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DONG KEE YI
GEORGIA C. PAPAEFTHYMIOU
NANOBIOMATERIALS
DEVELOPMENT AND APPLICATIONS
Advances in Materials Science and Engineering
Series Editor
Sam Zhang
DONG KEE YI
GEORGIA C. PAPAEFTHYMIOU
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v
© 2010 Taylor & Francis Group, LLC
vi Contents
Sam Zhang
vii
© 2010 Taylor & Francis Group, LLC
Preface
Nanobiotechnology is a recently activated term describing the convergence of
molecular biology and engineering. The combination of these disciplines over
the last decade has realized a new class of smart devices or systems for biological
and chemical analysis defined by improved specificity and sensitivity as well as
higher rates of molecular recognition compared with previous solutions. Advances
have been made in nanobiochip materials, biomimetic materials, nanocomposite
materials, interface biomaterials, photocatalytic materials, nanomotors, nanobio-
sensors, and nano drug delivery systems, with enormous prospect in industrial,
defense, and medical applications of great societal impact. Such technological
advances are the direct outcome of the continuous exchange of ideas, which is
taking place across the border between the biological and physical sciences in
many areas of nanoscience. This interdisciplinary exchange is based on the premise
that nanotechnology offers biology new tools, while biology offers nanotechnology
new types of functional materials. The ability to observe intracellular structures
with high selectivity and follow their dynamic behavior is the greatest challenge of
biology to nanoscience that drives the nanotechnological development of a variety
of bioimaging probes. Understanding the rotatory flagellar motor of bacteria and
adapting it to biotechnological needs is another challenge. Nanotechnology makes
use of biomimetic or bio-inspired processes for the production of nanosized materi-
als for applications not only in biology but also in a variety of seemingly unrelated
fields including nanoelectronics. On the other hand, the fruits of nanotechnology
are increasingly being applied to expanding areas of biomedical and therapeutic
processes. Nanotechnology is affording biomedicine new nanostructures and scaf-
folds for tissue engineering, nanoparticle probes for magnetic resonance imaging
(MRI), targeted drug delivery and hyperthermia cancer therapy, photonic band
structures, new optical imaging probes, and carbon nanotube–based technologi-
cal advances for drug and gene delivery, to name a few. Thus, nanobiotechnology
constitutes “a bridge between nano and bio,” with nanoscale materials providing the
building blocks for the construction of the “bridge.”
The present volume of the Advances in Materials Science and Engineering series
provides an update on developments, and new findings and applications on many of
the topics mentioned above that comprise active areas of multidisciplinary bionano-
materials research. It presents 12 chapters contributed by an international team of
investigators, who are actively engaged in the forefront of research in their respec-
tive disciplines. These 12 chapters fall under 4 broad themes, and thus the book is
internally organized into 4 parts: Part I, “Nanomaterials in Nanobiotechnologies:
Preparation, Characterization, and Applications”; Part II, “Soft Block
Nanobuilding: New Preparation Routes of Soft Nanomaterials Using Biomolecules”;
Part III, “Nanomaterials and Bio-MEMS: Nano- and Microscale Hybridization of
Materials and Applications”; and Part IV, “Nanotoxicity Studies and Applications
in Eco-Biosystems.” Potential readers who will benefit from this volume include
ix
© 2010 Taylor & Francis Group, LLC
x Preface
Dong Kee Yi
Department of Bionanotechnology
Gachon University
Sungnam City, Republic of Korea
Georgia C. Papaefthymiou
Department of Physics
Villanova University
Villanova, Pennsylvania
xiii
© 2010 Taylor & Francis Group, LLC
xiv Contributors
Danai Tsitrouli
Institute of Advanced Materials,
Physicochemical Processes,
Nanotechnology & Microsystems
National Centre for Scientific Research
“Demokritos”
Attiki, Greece
xvii
© 2010 Taylor & Francis Group, LLC
Part I
Nanomaterials in
Nanobiotechnologies:
Preparation, Characterization,
and Applications
Eamonn Devlin
National Center of Scientific Research “Demokritos”
CONTENTS
1.1 Introduction....................................................................................................... 3
1.2 Biomineralization of Iron in Biological Processes............................................ 4
1.2.1 Ferrihydrite Grown within Apoferritin.................................................4
1.2.1.1 The Challenge of Nanoparticle Nucleation and Growth........5
1.2.1.2 Particle Nucleation and Growth in the Ferritins..................... 6
1.2.2 Magnetite Grown within Membrane Vesicles.......................................8
1.3 Biomimetic Magnetic Nanoparticles............................................................... 10
1.3.1 Ferrite Nanoparticles Grown within Block Copolymer
Nanoreactors.......................................................................................11
1.3.2 Preparation of Magnetic Nanoparticles Using Microemulsions......... 13
1.3.3 Magnetic Nanoparticles Grown within Protein Cages........................ 15
1.3.4 Magnetic Nanoparticles Grown within Viral Capsids........................20
1.3.5 Maghemite Core/Silica Shell Nanoarchitectures................................ 22
1.4 Magnetic Characterization of Iron-Based Magnetic Nanoparticles................24
1.4.1 Isolated Magnetic Nanoparticles.........................................................26
1.4.2 Interacting Magnetic Nanoparticles.................................................... 31
1.5 Conclusion....................................................................................................... 36
Acknowledgments..................................................................................................... 37
References................................................................................................................. 37
1.1 INTRODUCTION
Materials science explores the relationship between the structure and properties
of materials. Borrowing techniques and practices from solid-state chemistry and
physics for the synthesis and characterization of materials, it has developed as a
separate scientific area. Originally, it had no affinity with biology, but the advent and
integration of nanoscience and nanotechnology into materials science has changed
this dramatically [1,2]. Nanotechnology deals with the manipulation of matter at the
atomic and molecular levels for the bottom-up synthesis of materials. The synthesis
3
© 2010 Taylor & Francis Group, LLC
4 Nanobiomaterials: Development and Applications
Iron stored
as mineral
inside ferritin
FIGURE 1.1 Ribbon representation of the ferritin molecule. A polymeric shell consisting of
24 polypeptide subunits encapsulates a particle of biomineralized ferrihydrite. Shell dimen-
sions: inner diameter 7 nm; outer diameter 12 nm.
Interfacial energy
rthermo
rkin
Particle radius
FIGURE 1.2 Particle nucleation and growth: change in volume, surface, and total Gibbs
free energy, ΔG, as a function of particle radius. The kinetic and thermodynamic critical radii
are indicated.
The first term gives the energy gained in creating the volume of the particle, thus this
is the term that drives nucleation, while the second term gives the energy lost due to
surface tension at the interface, and thus is the term that hinders nucleation. Figure 1.2
gives a sketch of the dependence of various terms on r.
For very small particles, ΔG is positive, due to the high surface-area-to-volume
ratio, making nucleation thermodynamically unfavorable. The graph of ΔG as a
function of r reaches a maximum when d ( DG ) dr = 0. The maximum occurs at
2DGs
rkin = , (1.2)
DGv
which defines the kinetic critical radius for nucleation. For r > rkin , further growth of
the nucleated cluster is kinetically favored as ΔG decreases with increasing particle
size. The radius rthermo above which ΔG becomes negative defines the thermodynamic
critical radius. The particle, once nucleated, is thermodynamically driven to continu-
ous growth and the formation of bulk material. Surface passivation with terminal
ligation is needed to arrest the growth at the nanoscale.
In heterogeneous nucleation, the positive energy associated with surface tension at
phase boundaries is greatly reduced since the presence of nucleation sites eliminates
the particle/solution interface in the process of particle nucleation. Thus, e nergetic
considerations for heterogeneous nucleation are less demanding, and nucleation can
be more readily initiated.
the interior of the protein rather than in the bulk solution. This is achieved by the
presence of negatively charged glutamic acid residues, the nucleation sites, which
line the interior wall of apoferritin with COO− ions that attract Fe2+ ions and lead to
double-layer formation with an increased density of iron ions at the interior protein
surface [15]. The molecular cage also functions as a catalyst for the oxidation of
Fe2+ → Fe3+ at a binuclear iron-binding site known as the ferroxidase center [16],
using O2 or H2O2 as the oxidant [17], and induces the hydrolytic polymerization of
iron to form the ferrihydrite core, according to reactions as follows:
2.51 Å
2.25 Å 1.481 Å
1.98 Å 1.73 Å
3.3–3.2 Å
4.5 Å 2.59 Å
(a)
1.49 Å
(b)
15 23 31 39 47 55 63 2θ°
FIGURE 1.3 Six-line (a) and two-line (b) ferrihydrite XRD patterns, CuKα radiation.
(Reproduced with kind permission of the Mineralogical Society of Great Britain and Ireland from
the paper by Drits, V. A., et al., Structural model for ferrihydrite, Clay Miner., 28, 185–207, 1993.)
40 nm
FIGURE 1.4 TEM micrograph of native in vivo produced HoSF ferritin. (Sample purchased
from Sigma-Aldrich.)
precipitation and tooth formation [22] proceed through the biochemically controlled
reduction of ferrihydrite. The mineral hardens the major lateral teeth of chitons,
enabling them to scrape surface and embedded algae from hard marine rocks
for food. Unlike ferrihydrite, which is a common product of both biological and
inorganic processes, magnetite is naturally formed inorganically only at elevated
temperatures and pressures in igneous and metamorphic rocks. Yet, organisms
ranging from bacteria to vertebrates are capable of forming magnetite under ambi-
ent c onditions. By natural selection, the chitons have found a route to biochemically
mediate the transformation of ferrihydrite to magnetite at atmospheric temperatures
and pressures. Biological magnetite deposits have also been identified with another
entirely different biological function, “magnetoreception,” which is the ability of
living organisms to sense the polarity and inclination of the Earth’s magnetic field
[23]. Some bacteria, honey bees, homing pigeons, and migratory fish are known to
possess this sense.
Magnetotactic bacteria [7,8] synthesize membrane-enclosed intracellular crys-
talline MPs, called magnetosomes, comprised primarily of iron oxides or, in rare
cases, iron sulfides. Magnetosomes are nanometer-sized, magnetic mineral crystal
deposits enveloped by a stable membrane that contains some lipids and proteins,
often referred to as the membrane vesicle. They are aligned to form chains within
the bacterium, creating a biomagnetic compass that enables the bacterium to orient
in the Earth’s magnetic field, a phenomenon known as “magnetotaxis.” These are
microaerobic bacteria, endowed with flagella that allow them to swim and migrate
along oxygen gradients in aquatic environments. They were first reported in 1975
by the microbiologist Richard P. Blakemore [24]. Studies have revealed that mag-
netic bacteria tightly control the synthesis of their own magnetite, mediated by the
magnetosome membrane that has a distinct biochemical composition and contains
specific magnetosome membrane proteins (MMPs) [25,26]. Since 1975, a variety
of strains have been found to exist in marine and freshwater habitats. Figure 1.5
shows TEM micrographs of magnetosomes and bacteria representing three dif-
ferent strains of typical magnetotactic bacteria. Note that magnetosomes can be
isolated from bacteria with intact magnetosome membranes surrounding the MPs,
as indicated in Figure 1.5c, where the magnetosome membranes, indicated by the
arrow, are clearly visible.
Detailed studies of the crystal structure of the magnetite particles within the mag-
netosomes indicate that they contain highly crystalline magnetite nanoparticles of
cubo-octahedral shape, yielding superior magnetic properties. Overall, magnetosome
crystals have high chemical purity, narrow size distribution, and species-specific mor-
phologies, unattainable in inorganically precipitated magnetite. These features point
to magnetosome formation under strict biological control [25], a process known as
“biologically controlled mineralization.”
The archetypical core/shell architectural model of the ferritin molecule and bacte-
rial magnetosomes is presently widely being used in materials science in bio-inspired
routes for the formation and application of magnetic nanoparticles. Recent efforts
focus on the use of protein cages and viral capsids as space-confined reaction ves-
icles for the formation of magnetic nanoparticles, but various other polymeric and
inorganic shells are also being explored in core/shell nanoarchitectures. In the case of
(a) (b)
0.25 μm
0.5 μm
MM
(c)
100 nm
magnetic nanoparticles, the shell carries out the additional function of steric isolation
of the magnetic nanoparticles to minimize magnetic interactions between particles
and thus prevent particle agglomeration, an important issue in ferrofluid preparations
for biomedical applications [27].
1.3.1
Ferrite Nanoparticles Grown within
Block Copolymer Nanoreactors
The rich magnetic behavior of spinel ferrites stems from the presence of two
magnetic sublattices that originate from the magnetic interaction between cations,
with magnetic moments situated in tetrahedral and octahedral coordination sites,
strongly exchange-coupled to produce ferrimagnetic ground states. Theoretically,
they can be obtained from magnetite Fe3O4 by the substitution of Fe2+ by another
transition metal. Solid solutions of the form TxFe3–xO4 (where T = Cu2+, Co2+, Mg2+,
Zn2+, Ni2+, etc.) can be prepared [28,29]. Such substitutions into the parent structure
of Fe3O4 modify the incipient magnetic exchange interactions between and within
sublattices and, therefore, the overall magnetic behavior of the system. Microphase
separation of diblock copolymers results in heterogeneous structures with lamel-
lar, cylindrical, or spherical microdomains, as shown in Figure 1.6 [30,31]. These
microdomains can serve as nanoreactors, or space-constrained reaction vesicles,
analogous to protein cages and membrane vesicles, for the nucleation and growth of
magnetic nanoparticles.
Figure 1.7 shows a schematic diagram of CoFe2O4 nanoparticle formation by
self-assembly within a diblock copolymer matrix consisting of polynorbornene
(NOR) and polynorbornene-dicarboxylic acid (NORCOOH), with a repeat unit ratio
of 400/50, synthesized using ring-opening metathesis polymerization (ROMP) [32].
FeCl3 and CoCl2 were used as precursors (polymer:FeCl3:CoCl2 = 1:25.0:12.5 mol).
The metal salts were introduced while the polymer was in solution, before the micro-
phase separation of the two blocks could occur. Rapid diffusion and attachment
of the metal salts to the polymer, due to their high affinity for the COOH groups,
resulted in the dispersion of the metal salts within the copolymer matrix [28].
A solid film was subsequently formed via static casting over a period of 3 days.
The films were then washed with NaOH and H2O. The FeCl3 and CoCl2 salts reacted
with NaOH and water within the NORCOOH nanoreactors. As a result, CoFe2O4
nanocrystals were formed within the self-assembled NORCOOH nanospheres of the
diblock copolymer matrix. Figure 1.8 shows the TEM micrograph of the resulting
Cl−
Fe3+
Microphase
COOH FeCl3 COO− + separation
H 2+
Co
CoCl2 Film formation
COOH COO− +
H
Cl−
Fe3+
−
Cl−
COO COO− Co
2+ NaOH
H+ H+ Cl−
H2O
COOH Fe3+ COONa
CoFe2O4 CoFe(OH)4 COONa −
COOH COONa COONa OH Co2+
COOH COONa COONa
OH−
FIGURE 1.7 Schematic of formation of CoFe2O4 nanoparticles within the diblock c opolymer.
(Reproduced from Papaefthymiou, G. C., et al., Magnetic and structural characterization of
CoFe2O4 nanoparticles encapsulated within block copolymer films, Rev. Adv. Mater. Sci., 10,
306–313, 2005, with kind permission of Advanced Study Center Co. Ltd.)
30 nm
FIGURE 1.8 Morphology of block copolymer films: highly dispersed CoFe2O4 nanopar-
ticles, oval in shape and of average diameter d of 9.6 ± 2.8 nm, are observed. (Reprinted
with permission from Ahmed, S. R., et al., Magnetic properties of CoFe2O4 nanoparticles
synthesized through a block co-polymer nanoreactor route, Appl. Phys. Lett., 2002. 80(9):
pp. 1616–1618. Copyright 2002, American Institute of Physics.)
cobalt ferrite nanoparticles [28]. The particles are well separated by the intervening
polymer, but they are not of uniform size or shape, with an effective average diameter
of 9.6 nm and a standard deviation of ±2.8 nm.
Oil
Water
(a) (b)
(c) (d)
FIGURE 1.9 (a) Mixture of two immiscible liquids, (b) formation of emulsion through
rigorous shaking, (c) subsequent phase separation after cessation of shaking, and (d) stable
microemulsion in the presence of surfactants indicated by the solid circle drawn at the inter-
face of the two phases.
Oil
Water
Hydrophobic tail
Hydrophilic head
Water Oil
Hydrophobic tail
Hydrophilic head
(a) (b)
FIGURE 1.10 Depiction of interface characteristics in (a) reversed and (b) direct
microemulsions.
(a)
21 nm
30
(b)
25
Frequency (%)
20
15
10
0
0.5 2.1 3.6 5.2 6.8 8.3 9.9 11.5
Diameter (nm)
a well-defined size and providing terminal ligation to passivate the surface. Assuming
a log-normal distribution, analysis of the histogram in Figure 1.11b indicates particles
of mean diameter d = (5.8 ± 0.5) nm.
While microemulsions are obtained from three-component mixtures of water,
organic solvents, and surfactants, two-component mixtures of just water and sur-
factants result in the formation of surfactant aggregates, or micelles, with the polar
heads pointing outward toward the water and the hydrophobic tails inward. Mixtures
of organic solvents and surfactants also produce surfactant aggregates or inverse
micelles. In many synthetic processes involving magnetic nanoparticles, surfactants
are simply added to the reaction mixture in order to provide surface passivation, bio-
compatibility, and steric separation of the encapsulated nanoparticles. The resulting
core/shell structures replicate those of ferritin, in the sense that an inorganic solid
particle is encapsulated within an organic coat. Thus, such structures are generally
considered to be biomimetic.
I II
FIGURE 1.12 Schematic depicting the synthesis route for the formation of magnetoferritin.
(See text.) (From Meldrum, F. C., et al., Magnetoferritin: In vitro synthesis of a novel m
agnetic
protein, Science, 1992. 257: pp. 522–523. Reprinted with permission of AAAS.)
Stephen Mann and coworkers [34] demonstrated for the first time the synthesis of
such ferrimagnetic phases within ferritin via this process, schematically depicted in
Figure 1.12.
In their experiment, the iron was removed from native HoSF by dialysis, under
a nitrogen atmosphere, against thioglycolic acid (HSCH2COOH) in sodium ace-
tate (CH3COONa) buffer at pH 4.5 (step I in Figure 1.12). The resulting apoferritin
solution was buffered at pH 8.5 and maintained at a temperature of 55–60°C under
argon in a water bath. Fe2+ solution, prepared by the dissolution of ferrous ammo-
nium sulfate, (NH4)2Fe(SO4)2•6H2O in deaerated water, was added slowly in small
increments along with small amounts of air to produce slow oxidation (step II in
Figure 1.12). The data confirmed that the protein cage remained intact and that the
MPs were formed within the protein shell [34].
This seminal experiment established the use of apoferritin as a confined reaction
vesicle, or nanoreactor, for the production of iron oxide nanoparticles. The process
takes advantage of the unusual stability of the apoferritin shell at elevated tempera-
tures (60°C) and pH (8.5) needed for the synthesis of magnetite, as low-temperature
methods failed to produce magnetite in the presence of the protein shell. It is believed
that magnetite production within the ferritin cage proceeds in an analogous way to that
of ferrihydrite, that is, through the controlled oxidation of Fe2+ ions at the ferroxidase
center and subsequent migration and nucleation at the COO−-lined interior surface
of the protein cage. Just as in the case of ferritin biomineralization in vivo, this
process is presumably favored over the competing reaction in bulk s olution because
of the catalytic oxidation of Fe2+ by ferritin and the increased iron-ion concentration
within the protein interior cavity. This differentiation between “inside” and “outside”
is essential to the effective in vivo functioning of the protein and is also central to
the ferritin nanotemplating approach for the synthesis of nanophase materials within
the apoferritin shell.
The synthesis of magnetoferritin is now well established, having been repro-
duced by other investigators at various degrees of iron loading, and its magnetic
properties have been widely studied [35]. Fitting of superparamagnetic data for
ferritin and magnetoferritin to the Langevin function indicates roughly a core with
a magnetic moment of μc ~ 300 μB for ferritin [36], as opposed to μc ~ 13,100 μB
for magnetoferritin, corresponding to a magnetoferritin particle core containing
of the order of 12,000 Fe atoms [35]. The large difference in magnetic moment
is due primarily to the fact that the ferrihydrite core is antiferromagnetic, with
the particle moment arising only from noncompensated spins at its surface. In
contrast, the core of magnetoferritin comprises magnetite and/or maghemite, both
structures being ferrimagnetic with noncompensated spin sublattices throughout
the particle volume.
To date, many other magnetic phases have been synthesized within a poferritin,
further supporting the notion that the reactions are not specific to iron and that
the electrostatic properties of the protein play a significant role in the process of
mineralization. In addition to metal oxide and hydroxide phases [35], metallic
magnetic nanoparticles of Ni and Co have been produced within horse spleen apofer-
ritin [37], as indicated schematically in Figure 1.13. Once the Ni2+ and Co2+ ions have
entered the protein cavity, they can react with NaBH4, which is small enough to pass
through the threefold channels and enter the apoferritin interior. Thus, the divalent
metal ions, attached to the interior wall of the apoferritin cage, undergo reduction to
zero valence to produce metallic magnetic nanoparticles. Metal–alloy nanoparticles
have also been produced within apoferritin, such as FePt or CoPt [38] as well as
binary phase Fe/Co oxides [39].
Mammalian ferritin belongs to a “ferritin superfamily” of similar but distinct
protein cages occurring in bacterial life forms that are capable of sequestering
iron. These afford additional supramolecular templates for bio-inspired materials
synthesis. Among these, Dps [deoxyribonucleic acid (DNA)-binding proteins from
starved cells] proteins have been extensively investigated and used in the biomi-
metic synthesis of magnetic nanoparticles. Dps proteins possess a shell structure of
12 identical amino acid subunits, as opposed to the 24 heteropolymer subunits of
the canonical ferritins. They are smaller than mammalian ferritins possessing an
Apoferritin II
(0) M
(1) (2)
MII—Apoferritin M0—Apoferritin
8 nm
12 nm
(a)
5 nm
9 nm
(b)
FIGURE 1.14 Ribbon representation of the exterior surface and the interior cavity of
HuHF (a) and Dps protein from Listeria innocua (b). (Reprinted from Biochim. Biophys.
Acta, 1800, Uchida, M., et al., The ferritin superfamily: Supramolecular templates for
materials synthesis, 834–845, Copyright 2010, with permission from Elsevier.)
exterior diameter of ~9 nm and a central cavity with diameter of ~5 nm. Figure 1.14
gives a ribbon representation of in vitro produced h omopolymer, recombinant
human apoferritin consisting of 24 H-chains (HuHF) and that of Dps protein [40].
Dps proteins were first identified in the bacterium Escherichia coli in 1992, and
since their discovery homologous structures have been found in other bacteria and
archaea.
The 3D crystal structure of Dps proteins exhibits two types of threefold sym-
metry channels, one of which is lined with hydrophilic amino acids that can
facilitate the entrance of cations to the interior cavity of the protein. As in the
case of mammalian ferritin, once the iron ions are inside the cavity, they are elec-
trostatically attracted to the negatively charged surface of the interior wall where
the mineralization reactions can be initiated. The electrostatic surface of Listeria
innocua Dps is similar to that of canonical ferritins, with clusters of glutamic
acid residues lining the surface with negatively charged COO− ions that facilitate
iron cluster nucleation. The oxyhydroxide mineral core formed within the Dps
cavity can accommodate up to 500 Fe atoms, as opposed to 4500 Fe atoms in
mammalian ferritin. Investigators have used the Dps cage to form mineralized
γ-Fe2O3 nanoparticles. Treatment of the protein at pH 8.5 and 65°C with 400 Fe2+
40 nm 40 nm
(a) (b)
FIGURE 1.15 TEM micrograph of the Listeria innocua Dps cage mineralized with
γ-Fe2O3 stained with uranyl acetate (a) and unstained (b). (From Allen, M., et al. Protein
cage constrained synthesis of ferrimagnetic iron oxide nanoparticles. Adv. Mater., 2002,
14, 1562–1565. Copyright Wiley-VCH Verlag GmbH & Co. KGaA. Reproduced with
permission.)
(h)
(e) (f ) (g)
15 nm
(d)
FIGURE 1.16 Space-filling images of protein cage architectures with various (exterior)
diameters, d: (a) Cowpea mosaic virus (d = 31 nm); (b) Brome mosaic virus (d = 28 nm);
(c) Cowpea chlorotic mottle virus (d = 28 nm); (d) MS2 bacteriophage (d = 27 nm); (e) luma-
zine synthase (d = 15 nm); (f) ferritin (d = 12 nm); (g) small heat shock protein (d = 12 nm);
(h) Dps protein (d = 9 nm). Mosaic viruses are plant viruses that make the leaves of infected
plants acquire a specked appearance, while the MS2 bacteriophage is a virus that infects the
bacterium Escherichia coli. (From Uchida, M., et al. Biological containers: Protein cages as
multifunctional platforms. Adv. Mater., 2007, 19, 1025–1042. Copyright Wiley-VCH Verlag
GmbH & Co. KGaA. Reproduced with permission.)
The discovery of viruses dates back to 1892, with Dmitri Ivanovsky’s description
of a nonbacterial pathogen infecting tobacco plants, leading to the discovery of the
tobacco mosaic virus in 1898 by Martinus Beijerinck. Since then, over 5000 viruses
have been described in detail; they are the most abundant type of biological entity.
The viral capsids, once depleted of their genomic content, can be engineered to pos-
sess negatively charged interior walls, and thus electrostatically attract Fe2+ ions and
induce the hydrolytic polymerization of iron within their interior cavities in a way
analogous to that of the ferritin protein cage.
Viral capsids are presently among the most extensively studied biological
templates in the biomimetic synthesis of inorganic nanoparticles. Due to their
well-defined architectures and readily accessible genetic information, they afford
unlimited possibilities for structural modification via genetic engineering. Their
interior space is normally reserved for their genome, where in their native state
the viral capsids act as host containers for nucleic acid storage and transport.
However, purified viral coat protein subunits can be easily assembled in vitro into
empty virions even in the absence of RNA or DNA, and can therefore be utilized
as constrained reaction vesicles. In 1998, investigators Douglas and Young [44]
pioneered the approach of using viral capsids for the synthesis of size-constrained
inorganic and organic polymer species. In their experiments, they used Cowpea
chlorotic mottle virus (CCMV) as a model system for reversibly gated entrapment
of inorganic minerals. CCMV is an icosahedral virus composed of 180 identical
subunits forming a protein cage with an inner diameter of 18 nm and an outer
diameter of 28 nm (Figure 1.16a). This affords a cavity diameter approximately
twice as large as that of ferritin, defining a new upper limit for the crystal size
of entrapped minerals. The exact size of the capsid depends on the pH of the
medium, as it undergoes a pH-dependent reversible swelling behavior. The capsid
increases its dimensions by about 10% compared to the non-swollen form when
the pH of the medium is raised to ≥6.5. In its swollen (open) state, the CCMV
capsid provides 60 open pores of about 2-nm diameter each that allow small
external guest molecules to diffuse into the internal space [44]. Such dynamic
structural transitions induced by chemical switches are common in many virions
providing unique molecular gating mechanisms to control the containment and
release of entrapped materials—a property important in the design of targeted
drug d elivery agents in bionanotechnology.
X-ray structural analysis indicates that the basic arginine and lysine amino acids
line the interior wall of the CCMV capsid, providing a large positive charge. The
positive charge is necessary for the native virus to package and condense the anionic
viral genome. This is opposite to the case of ferritin where the interior wall is lined
with acidic glutamic acid, which provides a negative charge to the interior protein
cage wall. Thus, the native capsid exhibits an electrostatic attraction for negatively
charged species in the bulk solution, unlike ferritin. Indeed, the first material crys-
tallized within the viral capsid was accomplished by the electrostatic attraction
and subsequent oligomerization of aqueous molecular tungstate ( WO42-) ions to
form macromolecular complexes of paratungstate (H 2W12O42 10-
). Young and Douglas
demonstrated, however, that it was possible to alter the chemical properties of the
protein cage through rational design without disturbing the overall architecture of
the capsid [45]. They accomplished this by genetically engineering the protein to
replace the basic residues of the native capsid with glutamic acid, forming a mutant
capsid, with the electrostatic characteristics of the interior wall changed from cat-
ionic to anionic. The altered electrostatic character of the interior of the protein
favors strong interaction with ferrous ions, which promotes oxidative hydrolysis and
formation of size-constrained iron oxide particles within the viral capsid in a fashion
similar to that of apoferritin.
The electrostatically altered viral protein cage catalyzed the rapid oxidation of
Fe2+, leading to the formation of iron oxide magnetic nanoparticles. Specifically, the
purified mutant proteins were treated with aliquots of Fe2+ at pH 6.5 and allowed to
oxidize in air. Single and double mineralization processes, with loading factors of
2000 and 6000 Fe atoms per protein cage, were carried out, resulting in the forma-
tion of spherical particles with core diameters of (8.2 ± 1.6) nm and (24 ± 3.5) nm
[45]. High-resolution TEM images indicated that the resulting nanoparticles were
single-crystalline lepidocrocite.
Biotechnological processes borrowed from protein engineering techniques,
such as screening combinatorial peptide libraries using phage display, are
currently being explored for the identification of peptide sequences with high
specificity toward particular inorganic materials and in some cases with high
specificity toward unique crystal faces. Phage display, first described by
George P. Smith in 1985, is a laboratory technique for the study of protein–protein,
protein–peptide, and protein–DNA interactions that use bacteriophage (viruses
that infect bacteria) to connect proteins with the genetic information that encodes
them. One of the most common bacteriophage used in phage display is the fila-
mentous M13 bacteriophage. Identification of peptide sequences that promote the
nucleation of specific crystallographic phases is extremely useful in the direct
synthesis of magnetic nanoparticles with desired properties and crystal structure,
e.g., the hard magnetic FePt and CoPt nanoparticles in their high anisotropy
face-centered tetragonal (fct) phase, also known as the L10 phase, without the
need for postsynthesis h igh-temperature annealing. Unlike previous examples,
in this approach, biological interactions control the nucleation of nanoparticles
with no isomorphous complement in nature. For example, the identification of
a specific peptide sequence from screening the M13 bacteriophage engineered
into the protein cage of MjHsp from the thermophilic archaeon Methanococcus
jannaschii directs the peptide-specific recognition synthesis of L10 CoPt nanopar-
ticles, which exhibit room-temperature ferromagnetism [46]. Eliminating the
high-temperature annealing step would greatly simplify the production of hard
magnetic nanoparticles suitable for device applications.
160
(311)
140 (440)
120
100
Intensity (a.u.)
80 (511)
(400)
60 (220)
(422)
40
20
0
20 30 40 50 60 70
(a) 2θ (°)
(b)
FIGURE 1.17 (a) XRD pattern and (b) TEM images of oleic acid-covered γ-Fe2O3 nanocrystals.
Scale bar: 10 nm. (Reprinted with permission from Yi, D. K., et al., Nanoparticle a rchitectures
templated by SiO2/Fe2O3 nanocomposites, Chem. Mater., 2006, 18: pp. 614–619. Copyright
2006 American Chemical Society.)
Igepal
SiO2/Fe2O3
Fe2O3
nanoparticle
Rattle-type
TEOS HCl SiO2/Fe2O3
nanoball
Hollow SiO2
nanoball
1.4 MAGNETIC CHARACTERIZATION OF
IRON-BASED MAGNETIC NANOPARTICLES
Detailed magnetic characterization of bio-inspired magnetic nanoparticles is of utmost
importance in the development of biocompatible magnetic agents for various applica-
tions in biomedicine and biotechnology. The magnetic properties of nanometer-sized
particles and their assemblies are dominated by finite-size effects [48] and superpara-
magnetism and interparticle interactions [49] that can affect their quality and suit-
ability for various applications. Thus, in-depth magnetic characterization of prepared
nanostructures and their assemblies is an essential component to their development.
5 nm
(a) (b)
(c) (d)
nanocrystalline lattice of the particles through the hyperfine interactions of the 57Fe
nucleus with its electronic surroundings and yields atomic detail on the particles’
magnetic and electronic properties. SQUID magnetometry probes the total mag-
netic moment, or superspin, of the nanoparticle via its interaction with an applied
magnetic field. Furthermore, for investigations of dynamic nanomagnetism, the
Language: English
BY GEORGE L. AIKEN.
NEW YORK.
BEADLE AND ADAMS, PUBLISHERS,
98 WILLIAM STREET.
9
THE ANTELOPE BOY;
OR,
The surveying party were camped upon the banks of the Columbia
River, a short distance from the mouth of its confluent, the Yakima.
These boys merit more than a passing notice here, as they are
destined to play conspicuous parts in the events which were to
follow the advance of the surveying party into the country of the
Yakimas.
There was this peculiarity about them, that they were first cousins,
and were both called Percy—Percy Vere and Percy Cute.
Percy Vere was a slender youth, graceful and active, with a frank,
honest face, and regular features, his hair being a dark 10
chestnut, thick and curly, and his eyes a clear hazel, giving
evidence of courage and decision of character in their glances. He
looked quite picturesque in his coarse suit, with the trowsers tucked
into high-topped boots, and his crispy curls straggling from beneath
his broad-leafed felt hat.
Percy Cute was full a head shorter, and his figure was decidedly
dumpish. He had a fat, good-natured face, light flaxen hair, and a
laughing blue eye. Indeed, a grin appeared to be the prevailing
expression of his features. He was sluggish-looking, and appeared
like one who would not put forth exertion unless compelled to do so.
He was dressed after the fashion of his cousin and comrade, with
heavy boots, coarse trowsers, a striped shirt, with a broad collar, and
a kind of roundabout, which was short for a coat, and too long for a
jacket; and like him, he wore a revolver in a belt buckled around his
waist, the pistol resting convenient to hand, upon his right hip, while
on the left side the handle of a bowie knife made itself conspicuous.
All in this party carried arms, for the service was one of danger, and
at any moment the emergency for their use might arise.
The boys were quite favorites in the party, the first by his frank,
manly bearing, and accommodating spirit, and the other by his
unvarying good nature, and the drollery in which he was so fond of
indulging. His humor appeared to be inexhaustible, and his quaint
manner of giving vent to it was irresistible.
In fact, Percy Cute had, at a very early age, been forcibly impressed
by the antics of a clown in a circus, and his great delight had been
to play clown from that eventful moment.
“It don’t matter what I bring in,” he told Lieutenant Gardiner, “game,
fish or fowl—antelope, mountain sheep, or b’ar meat, that Ike can
just make it toothsome. These darkies take to cooking, ’pears to me,
just as naturally as ducks do to water.”
Ike had only one grievance in the camp, Percy Cute was continually
playing jokes upon him. Such little pranks as putting powder in his
pipe, nipping at the calves of his legs and imitating a dog’s growl,
and grasping his wool at night, and shouting a war-whoop in his ear,
had a damaging effect upon Ike’s temper, and he vowed deadly
vengeance. But his vengeance never extended beyond a chase 12
after Percy Cute with a ladle, with the laudable intention of
administering a severe spanking; but in these onslaughts the
redoubtable Isaac always came to grief; for, just as he would
overtake the flying youth, Cute, with a nimbleness that his sluggish
look and dumpy figure never led any one to expect, would suddenly
fall upon his hands and knees, and pitch his pursuer over him. But
as Isaac invariably alighted upon his head, he received no injury
from these involuntary dives. A shout of laughter would herald his
defeat, and he would pick himself up, and return to his camp-kettle,
in a crest-fallen manner, swearing to himself until every thing got
blue around him, and vowing that he would “fix him de next time,
suah!”
These little episodes enlivened the camp, and nobody enjoyed them
better than Gummery Glyndon. The old hunter had, generally, a
morose look upon his seamed and weather-beaten countenance,
and his hatred of every thing in shape of an Indian was well known.
Nor was the cause of that hatred a secret. He had been the victim of
one of those forest tragedies so frequently enacted upon the frontier.
It was the old story which has been told so often, and will be
repeated until the extermination of the red-man—which has been
going on slowly but surely for years—is completed.
While absent upon a hunting and trapping expedition, his cabin had
been surprised, his wife and only child, a little girl some three years
of age, cruelly murdered, and their mutilated remains consumed in
the fire that destroyed his home.
A blackened ruin was all that was left of the spot that was so dear to
him, and he found himself alone in the world, with only one thought
in the future—vengeance upon the murderers.
That was fifteen years before the time in which I introduce him here.
In all those years he had pursued the Indians with a deadly 13
malignity. He had taken part in every Indian war that had
broken out, and the number of his victims had been many.
As the years passed away this feeling of vengeance grew fainter, and
though he never spared an Indian who came against him with
hostile intent, yet he did not go out of his way to seek for them, as
he had done. The Yakimas were supposed to be the destroyers of
his home and family, and against that nation he cherished an
undying enmity. Yet circumstances had led him away from their
country, to the hunting-grounds of the Apaches, with whom he had
many encounters.
He had gladly accepted the service that would take him back to the
land of the Yakimas. In all these years he had gained experience as
a guide, in wood-craft, and as an Indian-fighter. No hunter of the
plains bore a better reputation for skill, prudence, and knowledge of
the Indians than Gummery Glyndon.
Percy Cute was a particular favorite of his, and none in the party
enjoyed the boy’s drolleries more than he did. Indeed, both the boys
were prime favorites with him, and often accompanied him upon his
hunts. He looked upon them in the light of proteges, as he had got
them their places in the expedition.
He had met them at Fort Benton, where they had come from Omaha
up the Missouri river, on one of the steamboats that ply on that
stream, and was rather surprised to hear what had brought them
there.
14
CHAPTER II.
THE ARROW MESSAGE.
Percy Vere explained this mission to the old hunter. His father had
been missing for years. He was an eccentric character, and professed
spiritualism, astrology, ventriloquism, and kindred sciences, dabbling
a little in magic and chemistry. In fact, he was a universal genius—a
jack-of-all-trades, and not doing well with any.
Percy’s mother was a woman of ability and good sense, a first rate
milliner, and her industry kept the wolf, which the father’s
eccentricities brought to the door, away. In other words, she was
obliged to support herself and son, and often furnish money to the
genius, who could not make it for himself with all his diverse talents.
His wife expressed her opinion of him freely one day, and told him
she could no longer expend her savings in his wild schemes. He
replied that it was the fate of genius to be misunderstood, that he
was destined to be a great man, and she would live to see it; and
having uttered this ambiguous prophecy, left her.
He did not return the next day, or the next—a year passed away
without bringing Guy Vere home. His wife became alarmed at his
prolonged absence. She reproached herself with being too harsh
with him and having driven him away from her. He was a handsome
man, and she had cherished a warm affection for him, which his
eccentricities had not destroyed. She feared that she had driven him
to commit suicide. But no tidings came of his death.
She was obliged to keep her little millinery shop going for the
support of herself and son, and her sister’s child, who being left an
orphan, fell to her care. This was Percy Cute—who was just 15
one year younger than his cousin, his mother having been so
pleased with the name of her sister’s child, that she had bestowed it
upon her own.
The little shop prospered, and the boys grew in years. Mrs. Vere
could not drive the image of her husband from her mind. If she
could have satisfied herself that he was dead, she would have been
more content, but she could not do that.
But many years passed away before she got any tidings of the
missing man, and then it came in a very vague shape.
Percy Vere got an Omaha Herald one day, which had been sent as
an exchange to a St. Louis paper, and in it was the advertisement of
an astrologer who called himself “Professor Guy.”
These words put her all in a flutter. She took the paper and scanned
the advertisement eagerly.
She took out the locket, which she wore constantly around her neck,
sprung it open, and regarded the two portraits it contained
earnestly, for it held her miniature likeness as well as his.
“I have not changed much,” she said, “and perhaps he has not,
either. I should really like to know if he is alive. Suppose I was to
write to this Professor Guy?”
“But if I was to go after him and have a talk with him, I might
prevail upon him to come back.”
Mrs. Vere was impressed by these words, but she answered: “How
could I trust you so far away from home?”
She surveyed his tall, graceful figure, with a mother’s pride, saying:
But they did talk about it upon several occasions afterward, and Mrs.
Vere’s desire to hear from her missing husband overcame all other
considerations, and she consented to Percy’s request to go in search
of him. She thought that the sight of his boy would induce him to
return home.
Her business had proved prosperous, as I have said, and she was
able to fit out the boys in good style. She hung the locket that
contained her own and husband’s likeness around her son’s neck,
and bade him a tearful “good speed.”
The boys took passage upon a steamboat bound for Omaha, and
steamed up the Big Muddy, as the Missouri is called by the dwellers
on its banks, and reached that ambitious city in due season.
Upon making inquiries, Percy Vere learned that Professor Guy had
found Omaha dull for the exercise of his profession, and had joined
a party of adventurers—a mixture of hunters and gold-seekers—and
gone with them to Fort Benton.
“I just tumble to any thing you say,” he told his cousin. “Follow your
leader—that’s my maxim. You lead and I’ll follow. Say! we might
have some high old fun among the Injuns, and bears, and things.
Let’s invest in a revolver and bowie-knife, and travel on our muscle!”
So Percy Vere, filled with a true spirit of boyish adventure, wrote his
intentions to his mother, and he and Cute made their preparations
for a journey into the wilderness.
Hitherto their journey had led through the land of the Nez 18
Perces, who were a friendly tribe, and they had been
undisturbed; but when they made this new camp Gummery Glyndon
told them they might now expect trouble from the Indians.
“There’s three tribes through here,” he said, “and there ain’t much
choice between ’em. There’s the Cayuses, the Yakimas, and the
Umatillas—a pesky set of murdering thieves the lot of ’em. They all
belong to the great Snake Nation, I believe—red sarpints, every
mother’s son of ’em.”
When he returned from his hunt he told them that he had seen
“Indian sign.”
“There’s Injuns watching us, and we shall hear from them,” he said.
“We’ll have to keep a sharp watch to-night, or they’ll stampede our
animals.”
The lieutenant and the surveyors did not neglect this warning. They
had great confidence in the old hunter’s judgment.
When the supper was disposed of the camp was placed in as good a
condition of defense as the locality would permit. The ground had
been well selected; it was a little grove on the river’s bank, a kind of
oasis among the cliffs, which rose beetling upon either side,
precipitously, and, apparently, inaccessible. These cliffs were some
distance—a long rifle-shot—from the little grove, and a kind of rocky
valley lay between them, devoid of vegetation in many places, where
the hard rocks cropped up. Through this valley must the foe come,
or else risk their necks, or a plunge into the river, by attempting to
skirt the cliffs.
The horses belonging to the party were secured in the grove. In the
center of the grove, in a kind of natural fireplace formed by the
rocks, the fire had been built, and its red embers were still glowing.
Two sentinels were posted at either extremity of the camp. Around
the fire the hunter, the surveyors, and the lieutenant were stretched
in easy attitudes, enjoying their pipes of tobacco—the great luxury
of the wilderness.
A short distance from them the two boys reclined upon a mossy
bowlder, listening to their conversation.
The sun had sunk, and the glorious twilight of that western 19
land was upon them. The scene was of calm tranquillity. But
that tranquillity was broken in a singular manner.
All started and grasped their weapons, instinctively, for the trusty
rifles were close at hand.
He threw some brush upon the coals which speedily burst into a
flame. Lieutenant Gardiner undid the scroll of bark from the arrow,
and spread it open. It contained characters which he had no
difficulty in deciphering, for they were written in English.
“White men, begone! If you advance further into the land of the
Yakimas, certain destruction awaits you.
“What does this mean?” added Lieutenant Gardiner, having read this
singular scroll aloud.
“That’s more than I can say; though, from what I’ve heard, there
appears to be a deal of trickery about it. He’s a great Medicine-man,
and can raise the Old Boy, generally. He has his familiar fiends, and
makes ’em appear to his followers whenever he likes. He works
miracles, and all that sort of thing. And when he predicts the death
of any one, they just go, sure pop, at the time mentioned.”
“I s’pose so, but I couldn’t say for sure. I don’t know the place; was
never up there.”
“Oh, yes. It is north of the Oregon line, and is a great place for
salmon-fishing. The Injuns have a great time catching ’em in the
season.”
“Yes; and his tribe is a conglomeration of all the other tribes, and
the pick of ’em, too. They are called Smohollers by the other 21
Injuns, but there’s Cayuses, Yakimas, Umatillas, Modocs,
Snakes, and Piutes amongst them.”
“A mongrel set!”
“You and your chum send the sentinels in to me, and take their
places—young eyes are sharp.”
Gummery Glyndon surveyed the nearest cliff critically. Its base was
about a stone’s throw from where he sat. The rising moon threw a
silvery radiance upon its peak, disclosing an irregularity near its top,
that looked like a cavity in its face, though it might have been only a
shadow.
“But how could any one get up there? A cat couldn’t climb that. It’s
as steep and as smooth as a wall.”
“Just you wait,” returned the old guide, coolly. “If this Smoholler is
the kind of man he’s said to be, we ain’t done with him yet. Just
keep your weather eye peeled in the direction of that cliff, and have
your rifles handy. That arrow was only the commencement. I saw
plenty of Injun sign to-day, and there may be a hundred of
Smoholler’s braves beyond there. I opine that he is not going to let
us travel much further into this country, if he can help it.”
“But, man, what harm does our surveying do him?” asked Blaikie.
“He don’t want any railroad through this country—all Injuns are
down on railroads—sp’ils their hunting-grounds, and settles up the
country. And the white settlers settle the Injuns. We’ve had a
genteel notice to leave, and if we don’t take it, we’ll have ’em
swarming round us like enraged hornets.”
“I don’t say go back, and I don’t say go on,” replied Glyndon, in his
deliberate manner; “but I say, just hold on for a while here, where
we are, until we can see how the cat jumps.”
The amazement of the old hunter was shared by the whole camp,
and the two boys came running in from their posts.
“See—see—look there!”
A strange fire issued from the face of the cliff, disclosing a little shelf
or platform, backed by a cavity. From this cavity the fire came forth
with crimson luster, and rose colored smoke rolled upward toward
the heaven, obscuring the moon-rays.
“It’s the debble’s fireplace!” mumbled Isaac, and his teeth chattered
together with superstitious awe.
The fire grew in intensity, and then a dark body seemed to grow up
in the midst of it. A black, unearthly figure of a man, with eyes of
fire, a tongue of flame, and livid horns projecting from his head, of a
deep-red color.
“The devil!” was the cry that burst from the lips of the astonished
whites.
“Fiend or man, I’ll have a try at him!” cried Glyndon, and he took a
rapid sight along the barrel of his rifle, and fired at the apparition on
the cliff.
Two other rifles echoed his, for Blaikie and Robbins had impulsively
followed his example. The three rifles sent forth their contents, and
the smoke clouded their vision for a moment. But following the
reports came an unearthly, soul-curdling laugh, and then something
pattered down among them like heavy drops of rain.
These words sent a thrill through every heart. Isaac, still lying curled
up in a heap where he had fallen, uttered a plaintive howl.
“Are you dead, Ike? If you are, say so, and tell us where you would
like to be buried,” he said.
“Well, if I warn’t hurt any more than you are, I shouldn’t mind it
much. Singed your wool a little, but your Hair Restorer will fix that
all right, you know.”
When the smoke of the rifles cleared away the fiend had vanished
from the cliff, and the crimson light had died away. The silvery
beams of the moon played hide and seek among the projections and
depressions of the cliff’s peak.
The gazers rubbed their eyes. What they had seen appeared to
them already like a fantastic dream. But a new vision awaited them,
a new wonder was to be presented to their eyes.
Another light began to glow from the cliff, but this time it was of a
bluish tint, and the smoke that arose from it was white and fleecy.
And this light grew dense, as the other had done, and assumed a
form and shape—a shape of ethereal loveliness.
The face was that of a girl, angelic in its beauty. Her long black hair
floated in wavy masses upon her neck and shoulders, and was
confined upon the forehead by a golden coronet in the center of
which gleamed a diamond star, which emitted scintillating rays of
light. Her arms and legs were bare, revealing their faultless
perfection, and the alabaster purity of her skin. Her only garment
was a long white tunic, of some snowy, fleecy fabric, confined at the
waist by a golden cestus, which was studded with large rubies 25
glittering with blood-red rays.
This angelic vision held in her right hand a kind of glittering dart. For
a minute she transfixed their wondering gaze, then hurled the dart
into their midst.
The fire around her grew more vivid, the volume of white smoke
increased in density, obscured her figure from view, and then began
to roll away. When the light of the fire faded and the smoke lifted
from the face of the rock, the platform was vacant, the lovely vision
had disappeared.
“Did you ever see a girl as pretty as that one was?” he asked.
“Well, no, I can’t say that I ever did,” the lieutenant admitted, with a
smile; “and if she is a human I should like to become better
acquainted with her.”
The hunter turned away his head and wiped his eyes with the back
of his bony hand. His hearers respected his grief for they knew the
story of Glyndon’s bereavement.