Bio 2106L
Bio 2106L
Parts of a Microscope:
Lesson 2: Magnification
A. Mechanical
a. Base – horseshoe-shape; supports the weight. Magnification – number of times the length and width or
b. Pillar – short column between base and arm. diameter of the specimen is enlarged or reduced.
c. Arm – for holding.
o Macroscopic – can with unaided eye.
d. Tube – hollow cylinder between eyepiece and
o Microscopic – can’t with unaided eye.
objectives.
e. Inclination joint – permits tilting of the A. Macroscopic Specimen:
microscope.
f. Revolving nosepiece – objectives are attached. 𝑑𝑟𝑎𝑤𝑖𝑛𝑔 𝑠𝑖𝑧𝑒
𝑀𝑎𝑔𝑛𝑖𝑓𝑖𝑐𝑎𝑡𝑖𝑜𝑛 (𝑋) =
g. Dust shield – above nosepiece; protects 𝑎𝑐𝑡𝑢𝑎𝑙 𝑠𝑖𝑧𝑒
objectives from dust. B. Microscopic Specimen
h. Stage – specimen is placed.
i. Stage aperture – opening in stage where light 𝑀𝑎𝑔𝑛𝑖𝑓𝑖𝑐𝑎𝑡𝑖𝑜𝑛 (𝑋) = 𝑒𝑦𝑒𝑝𝑖𝑒𝑐𝑒 × 𝑜𝑏𝑗𝑒𝑐𝑡𝑖𝑣𝑒
passes through.
j. Spring/stage clips – hold slide.
k. Diaphragm – regulate light, beneath the aperture.
i. Iris – lever regulates opening/closing.
ii. Disc – plate with several circular
openings.
l. Attachment screws – raises or lowers.
i. Coarse – approximate focus; LPO.
ii. Fine – sharper focus; HPO.
B. Optical
a. Mirror – two-faced; plane and concave.
b. Condenser – maybe absent; secondary lens.
c. Ocular/eyepiece – where one looks through.
d. Objectives
i. LPO – larger field; outline.
ii. HPO – greater magnification; details.
iii. Oil immersion – power of 97x or 100x.
iv. Scanning/scanner – larger field; full
outline; 3x, 4x or 5x.
Use of the Microscope
Always locate using LPO first!
o Mirror should be directed towards the light.
o Mostly, LPO and HPO are parfocal (if already focused in
LPO, can also be seen under HPO)
o If unclear specimen: turn fine adjustment.
o If more light is needed: adjust diaphragm or mirror.
Lower the LPO first close to the slide, then slowly move it
backward to see the outline. After, you can switch to HPO
(make sure the lens do not touch the slide)
Lesson 3: The Cell
Cell – unit of biological structure and function; self-existent and
self-reproducing.
Ciliated Columnar Cells – secretion, excretion, absorption,
Cells undergo specialization. and movement through the cilia; lung bronchi, uterine tubes,
uterus.
A. Parts of the Cell
o Cell Membrane – outer limits; semi-permeable
membrane.
o Cytoplasm – metabolic and synthetic activities; contains
organelles and inclusions.
o Organelles – small internal cellular organs.
o Inclusions – lifeless accumulations of
metabolites or cell products; temporary.
o Nucleus – center; essential for growth, development, and Smooth Muscle Cells –digestion and nutrient collection, get
continued existence of the cell; center of DNA and RNA rid of toxins; stomach, intestines, urinary system
synthesis.
o Nuclear Membrane – double-layered porous
limiting membrane; continuous with ER.
o Nucleoplasm – contains chromatin granules and
nucleoli.
o Chromatin granules – dispersed state of
chromosomes (genetic material)
o Nucleolus – contains RNA; center of protein and
RNA synthesis; one or more in a nucleus.
Organelles: Squamous Cells – promote diffusion in tissues in the lungs
and blood capillaries.
o Mitochondria – spherical, rod-shaped; supplies
energy for chemical reactions and active transport.
o Golgi complex – interlacing network of tubules;
concentration and packaging of secretory products;
may participate in synthesis of polysaccharides.
o Endoplasmic Reticulum – double-layered
membrane.
o Rough – protein synthesis.
o Smooth – lipid synthesis.
o Ribosomes – RNA and protein; sites of protein Epithelial Cells – respiratory and digestive tracts; form the
synthesis. covering of all body surfaces, line body cavities, hollow organs,
o Lysosomes – nearly spherical bodies; contains and major tissue in glands; protection, secretion, absorption,
hydrolytic enzymes for catalyzing digestion of foreign excretion, filtration, diffusion, sensory reception.
bodies.
o Lysis – rupturing of lysosomal membrane.
o Centrioles – pair of small granules or short rods;
formation of spindle fibers during cell division.
Exercise 4: The Protoplasm – complex dispersal system of water, salts, and organic substances bounded by membranes; colloidal
system.
𝑃𝑟𝑜𝑡𝑜𝑝𝑙𝑎𝑠𝑚 = 𝑛𝑢𝑐𝑙𝑒𝑢𝑠 + 𝑐𝑦𝑡𝑜𝑝𝑙𝑎𝑠𝑚 (𝑜𝑟𝑔𝑎𝑛𝑒𝑙𝑙𝑒𝑠)
Semi-liquid: Sol
Semi-solid: Gel
Test for Presence of Organic Compounds
Red color
Grease-Spot Test Concentrated oil Translucent spot on paper. Drop oil to newspaper.
10% 𝑁𝑎𝑂𝐻
Proteins
1% 𝐶𝑢𝑆𝑂4
Coagulation HCl Egg + 𝐻2 𝑂
NaOH Egg + 𝐻2 𝑂 + 𝑁𝑎𝑂𝐻
𝐻2 𝑂 𝐸𝑔𝑔 + 𝐻2 𝑂 + 𝐻𝐶𝑙
Egg albumin
Heat.
• Passively, cells obtain nutrients and release waste 1. Starch inside cellophane is immersed inside the iodine
through the semi-permeable membrane. solution.
2. After immersing, the starch turned blue.
A. Diffusion – movement of molecules from a region of high
Remember: 𝐼𝑜𝑑𝑖𝑛𝑒 + 𝑠𝑡𝑎𝑟𝑐ℎ = 𝑏𝑙𝑢𝑒 𝑐𝑜𝑙𝑜𝑟
concentration to lower concentration.
When immersing the “packaged starch” in the iodine solution,
there is a high concentration of IODINE outside the
cellophane.
Iodine molecules then diffused to the lower concentration
environment (starch) through the membrane (cellophane),
Experiment: The dye/powder is the “high concentrated” region hence explaining the blue color.
while the water is the “low concentrated region.”
Through diffusion, the dye/powder moved to the parts of “low
concentration” explaining why the color scattered throughout C. Osmosis – the net movement of water through a semi-
the water. permeable membrane from a region of low concentration
to high concentration.
No. of
Details Occurs in: Example
chromosomes
Division without spindle fiber formation Unequal ✓ Protozoans: ciliates, Paramecium sp.
Amitosis
suctorians
(direct)
✓ Unicellular
Equal division of nuclear materials Equal Nucleus (structural and Whitefish blastula
Mitosis
(karyokinesis) and division of cell body physiological changes)
(indirect)
(cytokinesis).
3. Blastula Stage
• Blastula – hollow ball of cells after cleavage.
• Blastomeres – cells undergoing cleavage.
o Micromeres – small, dark, animal.
o Macromeres – bigger, lighter, vegetal.
• Blastocoele – cavity inside the blastula.
C. Muscle Tissues
✓ Perform mechanical work through contraction.
✓ Motion (movement of body parts) and locomotion
(movement from one place to another)
Myofibrils – contractile fibrillar components.
a. Skeletal – striated, voluntary.
a. Fibrillae – contained by each fiber.
b. Sarcolemma – membrane.
c. Sarcoplasm – liquid cytoplasm.
b. Cardiac – striated, involuntary.
a. Intercalated discs – perpendicular to the
direction of fibers.
c. Smooth – non-striated, involuntary.
Exercise 9: External Anatomy of Toad or Frog iv. Pes/foot
v. Web – membranous extension of skin
Frog has no neck and tail (only present during larval/tadpole).
connecting one toe to another. (Longer
Male vs Female frog/toads: and slimmer in frogs for swimming)
1. First finger of male; very swollen during breeding season. Exercise 10: The Integumentary System
2. Male: dark pigmented areas at the angles of the lower jaws
• Functions:
on the ventral surface.
o Protection
3. Female is generally bigger.
o Sensation, excretion, respiration
• Layers of the Skin:
o Epidermis – outermost.
A. Axial Region ▪ Stratum corneum – a very thin layer of
a. Head – flattened. squamous cells.
i. Snout – triangular. • Desquamation – periodic casting
ii. External Nares – small openings near
off.
the snout on the nostrils.
• Molting/ecdysis – massive
iii. Eye
desquamation.
1. Nictating membrane – lower
▪ Transition layer – thickest layer; undergoes
lid.
keratinization.
iv. Tympanic Membrane – ear.
▪ Stratum germinativum – layer of actively
1. Columella – a small bone.
dividing tall columnar cells; attached to
v. Browspot – tiny white spot between the
basement membrane.
eyes; very distinct in frogs.
o Dermis – thickest layer.
1. Pineal body – third eye;
▪ Stratum spongiosum/laxum – looks loose
remnant is browspot.
because of cutaneous glands.
b. Trunk – elongated, slightly cylindrical.
▪ Stratum compactum – wavy muscle fibers;
i. Thoracic/chest – anterior half.
collagenous.
1. Parotid glands – elevated
• Subcutaneous connective tissue
structures behind the
– below the stratum compactum.
tympanum.
a. Absent in frogs. Exercise 11: The Skeletal System
ii. Abdominal/lumbar – posterior half.
1. Lumbar – dorsal. • Functions:
2. Abdominal – ventral. o Physical support and protection.
3. Anus o Surfaces for attachment of muscles.
4. Sacral hump – protrusion of • Two types:
pelvic girdle. o Exoskeleton – cuticle, shells, slimy exoskeleton,
B. Appendicular Region etc.
a. Forelimbs – anterior. o Endoskeleton – cartilage or bone.
i. Upper arm – first segment; attached to • Two Divisions:
trunk. o Axial – skull, visceral apparatus, vertebral
ii. Middle forearm column, ribs, sternum.
iii. Carpus/wrist o Appendicular – pectoral girdles, forelimbs, pelvic
iv. Manus/hand girdles, hindlimbs.
v. Fingers
vi. Pre-pollux – rudimentary first finger;
short stump.
b. Hindlimbs – posterior.
i. Thigh – first segment attached to body
mass.
ii. Shank
iii. Tarsus/ankle
The Skeletal System
Urostyle
Neural canal
Keel – standing upright.
Foramen – where the keel sits.
Centrum – joins the keel and foramen.
MUSCULAR SYSTEM:
A. Head Muscles
C. Abdomen
Part Description Origin Insertion Action
Rectus Cover ventral side of abdomen. Pubic border. Sternum and Support abdominal
abdominis • Linea alba – mid-ventral line (red due coracoid. viscera.
to ventral abdominal vein)
• Inscriptiones tendinae – crosswise
faint lines.
External oblique Thin; outer layer of body wall of abdomen. Dorsal fascia. Linea alba; dorsal to Support and
Muscles are obliquely caudal and ventral. rectus abdominis. compress abdomen.
Internal oblique Internal oblique muscles directed oppositely Transverse Coracoids, Support and
(transversus with external oblique’s. process of 4th xiphisternum, linea compress abdomen.
abdominis) to 9th vertebra; alba.
ilium.
D. Shoulder and Chest
E. Thigh