and the five secondary vesicles are
observed after 40–45 hours of incubation (HH11). The embryo turns to the
side beginning at HH13 (48–52 hours) and the enlargement and refinement
of the brain vesicles is easily viewed in the translucent embryo from HH
14–21 (about 2–3 days after incubation).
Figure 1.9 compares the development in humans and mice using
Carnegie and Theiler criteria, respectively. In humans, the blastula is
detected in the uterus at four days after fertilization (Carnegie stage 3, CS3)
and gastrulation begins at day 16 (CS7). The neural plate and neural folds
become evident at day 18 (CS8). The three primary vesicles form during
the third and fourth week of gestation (days 20–24; CS8–11) and the five
secondary vesicles become visible during the fifth week of gestation (CS14).
In mice, the blastula stage embryo is formed 3 to 4 days post coitus
(d.p.c.), corresponding to Theiler stages 4–5 (TS04–05). Gastrulation begins
at 6.5–7.5 d.p.c. (TS09) and the neural plate forms at 7.5–8 d.p.c. (TS11). The
three primary vesicles are visible at 8–8.5 days of embryogenesis (TS12–13)
and the five secondary vesicles are detected at days 9–10 (TS15–16). The
development of a newborn mouse (TS27; 19–20 d.p.c.) is similar to that of a
9-week human (CS23). Human development continues for about 38 weeks
(9 months).
11 12 13 14
15 16 17
18
19 20
21
dn 1.08
1 cm
(× 35) (× 1.5)
oocyte TS01 TS02–08 TS09 TS11 TS13 TS16 TS19 TS21 TS22 TS23 TS25 TS27
Figure 1.9 Comparison of stages of mouse and human embryonic development. Morphological criteria are used to identify the stages
of embryonic development. Mouse development is staged by the criteria of Theiler, whereas human development is marked by Carnegie
stages. As shown in the diagram, Theiler stage 13 (TS13) is equivalent to Carnegie stage 11 (CS11). At these stages, the three primary vesicles
are observed. TS16 is equivalent to CS11–14, the stages when the five secondary brain vesicles are formed. TS27 is a newborn mouse, which is
at a similar stage of development as a nine-week human (CS23). Arrows indicate times at which human and mouse development are at a similar
stage. (From Xue L, Cai J-Y, Ma J et al. [2013] BMC Genomics 14:568.)
dn 1.09
Fish and amphibians have also been very popular vertebrate animal
models in studies of neural development. The stages of development in the
zebrafish have been documented by Monte Westerfield, Charles Kimmel,
and colleagues. The cells of the zygote begin to divide about 40 minutes
after fertilization and are easily viewed above the yolk. The zebrafish
blastula forms at a little over two hours post fertilization, when 128 cells,
the blastomeres, are present. The blastula-stage embryo continues to
develop through multiple stages during the first five hours after fertilization
and the blastoderm is identifiable a little over 4.5 hours post fertilization
(h.p.f.; Figure 1.10). After the blastula-stage is complete, epiboly and
gastrulation, the movement and thinning of cell layers, begins just over
5 h.p.f. At these stages, the embryo begins to curl around the central
yolk. Development is measured in terms of the percentage of epiboly,
indicating the percent of the yolk that is surrounded by the blastoderm. At
50% epiboly, gastrulation begins. At just over 6 hours, the embryonic shield,
a key structure in the process of neural induction (Chapter 2), is present.
At 90% epiboly, 9 h.p.f., the neural plate is visible. At the completion of
epiboly and gastrulation, somites are detected (10 h.p.f.), and by 16 hours,
there are 14 somites and the three primary brain vesicles are observed. At
24 hours, the five secondary brain vesicles are present. At the same time,
eight cells sixty four 256 high stage dome 30% epiboly 50% epiboly shield
zygote
25-somites
24 hr
prim 5
33 hr
prim 20
48 hr
Figure 1.10 Examples of zebrafish development from zygote to hatching. Cells of the zebrafish zygote begin to divide about 40 minutes
after fertilization. The resulting blastomeres continue to divide as the blastodisc forms above the yolk, as seen in the eight-cell stage shown
in this figure. The blastula stage of development begins at the 128-256 cell stage (2.25-2.5 hours post fertilization, h.p.f.) then progresses
through multiple stages. The high stage, for example, indicates the period that the blastodisc is located “high” on the yolk. The blastula stage
continues until a little over 4 h.p.f. (dome stage). By about 4.5 hours, epiboly can be measured, indicating the percentage of the yolk surface
that is surrounded by the embryo. At 50% epiboly gastrulation begins and at 90% epiboly, the neural plate is present. Somites are first visible
by 10 h.p.f., and the divisions of the brain vesicles are first observed at the 14-16 somite stage. The embryo begins to straighten away from the
yolk at 24 h.p.f. (prim 5), when development is measured by the myotome number that the tip of the primoridum (prim) of the lateral line organ
reaches. By 48 h.p.f., the embryo hatches. (From Westerfield M [1993] The Zebrafish Handbook, 2nd ed, University of Oregon Press.)
the embryo begins to straighten away from the yolk sac. The embryos are
now measured by indicating which myotome (the segment of the somite
dn 1.10
that later gives rise to muscle) that the tip of primordium (prim) of the lateral
line organ (a sensory organ found in aquatic vertebrates) reaches. Thus,
prim 5 indicates that the tip of the primordium of the lateral line reaches the
fifth myotome. The embryo hatches at about 48 hours and enters the larval
stages by 72 hours post fertilization. The larval stages last up to 29 days.
Juvenile zebrafish form at day 30 and become adults by day 90.
Frogs are another frequently used vertebrate animal model in studies
of neural development. Among the most commonly used frogs are Xenopus
laevis. These frogs provide many advantages for researchers, including
the ability to induce frogs to produce eggs year round and the one-year
cycle needed to complete development from a fertilized egg to an adult
frog. The description that follows refers to the timing of developmental
events in Xenopus based on the time post fertilization and the staging
criteria of Pieter Nieuwkoop and Jacob Faber. The timing of these events
may be slightly different in other frogs. In Xenopus, blastula-stage embryos
are noted by four hours after fertilization (stage 7). Gastrulation begins
approximately 7–10 hours post fertilization (stages 10–12) and leads to the
formation of the neurula-stage embryo, the stage when the neural tissue
begins to form (12 and 13.5 hours post fertilization; Figure 1.11). The
neurula stage (stages 13–21) continues until the early tailbud-stage embryo
forms 24–32 hours post fertilization (stages 22–28). Primary brain vesicles
appear around 24 hours after fertilization (stage 22) and the five secondary
vesicles about 32 h.p.f (stage 28). The embryo develops into a tadpole by
96 hours (stages 45–50), before undergoing metamorphosis (stages 51–65)
and reaching the adult stage approximately 12 months later (stage 66).
stage 63 stage 66
(dorsal) (dorsal)
1 2 3–4 5–8
approximate days
after fertilization
9–12
Figure 1.12 Development of the fruit fly Drosophila melanogaster. The fertilized Drosophila egg (stage 1) undergoes cleavage (stage
2) and forms a syncytial blastoderm 2–3 hours after fertilization (stage 4) followed by a cellular blastoderm (stage 5, not shown). The embryo
then begins gastrulation (stages 6-7) and forms the late stage embryo 7–22 hours after fertilization (stages 12-17). The embryo enters the first
larval stage by 24 hours after fertilization, and continues through three larval instar stages before forming a pupa at 5–8 days post fertilization.
Metamorphosis takes place and the adult fly emerges 9–12 days after fertilization.
(C) (D)
protocerebrum
Figure 1.14 The Drosophila central
deutocerebrum circulatory system
nervous system is comprised of pairs of
tritocerebrum digestive system ganglia. The three pairs of ganglia that make
up the Drosophila brain are divided into
protocerebrum (forebrain), deutocerebrum
(midbrain), and tritocerebrum (hindbrain).
These ganglia connect to the ventral nerve
cord comprised of subesophageal, thoracic,
and abdominal ganglia. The nervous system
(blue) is shown relative to the digestive (green)
subesophageal thoracic abdominal and circulatory (yellow) systems. (Adapted
ganglia ganglia ganglia from Agricultural and Life Sciences, General
Entomology, North Carolina State University.)
glia appear similar to vertebrate glia. The cortex glia are most like astro-
cytes, the neuropil glia are similar to oligodendrocytes, and the peripheral
glia function similar to Schwann cells. The cortex, surface, and neuropil
glia can also function like the microglia found in the vertebrate CNS.
twitching starts
comma stage
bean stage
fertilization
174-cell
190-cell
44-cell
87-cell
99-cell
2-cell
4-cell
8-cell
0 50 100 150 200 250 300 350 400 450 500 550 600 650 700 750 800 840 min
AB
gastrulation
Figure 1.15 An adult C. elegans can form within three days of fertilization. A timeline of developmental events through hatching for
C.elegans maintained at 22 degrees Celsius. The egg is fertilized and begins to divide in the worm. Gastrulation begins when the egg is laid,
about 150 minutes after fertilization, when there are 26 cells present. Gastrulation continues until 330 minutes (5.5 hours) after fertilization, when
421 cells are present. The timing of the migration of founder cells during gastrulation is indicated below the timeline. As the worm continues to
elongate and become thinner, the worm folds over itself 1.5 times (tadpole stage), then two times (plum stage) and finally three times (pretzel
stage). Worms hatch 14 hours after fertilization, when
dnthere
1.15are 558 cells. The resulting larvae then progresses through four larval stages (L1–L4)
before forming an adult worm. Under favorable environmental conditions, the adult worm emerges about 56 hours after fertilization. (Adapted
from The Worm Atlas.)
stage, approximately 150 minutes after fertilization, when there are about
26 cells present. Gastrulation is initiated as cells move inward to form the
gut and muscle tissues, while the hypodermis, the equivalent of ectoderm
in vertebrates, remains as the outermost layer. Cells of the hypodermis that
subsequently move to the inside of the embryo give rise to the majority
of the neurons. The remaining cells of the hypodermis migrate over the
surface of the embryo to form the epidermis. Gastrulation continues until
the number of cells increase to 421 (about 5.5 hours after the first cleavage).
During the final stages of embryogenesis, the shape of the embryo
changes from a spherical structure to the elongated shape of the adult. As
elongation continues, the worm begins to fold over first 1.5 times (tadpole
stage), then 2 times (plum stage), and eventually 3 times (pretzel stage).
Hatching occurs about 14 hours after fertilization, when there are 558 cells.
The resulting larva then progresses through the four larval stages (L1–L4)
before forming an adult worm. During the larval stages, additional neurons
are produced, with the majority born during the late L1 stage. The length
of time in each larval stage depends, in part, on environmental conditions
such as temperature, food supply, and population density. Under favorable
conditions, it takes less than 2.5 days for a C. elegans to complete the life
cycle from fertilized egg to adult worm.
The cell fate options available to a particular cell in C. elegans are
established early in development with the asymmetric division of the
zygote into the AB and P founder cells. A series of cell divisions then results
in a total of six founder cells that are designated AB, P, E, MS, C, and D
(Figure 1.15). Each founder cell gives rise to progeny in a specific pattern.
The initial division of the zygote yields an AB cell located at the anterior pole
and the P1 cell at the posterior pole of the embryo (Figure 1.16A). Next,
the AB cell divides to produce two daughter cells, the anterior AB.a and the
P2 P3 D
P1 EMS
POSTERIOR P4 (germ line)
AB.p E
AB.pr
egg
AB.pl
AB.ar
ANTERIOR
AB.al AB P1
fertilized egg
AB.a MS
AB (epidermis,
(A) neurons, pharynx)
AB.a AB.p EMS P2
D P4
Figure 1.16 Cells in C. elegans divide in a precise order. (A) The asymmetric division of the fertilized egg leads to formation of a larger AB
founder cell at the anterior pole of the developing embryo and a smaller P1 founder cell at the posterior pole. The cells continue to divide until
a total of six founder cells are produced (AB, P, E, MS, C, and D; bold letters, inset). As shown in the diagram, each dividing cell produces cells in
a specific location. The AB cell (green) gives rise to the AB.a cell at a more anterior site and the AB.p at a more posterior site. These cells divide
to produce additional daughter cells designated as AB.al and AB.ar, the left- and right-handed daughter cells of AB.a. Similarly AB.p divides to
produce AB.pl and AB.pr. The P1 cell (red) establishes the germ line (red cells) and various somatic cells (yellow, orange, purple, and blue). The
AB founder cell gives rise to most neurons in C. elegans. Descendants of MS and C give rise to a small number of the neurons in C. elegans. (B)
Regions of the worm nervous system are stained with green dn 6.03/1.16
fluorescent protein to outline regions of the brain (head ganglia), the tail ganglia,
and the dorsal and ventral nerve cords. (A, adapted from Alberts B, Johnson A, Lewis J et al. [2008] Molecular Biology of the Cell, 5th ed.
Garland Science. B, courtesy of Harold Hutter.)
posterior AB.p. Shortly after the AB cell divides, the P1 cell divides, produc-
ing the more posterior P2 cell and the more anterior EMS cell (Figure 1.16A).
As more AB cells are generated, the location of a cell relative to its
sister cell is specified along the anterior–posterior axis. Thus, the AB.a1 cell
is the “left-handed” daughter cell of an anterior AB cell, whereas AB.pr is the
“right-handed” daughter of the posterior AB daughter cell (Figure 1.16A).
The EMS cell divides to produce E and MS cells, whereas P2 produces C and
P3. P3 then divides, producing D and P4, the cell that establishes the germ
line. Thus, the P1 founder cell functions like a stem cell in that it gives rise
to both somatic and germ cells.
Each founder cell produces progeny that go on to contribute to
specific tissues. However, not all cells of a given body system arise from a
single founder cell type. For example, most of the 302 neurons arise from
descendants of the AB founder cell, but some arise from the MS and C cells
that descend from the P1 founder cell. In all cases, however, the individual
neuronal types always arise from the same precursor and are always found
in the same location in the body.
C. elegans has a somatic and pharyngeal nervous system. The somatic
nervous system contains 282 neurons found in the head and tail ganglia as
well as in the ventral and dorsal nerve cords (Figure 1.16B). These regions
contain sensory, motor, and interneurons. The head region also contains
numerous sense organs called sensilla that are comprised of free nerve
endings and glial sheath and socket cells. The pharyngeal nervous system
contains 20 neurons. The pharynx in C. elegans is segregated from the rest
of the tissues of the body by a unique basement membrane and functions
largely independent of the other parts of the worm.
There are 56 glial cells in C. elegans that are designated into three
categories: sheath, socket, and glial-like nerve ring (GLR). The 24 sheath
and 26 socket glia are derived from ectoderm, whereas the six GLR cells
are derived from mesoderm. While the functions of glia in C. elegans are
not as well characterized as in other animal models, they appear to assist
in synaptic signaling and play roles in the development, maintenance, and
activity of their associated synapses. The GLR cells seem to be specifically
associated with signaling that regulates motor movement. Unlike verte-
brates and Drosophila, axons in C. elegans are not myelinated, so glia do
not wrap around axons to speed neural conduction.
Despite the variations in anatomy and cellular organization among
the different animal models, many of the genes and signaling pathways
are conserved across species, allowing discoveries in one animal model to
impact discoveries in another. This is particularly helpful when a technique
is more readily applied to a simpler invertebrate animal model than a more
complex vertebrate model.
In all animals, each neuron found in the nervous system must selectively
express specific cellular components, such as neurotransmitters, ion
channels, cell surface receptors, cytoskeletal elements, and other proteins.
The regulated production of these specialized proteins gives individual
neurons their unique characteristics and allows them to perform specific
functions in the nervous system. Neurons, like other cells, produce only
the proteins required at a particular stage of development. In order to
selectively produce these proteins, individual genes must be turned on
(expressed) or turned off (repressed) at the correct stage of development.
The process of turning genes on or off is called gene regulation.
EXTRACELLULAR
LIGAND
CELL-SURFACE
RECEPTOR
plasma membrane
of target cell
Binding specificity combined with the ability of cells to regulate the expression
of the multitude of ligands and receptors ensure that specific signaling
pathways are only available to a cell when needed. Thus, cells become
specialized so they only respond to required signals at each developmental
stage and ignore other signals that may also be present at that time.
Because each cell subtype in the nervous system expresses a unique set
of genes and proteins, researchers have developed several techniques to
identify where and when these molecules are expressed during development
and in adulthood. Among the techniques are those that use microscopy to
identify the distribution of genes and proteins in tissues or individual cells.
These approaches lead not only to understanding the cellular distribution of
genes and proteins, but also provide a way to label or mark particular cells
and track them over the course of development. This has been especially
helpful, because the outward morphological appearance of embryonic
neurons is often homogeneous, making it difficult, or impossible, to identify
a cell with any certainty following any sort of experimental manipulation.
To visualize gene expression in neural tissues, scientist use in situ
hybridization. With this technique, mRNA is visualized by incubating
whole embryos, tissue sections, or cultured cells with probes made up of
a DNA nucleotide sequence of interest. These probes are labeled with a
radioactive or fluorescent marker so that when the DNA probe binds to
the corresponding mRNA sequence, the cells expressing that mRNA can
be visualized. Identifying gene expression patterns often provides insight
into the putative function of that gene in a given cell, while also providing
a labelling method to track changes in gene expression under normal
and experimental conditions. Examples of experiments using in situ
hybridization are found in Figures 3.24 and 4.20.
Scientists use immunohistochemistry or immunocytochemistry
to label proteins in tissues or cells, respectively. These methods take
advantage of the immune response in which an animal develops antibodies
to a foreign substance. For example, one method of generating antibodies
is to inject rabbits with a protein of interest. The animals develop
antibodies to the protein that are then isolated from the blood serum. The
resulting antibodies, called primary antibodies, are then added to tissues
or cell cultures, where they bind to the target protein. These antibodies
are visualized by either adding an enzymatic reporter molecule, such as
horseradish peroxidase, or a fluorescent probe directly to the primary
antibody, or by adding one of the labels to a secondary antibody that
recognizes and binds the primary antibody. These methods often provide fine
details on the distribution of a protein within a cellular region. Examples of
such methods are shown in Figure 1.13, in which a neuron-specific protein
is used to visualize the entire nervous system (Figure 1.13B), and another is
used to identify a single presynaptic element known as the active zone protein
(see Chapters 9 and 10), which is localized to presynaptic nerve terminals
(Figure 1.13D). Another example of immunolabelling to identify the
distribution of synaptic contacts on a single neuron is shown in Figure 10.1.
have been used to alter development. Among the common approaches used
today are techniques to manipulate tissues in vivo and in vitro and methods to
evaluate naturally occurring and experimentally induced genetic mutations.
Tissue manipulations have been used since the earliest studies of
developmental neurobiology. These methods typically involve surgically
removing or rotating a particular region of the developing embryo or grafting
extra tissue onto a region of the embryo. Several examples of these types of
studies are highlighted in Chapters 2, 4, 7, and 8. Scientists can also observe
effects of tissue manipulations in cell culture preparations. In these assays,
tissues of interest are surgically dissected from an embryo at a given stage of
development and placed into a cell culture dish. The dishes are often coated
with substrate molecules that support the attachment and growth of the cells
under investigation. The tissues are then covered in a nutrient-containing
fluid (cell culture medium). To identify sources of signals that promote the
survival, growth, or differentiation of a neural population, the tissues may be
grown in the presence of other tissues. In some experiments, specific proteins
may be added to test whether they have a direct effect on the developing
cells. Examples using these approaches are discussed in Chapters 4, 7, and 8.
Cell culture techniques to study neural development were introduced in the
1920s and remain a very popular method for analyzing the development of
neural cells. An advantage of cell culture is the ability to test single reagents
on a select population of cells. A limitation to the method is that the artificial
environment removes other tissue-derived cues that may interact with and
alter the effects of the reagent under investigation.
Scientists also observe the effects of additional or missing genes. Such
genetic manipulations have been instrumental in understanding neural
development in both invertebrate and vertebrate animal models. Studies of
naturally occurring gene mutations in Drosophila, C. elegans, and mice have
been documented for nearly a century. A number of these spontaneously
occurring mutations have provided an extensive body of data on the
development of the nervous system. As detailed in Chapter 6, scientists
investigating Drosophila initially relied on naturally occurring mutations,
but soon developed methods to experimentally mutate genes of interest.
Methods for blocking, reducing, or increasing gene expression were also
developed for many vertebrate animal models. Examples of mutations
induced in frogs are found in Figures 2.10, 2.11, and 6.2, while examples from
Drosophila are shown in Figures 7.20 and 7.22. A method to experimentally
delete, or knock out, individual genes in mice was introduced in the 1980s.
The development of a technique for generating gene knockout mice
greatly advanced studies of mammalian neural development (Box 1.2).
Other methods to selectively interfere with gene expression use short
interfering RNAs (siRNAs). Segments of RNA consisting of 20–25 base pairs
that are complementary to a gene sequence of interest are introduced to cells
by electroporation, a method in which an electrical current is used to make
cell membranes more permeable. siRNAs can be electroporated into specific
regions of an embryo, where they degrade the target mRNA and prevent
translation of the protein, thereby providing insight into the normal function
of the protein in vivo. Examples of this approach are shown in Figure 4.10.
Researchers continue to refine techniques to selectively alter gene and
protein expression in cells at specific stages of development, providing finer
resolution of the molecular pathways involved in neural development. There
are limits to these approaches, however, and researchers are aware that
induced changes represent an artificial environment and that complementary
studies are needed to test the role of the molecules during normal
development. Despite the inherent limitations of these approaches, to date
such tissue and genetic manipulation studies have provided considerable
insight into mechanisms underlying normal neural development.
The term “knockout mouse” is now commonly used this first litter contain cells that arise from both mice.
throughout the scientific literature. The technique has These chimeras, made up of genetic contributions from
become so widely used and discussed that it may be the blastocyst and surrogate mice, can be identified by a
difficult to imagine what a surprising and significant coat color that differs from that of the surrogate mother.
impact it had when it first emerged in the early The male chimeras are then mated with females of
1980s. In fact, when Mario Cappecchi first proposed another coat color, such as white (step 4). The resulting
the technique to a funding agency, the proposal was pups are again selected by coat color to identify those
turned down because reviewers believed the process that carry genes from the ES cells (for example, mice
could not work effectively. The technique relies on the that are black). The DNA from these mice is then
process of homologous recombination—the ability sequenced and those mice that are heterozygous—that
of an inserted DNA sequence to line up in the correct is, the mice that contain one copy of the disrupted gene
orientation and location and replace a specific gene. and one copy of the normal gene—are then mated with
Homologous recombination takes place naturally and littermates that are also heterozygous for the mutation.
frequently in bacteria, yeast, and viruses, but under One quarter of the resulting litter will contain mice
normal conditions is rare in mammalian cells, except that are homozygous for the mutation. These are the
in germ-line and embryonic stem (ES) cells—that knockout mice that contain two copies of the mutated
is, the cells that have the ability to give rise to all the gene and are the ones to be examined for anatomical,
cells in an organism. Mammalian cells are also capable physiological, or behavioral deficits. Other mice in the
of the process when foreign genes are intentionally litter will be normal, or wild-type mice, which carry
inserted, such as occurs in the process of generating two copies of the normal gene, and the others will be
knockout mice. heterozygous.
Figure 1 outlines the steps used to generate mice Depending on the particular gene disrupted, the
lacking a gene of interest. In the first step, the target resulting changes—the phenotype of the mice—can be
gene is removed from a segment of DNA and selector mild, suggesting that another gene compensates for
genes are inserted to create a targeting vector. Two the loss of the targeted gene, or severe, sometimes
commonly used selector genes are the neomycin even resulting in death of the embryo prior to birth. As
resistance (neoR) gene—a positive selector gene—and scientists have found over the years, the heterozygous
the herpes thymidine kinase (tk) gene—a negative mice often have a milder phenotype than the
selector gene. The neor gene is flanked by DNA present homozygous mice, displaying a gene dosage effect—
in the target gene, while the tk gene is located outside that is, those with one copy disrupted are impacted
the targeted sequence. less than those with two copies disrupted. Embryonic
In the second step, the target vector is introduced into lethal mutations can sometimes provide information
mouse embryonic stem (ES) cells. Electroporation on the role of the gene, depending on the stage when
provides a small electrical charge that opens the the embryos die. Such severe mutations are often
cell membranes and permits entry of the DNA. The of limited value, however, particularly if the embryo
cells are grown in a culture medium that contains dies prior to the onset of gene function in the cell
the drugs neomycin and glanciclivor. Cells that have population of interest.
inserted the neoR gene in place of the targeted gene A refinement to the gene knockout technique was
will survive in the medium containing the antibiotic introduced in the late 1980s that allows for researchers
neomycin. Glanciclivor will kill any cells that retain the to delete a gene in selected tissues or at specific
tk gene; thus, the cells that have randomly inserted the stages of development and therefore overcome the
targeting vector outside the gene sequence of interest limitations of deleting a gene in every cell of the body.
will be eliminated. By using both positive and negative The basic method used to create such conditional
selector genes, all or nearly all of the cells surviving in knockout mice involves inserting loxP (locus of
the culture medium will be those with the targeted gene X-over P1) in noncoding regions of the DNA sequence
disrupted. of interest using homologous recombination. These
The remaining ES cells are then injected into blastocyst- segments are said to be “floxed” (flanked by loxP).
stage mouse embryos from mice of a particular coat color The floxed sites of the DNA are recognized by Cre
(Figure 1, step 3). The blastocysts are implanted into a recombinase that mediates the exchange of DNA.
surrogate, or foster, female mouse of a different coat The conditional expression of the gene is regulated
color to develop to term. The tissues of the pups from in one of two ways—namely, Cre recombinase can
neoR tk
neoR tk
targeting
vector
homologous homologous
DNA 1 DNA 2
in some cells, the targeting vector in other cells, the targeting vector
recombines with the target gene and recombines in the wrong place, a
knocks out one copy of the target gene random section of the chromosome
step 3 step 4
injecting cells into breeding
a new embryo
Cells that have successfully The resulting chimeric (spotted) mouse Among their offspring are
incorporated the target vector contains a mix of its own cells and the mice that are capable of
are then selected and injected heterozygous knockout cells. This passing the knockout gene to
into a normal developing mouse is bred with a normal (white) their own offspring.
mouse embryo. mouse.
Figure 1 The creation of a knockout mouse. An outline of the steps used to generate mice with the targeted gene disruption.
Summary
Further Reading
Alberts B, Johnson A, Lewis J et al. (2015) Molecular Biology of Gilbert SF (2014) Developmental Biology, 10th ed. Sinauer
the Cell, 6th ed. Garland Science. Associates.
Capecchi M (1994) Targeted gene replacement. Sci Amer Hamburger V & Hamilton HL (1951) A series of normal stages
270(3)52–59. in the development of the chick embryo. J Morph 88(1):49–92.
Diaper DC and Hirth, F (2014) Immunostaining of the Haretenstein V (1993) Atlas of Drosophila Development. Cold
developing embryonic and larval Drosophila brain. In Brain Spring Harbor Laboratory Press.
Development Methods and Protocols (Sprecher SG ed), pp
Kimmel CB, Ballard WW, Kimmel SR et al. (1995) Stages of
3–17. Humans Press.
embryonic development of the zebrafish. Dev Dyn 203:253–310.
Friedel RH, Wurst W, Wefers B and Kuhn, R. (2012) Generating
Luo L (2016) Principles of Neurobiology. Garland Science.
conditional knockout mice. In Transgenic Mouse Methods and
Protocols, Methods in Molecular Biology. (Hofker MH & van Nieuwkoop PD & Faber J (1967) Normal Table of Xenopus
Deursen JM eds), pp 205–231. Humana Press. laevis. Elsevier.
Oikonomou G & Shaham S (2011) The glia of Caenorhabditis Stix G (1999) Profile (Mario Capecchi): Of survival and science.
elegans. Glia 59:1253–1263. Sci Amer 281(2):26–27.
Sadler TW (2014) Langman’s Medical Embryology, 13th ed. Vanderah TW & Gould DJ (2016) Nolte’s The Human Brain: An
Wolters Kluwer Health. introduction to its Functional Anatomy, 7th ed. Elsevier.
Schoenwolf GC, Bleyl SB, Brauer PR & Francis-West PH (2014) Westerfield M (1993) The Zebrafish Handbook, 2nd ed.
Larsen’s Human Embryology, 5th ed. Churchill Livingstone. University of Oregon Press.
Stern CD & Holand PWH (1993) Essential Developmental
Biology. IRL Press.
C. elegans
eChickAtlas
Altun, Z. F. and Hall, D. H. 2005. Introduction to C. elegans
http://www.echickatlas.org/ecap/hamburger_hamilton_ anatomy. In WormAtlas. http://www.wormatlas.org/
stages/hamburger_hamilton_stages.html ver1/handbook/anatomyintro/anatomyintro.htm
Neural induction has been the focus of research efforts for well over a
century. As detailed below, these processes remain highly conserved
across vertebrate species, though certain differences are noted and will
be outlined in the examples that follow. Despite significant differences in
nervous system morphology, the signaling molecules used to designate
neural tissues are largely homologous in vertebrates and invertebrates,
demonstrating the evolutionary conservation of this fundamental, early
process of neural development.
ANIMAL POLE egg cells from amphibians, for example, the cytoplasm is segregated into a
lighter pigmented vegetal pole and more densely pigmented animal pole
(Figure 2.1). The vegetal pole gives rise to gut structures, whereas the
DORSAL animal pole gives rise to the nervous system and the epidermis (the surface
layer of skin). In animals with large eggs, such as amphibians, cytoplasmic
VENTRAL differences are easily identified prior to fertilization, and subsequent
rearrangements in the cytoplasm are observed following fertilization.
In other vertebrates, including mammals and birds, the cytoplasmic
VEGETAL POLE differences are not as obvious, even after fertilization.
Following fertilization, the egg cell (zygote) divides into a number
Figure 2.1 Regions competent to become
neural tissue are established in the egg of cells called blastomeres that surround a central cavity known as a
cell. Eggs from amphibians are divided blastocoel (Figure 2.2). A group of blastomeres that aggregate above the
into animal and vegetal poles that go on to cavity is called the blastoderm. This entire structure—that is, the cells and
establish areas that will give rise to specific the hollow cavity they surround—is known by different names, depending
tissues. The animal pole appears denser due
on the species: the blastula in amphibians, the blastocyst in many mam-
to the accumulation of cytoplasmic lipids
dn 2.01/2.01 mals, and the blastodisc in birds, fish, and some mammals. The difference
and granules. This pole will later give rise
to epidermis and neural tissues. The lighter in terminology refers to the morphology of the cells. In birds, for example,
appearing vegetal pole will later give rise to the cells form a disc-like structure that is distinct from the cyst-like mor-
structures associated with the gut.
phology observed in mice. In many cases, the term “blastula” is used as a
generic term for all species.
The amphibian blastula-stage embryo (Figure 2.2A) is spherical,
and like the egg itself, the embryo at this stage is characterized by animal
and vegetal poles. In birds (Figure 2.2B), the blastodisc lies above the
yolk, where it forms two sheets of cells designated the epiblast and
hypoblast—regions that roughly correspond to the animal and vegetal
poles, respectively. The epiblast and hypoblast are also found in mammals,
however the size of the yolk, a source of nutrients for the embryo, is much
greater in birds than in mammals. In fact, in most mammals the size of
the yolk is negligible due to maternal sources of nutrients. Yet, despite
species differences in blastula shape and yolk size, the next step in early
development is comparable across vertebrate species.
node
are not part of the embryo proper, but contribute to the maintenance of the Figure 2.5 Gastrulation in mouse embryos
embryo. Similar to amphibian embryo, a specified group of cells migrates is similar to that in the chick. If the blastocyst
of a mouse embryo is flattened out, the
inward along the midline to form the notochord. As the notochord elongates movements of cells appear similar to those
and the germ layers are established, the primitive streak regresses (Figure of the blastodisc. (A) The blastocyst with part
2.4C, E). At the anterior region of the epiblast, the prechordal plate forms of the posterior region cut away to reveal the
(Figure 2.4A, C, E). This is an area where the surface ectoderm adheres to the orientation of the forming cell layers. If the
dn N2.100/2.05 blastocyst were cut open along the dashed
underlying endoderm. This tight association prevents cells of the notochord
lines and flattened out, the epiblast would
from migrating further anteriorly (Figure 2.4E). The epiblast cells remaining at be on the surface and the migration of cells
the surface form neural ectoderm and epidermal ectoderm. The neural tissue (arrows) would be appear similar to the those
forms as a sheet of cells that arises and extends from the anterior portion of of the chick blastodisc. (B) A sagittal section
through the cup-shaped blastocyst of the
the primitive streak. Like the dorsal blastopore lip, Hensen’s node, a group
mouse embryo reveals the epiblast in the
of cells at the anterior (cephalic) end of the primitive streak, is necessary inner region. The cells of the epiblast migrate
for development of neural ectoderm (Figure 2.4D, E), as is the node, the through the primitive streak that begins at the
equivalent structure in mammals. junction of the extraembryonic and embryonic
regions. The migrating epiblast cells begin to
Gastrulation in mice is a bit more difficult to envision because the
form germ layers between the epiblast and
epiblast is found inside the blastocyst, a cuplike structure (Figure 2.5). If visceral endoderm. The visceral endoderm
one imagines the blastocyst cut open (dashed line, Figure 2.5A) and flat- does not form part of the definitive endoderm
tened out, the similarities between gastrulation in a blastodisc and blasto- of the embryo, but is an extraembryonic
tissue that is replaced by cells that form the
cyst are more apparent. The mouse blastocyst is surrounded by visceral
endoderm layer, similar to the hypoblast in the
endoderm (VE). Similar to cells of the blastodisc, the epiblast cells of the chick. The node is located at the anterior end
blastocyst migrate through the primitive streak to form the mesoderm and of the primitive streak. (C) A section through
endoderm layers between the epiblast and VE (Figure 2.5A, B). The VE does the blastocyst at a later stage of development
not become part of the definitive endoderm and is similar to the hypoblast in reveals the orientation of the neural ectoderm,
epidermal ecdoderm, and notochord. The
that it becomes displaced by the forming endoderm germ layer. As described anterior visceral endoderm underlies the
in Chapter 3, the anterior visceral endoderm (AVE) comes to lie below the anterior portion of the neural tissue. (Adapted
anterior portion of the neural ectoderm and plays a role in defining regions from Nagy A, Gertsenstein M, Vinterstan K &
of neural tissue (Figure 2.5C). Epiblast cells that remain at the inner surface Behringer R [2003] Manipulating the Mouse
Embryo, 3rd ed. Cold Spring Harbor Press.)
of the blastocyst will form either the neural or epidermal ectoderm (Figure
2.5C). As noted above, it is during a specified period in the late gastrula-stage
embryo that ectoderm can give rise to either neural or epidermal tissues.
Precisely how different ectoderm cells are designated to become either neu-
ral or epidermal has been an active area of research for over a century.
began to focus greater effort into identifying the origins of neural tissue,
a groundbreaking discovery was made that indicated specific cells in one
embryonic region can signal, or induce, dorsal ectoderm to become neural.
Many of the first studies of neural induction were conducted using amphibian
embryos, particularly those from salamanders and frogs. Frogs remain a
popular animal model today, in part because of the comparatively large size
of their eggs and early-stage embryos. For example, the frog egg is about
2–3 mm in diameter compared to the 0.1–0.2 mm diameter of a human egg.
This larger size makes cellular regions easier to identify and experimentally
manipulate. Although such manipulations are more easily accomplished with
the larger eggs and embryos of amphibians, early experiments still required
considerable creativity (for example, designing tiny glass needles to use as
surgical knives and using a baby’s hair to separate blastomeres), tremendous
patience, and very steady hands. The technical accomplishments of these
first experiments, now almost a century old, are nearly as impressive as the
scientific hypotheses that resulted from the studies.
A popular experimental method refined in the early twentieth century,
and still used today, relies on grafting tissues from one embryo to another.
This approach has proved critical to advancing our understanding of nervous
system formation. Among the first studies conducted to evaluate neural
specification of embryonic tissues were those in which scientists harvested
tissue from one region of an early gastrula-stage amphibian embryo (the
donor) and grafted it to another region of a second embryo at the same
developmental stage (the host). The host embryo continued to develop
and the effects of the donor and host tissues on subsequent developmental
events were then evaluated. It was one such grafting experiment that first
revealed the source of signals needed to induce neural tissue.
Figure 2.6 The classic grafting experiment
performed by Hans Spemann and Hilde A region of the dorsal blastopore lip organizes the
Mangold. The dorsal region of a blastopore amphibian body axis and induces the formation of
lip from a pigmented donor embryo was neural tissue
grafted onto a nonpigmented host embryo’s
ventral surface, an area of ectoderm that does In 1924 Hans Spemann and Hilde Mangold published what has become
not give rise to neural tissue. As development
proceeded, a neural plate and body axis from one of the most cited studies in developmental neurobiology. In this study,
the host embryo developed along the dorsal the researchers completed grafting studies using two different species of
surface as expected. In addition, a second newts. The pigmentation of the embryos from these two newts differed,
neural plate and body axis formed from the allowing scientists to visualize the fate of donor and host tissues following
ventral tissue of the host. This result indicated
that the donor dorsal blastopore lip did not surgical manipulations. Spemann and Mangold grafted the dorsal
expand to form a new body axis, but instead blastopore lip (DBL) of a pigmented, early gastrula-stage embryo to the
produced signals that induced host ventral ventral side of a nonpigmented embryo (the host) at the same stage of
ectoderm to form an entirely new body axis development (Figure 2.6). The ventral side of the embryo normally gives
complete with neural tissue.
PIGMENTED NONPIGMENTED
DONOR HOST
rise to epidermal but not neural tissue. At this early stage of gastrulation,
however, the regions of epidermal and neural ectoderm have not yet been
specified, so the investigators were able to evaluate any inductive effects
of the DBL. Spemann and Mangold discovered that the host embryos
continued to develop and also formed a second body axis, complete with
neural tissue. The key observation from this experiment was that the
new body axis formed primarily from the nonpigmented, host embryo.
This indicated that the ventral tissue of the host—ectoderm that normally
becomes epidermal—was induced to form neural tissue when provided
with a signal originating in the DBL. Thus, the second body axis did not
result by a simple expansion of the pigmented donor dorsal lip tissue, as
was presumed to be the case based on earlier grafting studies conducted
by other investigators.
The band of DBL that induced the formation of new neural tissue
came to be called Spemann’s organizer because it organized the entire
body axis. Spemann and his students, as well as investigators in many
other labs, continued to explore the mechanisms that governed neural
induction. Spemann ultimately received the Nobel Prize in Physiology or
Medicine in 1935 for his work in this area. Tragically, Hilde Mangold died
following a household explosion in 1924, when she was only 26 years old,
and was unable to witness the continuing impact of her work. Her husband,
Otto Mangold, also a student of Spemann’s, went on to make additional
contributions regarding the mechanisms underlying the processes of cell
determination and induction of embryonic tissues.
The intriguing discovery of a neural inducer originating in the
organizer—that is, the DBL of amphibians as well as its equivalent in other
species, such as Hensen’s node of the chick—led to numerous studies
investigating the nature of this signal. Additional grafting experiments
conducted in the 1930s noted that the signal arising from the organizer was
not species-specific. For example, when grafts of organizer tissue from duck
were transplanted to chick, neural tissues formed. Similarly, when grafts
of chick organizer tissue were transplanted to either duck or rabbit, neural
tissues were induced. Thus, the signal appeared to be universal in its ability
to induce the formation of neural tissue from early-stage ectoderm. Other
grafting experiments in the 1930s revealed that the medial or lateral portions
of the amphibian DBL preferentially gave rise to head or tail structures,
respectively. This suggested the possibility of multiple signals available to
direct the formation of specific neural regions along the anterior–posterior
body axis of the embryo (see Chapter 3).
For almost 100 years, scientists have investigated the signals governing
neural induction, using an ever-expanding array of experimental
approaches. It is hard to capture in just a few paragraphs the extensive
efforts made and the number of scientific debates and alternative
hypotheses put forth during the search for putative neural inducers.
One serious obstacle to identifying neural inducers is the very small
size of the organizer region. The small tissue size prevented scientists
from isolating the signaling molecule directly; to overcome this problem,
researchers screened other tissues for larger and more plentiful sources
of inductive activity, tested other substances for inductive properties, and
developed new ways to determine how the signal reached the ectoderm.
In the course of various studies, scientists determined that the neural
inducer was diffusible and that, surprisingly, any number of biological and
nonbiological substances induced competent undifferentiated ectoderm to
form neural tissue. For example, tissues that were first boiled to denature
Many of the common drinking and baling utensils in the boats are
made from the spathe of the Areka palm; and I have frequently seen
a vessel for holding water made from it, which was not dissimilar to
those made by the Australian natives from the bark of the Eucalypti
trees; they use the flower spathe also for nailing upon the bottoms
of their boats. May, June, and July, are the months for collecting the
nuts. They had loaded nine ships this season; but forty vessels, of all
sizes, have been freighted in one season, for Pinang, &c., from
whence it is exported to China, Madras, and other parts of
continental India.
The nuts vary in size; their quality, however, does not at all
depend upon this property, but upon their internal appearance when
cut, intimating the quantity of astringent matter contained in them.
If the white, or medullary portion, which intersects the red or
astringent part be small, has assumed a bluish tinge, and the
astringent part is very red, the nut is considered of good quality; but
when the medullary portion is in large quantity, the nut is considered
more mature, and not possessing so much astringency, is not
esteemed so valuable.
The quantity of nut produced on this coast is stated to be eighty
thousand peculs. When there is no immediate demand for this
article, it is not shelled, but preserved in the husk, as it is considered
not to be so liable to be destroyed by the worm in that state; but
although this is the opinion of the natives on the coast, yet I have
seen nuts destroyed totally by the worm while in the husk, in the
space of two months. The produce of the first month, or month-and-
a-half, amounting usually to forty thousand peculs, the natives
informed us is exported; and the second gathering, amounting to
about the same quantity, is consumed in the country. The nuts were
brought on board the ship in large boats, (originally built and
employed as fishing vessels, except when required for this
employment, they are from three to four tons burthen each, and are
to be purchased for twenty or twenty-five dollars,) in bulk, and
Manilla mat-bags, and are taken on board the ships in bulk. The
quantity of Areka-nut imported by the Chinese, amounts to forty-five
or forty-eight thousand peculs annually, exclusive of that brought
from Cochin China, the amount of which is not known; in 1832, from
a failure of the usual supply of nuts from Cochin China, forty-eight
thousand peculs, imported from other places, sold so high as four
dollars and three-quarters the pecul; the price it usually fetches in
the China market is from two to three and three-quarter dollars the
pecul. The principal consumption of the nut as a masticatory (in
conjunction with the leaf called betel, produced from a vine, the
Piper betel) is in the provinces of Quang, ton, (Canton, of
Europeans,) Quang, si, and Che, keang, and may be seen, exposed
for sale, on little stalls about the suburbs of Canton, with the other
additional articles used in the preparation; it is also used as a
mordant for coarse dyes. The Areka-nuts brought from Cochin China
are considered by the Chinese the best imported. This may, however,
arise from prejudice in favour of the production of a country so
nearly allied to them, to that introduced by foreigners. In the central
provinces of Hoo, kwang, and Kang, si, the nut is, after being
bruised and pounded, mixed with the green food of horses as a
preventive against a diarrhœa, to which that kind of food sometimes
subjects them. It was likewise mentioned to me by a Chinese, that it
is used as a domestic medicine in the north of China, small pieces
being boiled; the decoction is administered in various visceral
affections.
A cargo of this article generates so much heat as to raise the
thermometer in the hold forty degrees above that on the deck; and
from this circumstance, and the quantity of steam generated, the
crew are prevented from sleeping between decks.
The Areka-nut is commonly known by the very prevailing Malay
name of Pinang, or Pinong, but in the Acheenese language it is
called Pénu, and the tree Ba, penu; Ba, signifying tree, is usually
prefixed to the specific name, as Un, signifying plant, is prefixed to
the name of a plant.
The ripe Areka-nut is called also Pénu, massa, and the green
Pénu, mudr; the Gambir, used with the Betel, Gambé; the Betel-leaf,
Ránu; the Chunam, Gapu; the tobacco, Bákun.
The rajah of Pedir claims ten per cent. as a duty levied in kind
upon all the Areka-nut disposed of to ships arriving in his territory;
and, besides this, his subjects are obliged to dispose of the nuts to
the ship, at the price he or his ministers have agreed upon with the
supercargo.[156]
The red colour, produced by chewing the Betel-leaf, in combination
with the Areka-nut, lime, &c., is not produced by them when used
separately. The mastication of the “Betel” is considered very
wholesome by those who are in the habit of using it: it may be so,
but the black appearance it gives to the teeth, although it is said to
be an excellent preserver of them, together with the brick-red lips
and mouth, give any thing but an agreeable appearance.[157] Its use
certainly does not impart additional beauty to the native females,
who habituate themselves to an equal extent to those of the
opposite sex.[158]
There was an old native of Madras, a Moorman, forming one of
the rajah’s attendants on board, whose duty it was to visit ships, and
report their arrival to his highness, and also to attend the ship daily
to see the cargo taken on board; this individual had one of his hands
rendered useless by a blow from a Klawang, or Malay sword. Besides
the scar resulting from this wound, there was an unreduced
dislocation of the carpal extremity of the ulna, and a fracture of the
radius, which, being disunited, an artificial joint had been formed:
the cause of this personal injury, he said, proceeded from an attack
made upon a vessel he was in, by one belonging to the rajah of
Acheen, in which several people were killed. This individual, being on
board one morning, although professing in external appearances the
Mahometan creed, expressed a desire of having a tumbler of the
stimulating beverage denominated “grog,” if it could be administered
without its being seen; proving that his religious scruples were not
so strong in private as his veneration for public opinion, or a fear of
losing caste. A stiff glass of grog was, therefore, prepared for him,
which the old withered disciple of Mahometanism regarded with
glittering eyes. There was also on board another Mussulman, whose
duty it was to take account of the cargo as it came to the ship, and
report the quantity to the rajah; the sinner was about to raise the
glass to his mouth, exclaiming, “What would the other man say if he
was to see me now?” when the old saying was verified, of “there is
many a slip between the cup and the lip;” for the scribe was, at the
same instant, seen descending, and there was only time to conceal
the glass before he was close to him. The old fellow stroked his
whiskers, and began seriously to talk about opium; and as the white
turbaned man saw him clear out from below, the long-sought
enjoyment was obliged to be postponed.
A Chittagong brig, commanded by a black Portuguese, anchored in
the roads, on the 10th of July, from the Maldive islands, bound to
Penang, with a cargo of dried fish and some tortoiseshell, which had
been procured in exchange for rice; his object was to dispose of his
cargo in exchange for dollars and Betel-nut at this place. The dried
fish was the Bonito cut into small pieces. The Maldive natives
prepare it in the following manner:—A long slice is cut from each
side of the fish, and these again are divided into two parts, so that
each fish is divided into four pieces; it is then boiled for a short time
in salt water, after which it is smoked and placed in the sun to dry; it
then becomes extremely hard, and resembles, when broken, a piece
of wood, having a reddish appearance at the fractured parts: after it
has been soaked, it is used for curries and other native dishes.
The “Golden Mountain” is a very conspicuous and beautiful object
from the anchorage; but it ought to be mentioned, that, from this
position, two mountains are seen to the westward, one towering to
a peak, and densely wooded, the other, anterior to it, is a lofty
rounded hill: the first is the one known to Europeans as the “Golden
Mountain;” the second, or rounded mountain, is not named in the
charts, but it may be called the “Pedir Mountain.” The “Golden
Mountain” is called by the natives Yamori, and the other Yamora; the
first the natives designate as the father, the second the mother
(probably of all the little mountains about them).
The natives state, that once every year the mountains come
together, occasioning rain, thunder, lightning, earthquakes, and
violent storms; the Urong Salle, or Fire King, then sits upon the
mountain, surrounded by hideous demons, enjoying the noise and
uproar occasioned by the conflict of the elements; the winds blow in
violent tornados; the thunder is so loud as to occasion the earth to
tremble under the feet of the terrified inhabitants: the rain causes
tremendous mountain torrents, inundating habitations and
plantations, carrying all before them in their impetuous course, and
spreading devastation around. In the midst of this dreadful conflict
of the elements, the mountains meet with a horrible crash. As the
forked lightning plays around them, the Urong Salle, or Fire King,
surrounded by his satellites, laughs and sports in the scene; the
mountains remain united for a minute, when they again separate,
regaining their former position. No person dare ascend the hill at any
time, for there sits the Fire King and his demons, and should any
mortal cast his eyes upon him, that instant he would be struck with
blindness.
Yamora is stated to be distant, inland from Pedir, two days’
journey travelling on foot, and Yamori is the same distance from the
other mountain; not, however, as the crow flies, but it would take
that period of time to reach it, from the winding and difficulties of
the road. From this account there is every reason to suppose that
earthquakes and volcanic eruptions are occasionally felt upon this
coast. As far as we could ascertain, there was no appearance of a
burning volcano existing in either of the mountains just mentioned;
they were both densely clothed with vegetation, more especially the
“Golden Mountain.”
Near the banks of the river, a short distance up, is an uninclosed
native burial-ground; the graves had a stone or piece of wood
placed both at the head and foot: there were several trees of
Hibiscus tiliaceus, Tamarindus Indica, and a very large one, called
Ba, Glumpong by the natives, (Sterculia fœtida, Linn.) which was
described by them as being poisonous, producing violent vomiting
and pains in the head, if the fruit be eaten. I subsequently saw it,
planted about the fences in the village. There were two of these
fine, lofty, and spreading trees in the burial-ground, and I procured
specimens both of the flowers and fruit: the former grew in clusters
upon erect spikes, with the corolla of a dark red, mixed with
yellowish green. They have a handsome appearance, but diffuse so
fœtid a smell around, as soon to fill a room with the exceedingly
disagreeable effluvia. The fruit is kidney-shaped; the trees were sixty
or seventy feet in height, and from eight to ten feet in
circumference.
A piece of sandal wood, of good quality, was brought off to the
ship by one of the natives; he stated that large quantities of it could
be procured, as the tree grew abundantly in the mountains. He gave
it the usual Indian appellation of Chandana.[159]
In some brackish pools I collected several small living species of
the Cerethium; and about the banks a great number of a small crab,
remarkable from one of the claws being greatly disproportioned to
the size of the other parts of the animal, and entirely different in
colour. When I first beheld them, I mistook them for small crabs
running away with the claws of larger ones. They are difficult to
catch, from the exceeding rapidity of their motions, and escape, on
the slightest movement or noise being made, into their
subterraneous dwellings in the sand. The body and feet of the
animal are bluish black, with a few white marks across, and the
large claw is of a light or occasional darker red colour. The natives
call them Biong, po. They are seen in great numbers about the
pools, but are not eaten by the natives. I procured several
specimens, which I preserved in spirits. On being placed in strong
rum, they survived for the space of full three minutes; and if more
than one was placed in the same bottle, they would fight and pull
the claws off each other in their death agonies.
Near the village, several boys were playing a game with Areka-
nuts, called Mein-achu, in some degree resembling our game at
marbles. Four nuts were piled up in form of a pyramid, twelve such
forming a row; a nut was then fillipped off with some degree of
force against the heaps, from a distance of about three yards. If the
thrower succeeds in destroying one of the pyramids, he renews his
throw at the others, always at the distance where his nut remained,
until he misses, when the next player takes his turn: the game thus
continuing until all the pyramids are thrown down.
I was much surprised a few days since, while passing a house in
the vicinity of the village, to see apparently a European lad, of about
six years of age; and on examining him closer, found his skin of a
white colour, thinly scattered over with small light-brown patches.
On passing the same house again, I made inquiry on the subject,
and then had an opportunity of seeing two others, who were
females,—one about sixteen or eighteen years of age, the other an
infant just able to run about. They were described to us as children
of native Malay parents, of the usual colour of their race; but we did
not see them, as they had gone a short distance into the country.
The children were named Ceté, Theté, and Cebreté. They had a
plump appearance; flaxen hair, light-blue eyes; and the boy and
young woman were slightly covered with scattered small brown
patches; but the infant had not a blemish on its integument. The
natives could give no reason for this variety; they looked upon it as
curious, but did not seem, as far as I could ascertain, to regard it as
a disease. They have the flat nose of the Malay, but otherwise would
be considered the offspring of European parents, the skin being in
some degree freckled. It ought certainly to be regarded as a variety
of, if not actually the disease called, leprosy.[160]
I met several natives going into the interior; they were all well
armed with krisses, klawangs or Malay swords, spears, and
blunderbusses or musquets; the country in the interior being
described as in a very unsettled state. Some of the spears were
about six feet long, resembling walking-staves, covered above by a
wooden sheath, similar to the other part of the weapon, and
ornamented with rims of silver; the upper part, or sheath, being
taken off, displays the head of the spear.
I purchased a specimen of the Viverra musanga, similar to one I
had before procured at Java, for half a rupee; although very wild
with strangers, it was exceedingly domesticated with its master,
following him like a cat, as he walked along the path: they called
him, on this coast, as at Java, “Mussang.”
This specimen was very little larger than one I had before
procured; but they attain, I was informed, the size of our domestic
cat, living, in the wild state, upon the summits of the trees, eating
fruit, and catching birds as their food. The animal is very fond of
sugar-cane, plantain, rice, and the flesh of fowls, and will also kill
and eat those troublesome insects, the cock-roaches. It, however,
became so very savage on board, that I was obliged at last to
destroy it.
I was frequently applied to by the natives, when sick, to
administer medicines to them. There were several suffering from
different kinds of tumours; one, near the nose, I offered to remove;
but although the person promised to come on board for the
purpose, I afterwards heard he was afraid, and altered his mind.
Among many patients was a little girl, belonging to a Moorman,
suffering from Diarrhœa mucosa: her body had been rubbed entirely
over with a mixture of turmeric, sandal-wood, and oil, as a remedy
for the disease. The yellow appearance—the usual indication of
sickness—was not the result, as may have been expected, of some
disease, but merely a daubing over the body of the above-
mentioned composition,—this being the remedy for all diseases. The
common Hindoo application of cow-dung and turmeric is frequent for
external wounds or bruises, and considered a very efficacious
remedy. Cutaneous diseases were very numerous, and the native
applications proved very inefficacious in removing them.
I had an opportunity of seeing another rajah—the rajah of Putu (a
village and district not far distant, on the sea coast). He was ill-
looking in person, and carried with him the appearance of being
addicted to opium-smoking. He was attired in a sarong of a
handsome pattern, the borders of which were woven with gold
threads. These sarongs are the manufacture of the country, and are
sold at high prices. The rajah was tall and young, and was attended
by a numerous retinue, attired in red cloth jackets ornamented with
gold lace, and handsome sarongs: others could only wear a cotton
baju, or jacket. They were armed with spears, klawangs, krisses,
and old rusty blunderbusses. The object of his visit to this place, was
to pay his respects to the old queen (grandmother of the present
rajah) of Acheen, who was residing at Pedir, and was about to
embark in a few days in the Acheenese grab for Acheen, and was
described as being an excellent old lady.
NOTE.
(See page 13, vol. i.)
A method has since been mentioned to me, by which the colours
of the flowers of plants are well preserved. The process was this:—
The paper being first heated before the fire, or in an oven, the plant
recently gathered is placed between the hot sheets, and pressed. It
is requisite, however, that the paper, in the same heated state, be
renewed at intervals, on account of the expressed juices from the
stalks and leaves fermenting, which might otherwise injure the
plants.
There is also a method of preserving plants in flower, by which
their natural form, as well as colours, can be preserved. It consists in
placing the plant in a jar, and pouring fine sand upon it, until the
whole plant is covered: it is then to be placed, still kept in the jar,
into an oven; after which, being taken out, and the sand removed,
the plant is found preserved both in its form and colour.
FOOTNOTES
[1] Madeira signifies, in the Portuguese language, “woody;”
and the island was so named from the very wooded appearance it
had on its discovery.
[2] In summer, Horsburgh states that the north-east winds
prevail, and a south-west current sets through the channel,
between Madeira and the Desertas. The current along the south
side of Madeira and the Desertas mostly sets to the leeward in
strong gales; but at the conclusion of a gale, it sometimes
changes suddenly, and sets contrary to the wind.
[3] They are called “Guinea Ships” by the old navigators, from
their floating like a vessel on the water, and from having very
probably been first seen in great numbers about the coast and
gulf of Guinea.
[4] Mr. John Fuge, of Plymouth, informed me that he captured
a specimen of the Physalia pelagica, in the Catwater, (Plymouth
Sound,) a few years since, in the month of August; it was floating
upon the surface of the water, and living when caught; he placed
it in a glass globe of sea water, and preserved it for three weeks.
The only motion he observed in the animal, was an occasional
contraction and elongation of the beaked end of the bladder
portion of the animal, and the tentaculæ were also drawn up and
thrust forward.
[5] Physalis tuberculosa, P. megalista, P. elongata, and P.
pelagica, are the species given by Lamarck. (Sur les Animaux
sans Vertèbres, tom. ii. p. 478.)
[6] On the 5th of April, 1834, in latitude 29° 17′ north, and
longitude 42° 57′ west, temperature of the atmosphere 68° to
72°, I caught in my towing net a very fine specimen of Physalis
pelagica, adorned with the usual beautiful tints, but not so vivid
as I have usually seen them. The specimen was the largest I had
before witnessed. During the month of April, 1834, I observed
specimens of this mollusca as far north as latitude 38° 32′ north,
and longitude 34° 30′ west. The lowest range of the thermometer
being 58°, and highest 72°. In March, 1831, I had seen them as
far north as the latitude of the Azores or Western Islands. Often
when we had very strong westerly winds, with a heavy sea
running at the time, I saw them; yet not, to use a nautical
expression, “furling sail” and sinking; this was sufficient to prove
the absurdity of the opinion that they collapse and sink during
stormy breezes. I have frequently seen them capsized by a wave,
but almost instantly after regain their natural position.
[7] “Praya” signifies, in the Portuguese language, “a beach or
shore.”
[8] “The largest tree in the world is the Adansonia or Baobab
tree, the trunk of which has been found with a diameter of thirty
feet; but its height is not in proportion. It is emollient and
mucilaginous in all its parts. The leaves dried and reduced to
powder constitute Lalo, a favourite article with the Africans, which
they mix daily with their food, for the purpose of diminishing the
excessive perspiration to which they are subject in those climates;
and even Europeans find it serviceable in cases of diarrhœa,
fevers, and other maladies. The fruit is, perhaps, the most useful
part of the tree. Its pulp is slightly acid and agreeable, and
frequently eaten; while the juice is expressed from it, mixed with
sugar, and constitutes a drink which is valued as a specific in
putrid and pestilential fevers.”—Hooker’s Bot. Mag. 2792.
“The dried pulp is mixed with water, and administered in Egypt
in dysentery. It is chiefly composed of a gum, like gum senegal, a
sugary matter, starch, and an acid, which appears to be malic.”—
Delile Cent. 12. Quoted in Lindley’s Int. to the Nat. Syst. of
Botany.
[9] (In June, 1831.) “Canary orchilla fetches in the London
market from 270l. to 290l. per ton, while that which is brought
from Madeira fetches only 140l., and Barbary not more than from
30l. to 45l. The total quantity imported in 1829, amounted to
1,813 cwt. or 90½ tons.”—“Archil is generally sold in the form of
cakes, but sometimes in that of moist pulp.”—M’Culloch’s Dict. of
Commerce.
[10] At the time of our arrival a Portuguese brig was lying in
the bay, having a cargo of this weed on board, which was
estimated at a low calculation to be worth 30,000l.
[11] “The dyer’s lichen was first exported from the islands of
the Archipelago to Venice, Genoa, France, and England, for the
use of the dyers. Towards the commencement of the last century
it was discovered in the Canary Islands, and was soon placed
among the regalia of the Spanish crown. This excited the
attention of the Portuguese, who collected it without restriction in
the Cape de Verd Islands, Madeira, Porto Santo, and the Azores.
In the year 1730, the Jesuits asked of King John V. the privilege
of collecting the Hervinha secca; but the crown took the
advantage into its own hands, and farmed the right of collecting
it. At a later period the lichen was ceded to the mercantile
company of Gram Pará and Maranhâo; and, lastly, in the year
1790, the government again took this branch of commerce under
its own care, because it had declined considerably under the bad
management of the company. At present the exportation is small;
but more considerable, however, from the Cape de Verd Isles.”
(See I. Da Silva Feijó, in the Memorias Economicas da Acad. de
Lisboa, vol. v. 1815, p. 143.)—Spix and Martius Travels in Brazil,
vol. i. p. 125.
[12] Abel’s Voyage to, and journey into the interior of, China.
4to. p. 6.
[13] Captain Basil Hall. See Fragments of Voyages and Travels.
[14] It would be interesting, but at the same time difficult, to
ascertain where one particular species commences and another
terminates, and the extent of their range. In the summer season
they are found off the Cape of Good Hope, Port Jackson, and
even on the banks of Newfoundland; and I have good authority
for asserting that in the month of August, in even more than one
year, they have been seen in Plymouth Sound.
[15] My journal remarks the atmosphere to have been very
chilly during the day, but much milder in the evening; the range
of the thermometer during the day being from 49° to 56°.
[16] How will this accord with the geographical distribution of
the mollusca by Péron and Leseur? After studying the Holothuria
Medusæ, and other congeners of delicate and changeable forms,
they came to the conclusion that each kind has its place of
residence determined by the temperature necessary to support its
existence. Thus, for example, they found the abode of Pyrosoma
atlanticum to be confined to one particular region of the Atlantic
Ocean.—Voy. aux Terres Aust. tom. 1, p. 492, quoted in Lyell’s
Principles of Geology, vol. ii. pp. 111, 112.
[17] Albicores, bonitos, and dolphins, often follow the ship for
several days in succession; we had occasion to note an albicore
that was marked on the back by some sharp instrument, leaving
a large sear by which it could readily be recognized. It was first
seen in 3° north latitude, and following the ship to latitude 11°
south, a distance of eight hundred and forty miles.
[18] This petrel is said to be found from 24° to 60° south
latitude.
[19] Respecting the name given to this bird, it has been
observed, that the first Portuguese navigator called them, the
boobies, and other sea-birds, alcatros or alcatras. Dampier
applied this name to an actual kind; Grew changed it to albitross,
and Edwards into albatross. The French name these birds mouton
du cap. There are a number of species enumerated; but it will
require frequent and cautious observation previous to the
determination of a new one, as they vary so much in plumage
from sex and age.
[20] The condor is supposed by some to be the “Roc” of the
Arabian Nights.
[21] The other species I have seldom known to measure more
than eight feet across the expanded wings.
[22] This bird is evidently aided by its long wings as well as tail
in directing its flight: they are never seen to soar to any great
height, and are often observed to change their course, by turning
the wings and body in a lateral direction, and oftentimes, when
raising themselves, would bend the last joint of the wings
downwards.
[23] Cuvier enumerates five species; but at the same time
says, “On a observé divers albatrosses plus ou moins bruns ou
noirâtres, mais on n’a pu encore constater jusqu’à quel point ils
forment des variétés ou des espèces distinctes.”—Regne Animal,
tom. i. p. 555.
[24] The building was originally erected as a theatre, at a very
great expense, and after its completion the governor, at that time
General Darling, refused to grant a licence for dramatic
performances, in consequence of which it was fitted up as a
spacious hotel. On the present Governor, General Burke, granting
permission for theatrical entertainments, a portion of the building
has reverted to the original purpose for which the whole had
been erected.
[25] “It is at least certain that on this microscopic character of
the equal existence of cutaneous glands on both surfaces of the
leaf, depends that want of lustre which is so remarkable in the
forests of New Holland.”—Sketch of the Botany of the Vicinity of
Swan River, by R. Brown, Esq. F.R.S., published in the Journal of
the Royal Geographical Society of London, vol. i. 1830, 1831.
[26] The dried cones of the Banksia are used by the aborigines
for retaining fire, as they will keep ignited for a considerable
length of time.
[27] The analysis of the chemical properties of this gum is
mentioned in Decandolle’s Organographie Végétale, tom i.
[28] I remarked that the wood of a species of Banksia, (I
believe dentata,) which was used for firewood, was of a beautiful
red colour, and when split in a longitudinal direction displayed a
curious interlaced appearance; it had an astringent taste when
chewed, staining the saliva of a dark reddish colour, and I think it
would be worth trying if a dye would be furnished by it.
[29] The Kennedia is called the “woodbine” by some of the
shepherds in the colony, who use a decoction of its leaves as a
lotion for scabby sheep, and they declare it is a cure for that
disease; but their declarations of the curative properties of the
plant is not borne out by the experience of others, who have
found it quite useless as a remedy for that disease.
[30] Among the Psittaceæ tribe is the Psittacus Novæ
Hollandiæ, curious as being one of the parrot tribe, seen and
mentioned by Captain Cook, but is a very rare species in the
present known parts of the colony,—(it is, more correctly, a
species of cockatoo, and which, I believe, Mr. Vigors has; or
intends, to place in a new genus,)—and has not been seen even
in those portions of the colony visited by Cook. The specimen in
the collection, is one among a few of this species that was seen
at Wellington Valley a few years since, during a prevailing
drought, and since that period they have not been seen in that or
any other known part of the colony. I heard at Yas Plains, that it
was not uncommon at some seasons of the year to observe birds,
before unknown to the colonists, appear, and soon after again
disappear, and are, perhaps, never seen again until years after,
and often not at all.
[31] It would also be desirable to have the cases made in such
a manner, as to be opened if required, and a closer inspection of
the specimens obtained, which is often requisite for scientific
examinations. To George Macleay, Esq. the museum is indebted
for many valuable species of birds, which he had collected during
his arduous journey in the exploration of the course of the
Murrumbidge river, in the expedition under Captain Sturt.
[32] Captain Cook observes, “Of this plant, there are two sorts;
the leaves of both resemble those of flags, but the flowers are
smaller, and their clusters more numerous: in one kind, they are
yellow; and in the other, a deep red.” This plant is also indigenous
to Norfolk Island, which, in its vegetation, partakes more of New
Zealand than the Australian continent. Captain Cook observes,
that at Norfolk Island, “we observed many trees and plants,
common at New Zealand, and, in particular, the flax plant, which
is rather more luxuriant here than in any part of the country.”
[33] Captain George Harris, R. N., C. B., and member for
Grimsby, in the present parliament, has recently been
manufacturing rope and cables of the phormium tenax, or New
Zealand flax; and instead of tar, substitutes a solution of gum, or
some such substance, (principally, we suspect, the caoutchouc or
Indian rubber,) by which, it is contended, the rope is rendered
stronger, more pliant, and less liable to part in short bends, turns,
or clinches, and being stronger, smaller ropes than those now in
use will answer for ships’ rigging; the consumption of hemp, of
course, diminishes in proportion—we say hemp, because the
solution will also impart to the hemp the qualities we have
named. If, however, a substitute is to be found for hemp and tar,
we are rendered independent of the Russian trade in these
articles;—a most desirable object, should the state of Europe at
any time involve us in a difference with that nation. The bogs and
rough ground of Ireland, all our African possessions and West
Indian islands, and New South Wales, are particularly adapted to
the culture of the phormium tenax. Captain Harris was here on
Monday, and superintended the making of a 14½ inch cable,
which is to be tried on his Majesty’s ship Rainbow. A trial is also
to be made of the relative strength of the phormium tenax and
hemp in this yard, in a few days, for which a piece of 14½ inch
cable has been expressly manufactured. The price of hemp per
ton is £38; that of the phormium tenax £28. Of the experiments
that have been made at Woolwich, by order of the Admiralty, the
following are the results:—
T. cwt. lbs.
A 4½ inch rope of the old sort broke at a strain 3 8 40
of
4 inch phormium, with the solution 5 10 0
4 inch bolt rope, Italian yarns, present sort 4 15 0
4 inch ditto, with the same yarns, with the 6 8 56
preserving solution
4 inch common rope 5 7 56
4 inch hempen rope, with coal or mineral tar 3 7 56
4 inch phormium, with the solution 5 16 70
Feet. Inch.
From the vertex of the head to the tip of the tail 2 3
Breadth across the shoulders 0 3
Length of the tail 0 11½
Breadth of the loins 0 3²⁄₈
Length of the fore-leg to the claws 0 6⅝
hind-leg to do. 0 7⅜
Length of the head to the snout 0 4
Length of the ear 0 2½