Unit-4 Cell Bio Transport Important Notes
Unit-4 Cell Bio Transport Important Notes
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UNIT 4
MEMBRANE
TRANSPORT-I
Structure
4.1 Introduction 4.4 Cytosis
Mostly, the globular proteins in the membrane are inserted in the bilayer with
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Unit 4
1 Introduction
Membrane
to Biomembranes
Transport-I
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their non-polar portion in contact with lipid and polar portion emerging out from
the membrane surface. These proteins serve as channels for specific ions or
molecules to cross this hydrophobic barrier, since many molecules required
by the cell are polar and cannot enter freely into the cell. These polar
molecules enter the cell through specific channel proteins found in the plasma
membrane. The channels are specific transmembrane proteins having polar
amino acids in the interior area. On the other hand hydrophobic non polar
molecules can enter or leave freely the cell through lipid bilayer. This
spontaneous process is termed diffusion. This process allows the small and
hydrophobic (or lipophilic) molecule to move inside and outside the cell
membrane. Diffusion is movement of substances (atoms, ions, molecules)
from a region of higher concentration to a region of lower concentration. This
results in uniform distribution of the substance. The driving force for diffusion
is concentration gradient. Diffusion obeys Fick’s law, which states that the
rate of movement of a substance is directly proportional to the concentration
gradient. Diffusion can be of three types:
x Simple diffusion
x Facilitated diffusion
In hypertonic
solutions, there are
more solute molecules
outside the cell which
causes the water
molecules to be sucked
out of the cell and the
cell shrinks.
In hypotonic solutions,
there is less solute
molecules outside the Fig. 4.1: Overview of membrane transport proteins. Passive transport across ion
cell, water will move channels or carriers is driven by a chemical gradient. Active transport by carrier
inside the cell. The cell proteins/ transporters allows a transport against a chemical gradient, thanks to
will grow larger and the consumption of energy, e.g. by ATP hydrolysis.
finally burst.
In isotonic solutions,
4.2.3 Osmosis
there is equal Osmosis is a special example of diffusion. It is diffusion of water molecule
concentration of solute
on both side of the through semipermeable membranes from a dilute solution to a concentrated
membrane; the solution. This process does not require any energy. Absorption of water by
movement rate of water plant roots is an example of osmosis in plant. Plant cells in a hypotonic
will be equal in both the solution gain water by osmosis and the plant tissue becomes stiffer (turgid)
directions.
while in a hypertonic solution plants loose water by osmosis and tissue
58 becomes flaccid (shrunken).
Unit 4
1 Introduction
Membrane
to Biomembranes
Transport-I
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Let us understand some of the terms which you will come across frequently in
this block.
Channels: Channels are proteins having several helical segments that are
spread back and forth through the membrane, forming a channel. For
example, the bacteriorhodopsin contains seven nonpolar helical segments
that traverse the membrane, forming a circular pore through which protons
pass during the light-driven pumping of protons.
Pores: Some transmembrane proteins have extensive nonpolar regions with
secondary configurations of E-pleated sheets instead of D helices. The E
sheets form a characteristic motif, folding back and forth in a circle so the
sheets come to be arranged like the staves/poles of a barrel. This E- barrel,
open on both the ends, is a common feature of the porin class of proteins that
are found within the outer membrane of some bacteria.
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Block 2
1 Membrane
Biomembranes
Transport
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4.3 ACTIVE AND PASSIVE TRANSPORT
Transport of substances against their concentration gradient (from lower
concentration to higher concentration) is energetically unfavorable; therefore
energy is required for this process. However, this process is essential for:
As mentioned in the previous section, carrier proteins and channels are two
major classes of membrane transport proteins. The transport through these
proteins can be further classified into two types depending on the requirement
of energy for the transport process:
i) Active transport
ii) Symport: When the carrier protein transports two solutes in the same
direction, it is called symport. It uses a downhill movement of one
molecule/ion to transport other molecule against its concentration
gradient. Symporters move both the molecules or ions in the same
direction through a transmembrane transport protein. They usually have
opposite charge.
ATP-Powered Pumps
All ATP-powered pumps are transmembrane proteins with one or more
binding sites for ATP located on subunits or segments of the protein that face
the cytosol. These pumps are grouped into four classes. Three of the classes
P-type, F-type, and V-type only transport ions, whereas members of the ABC
family primarily transport small molecules such as amino acids and sugars.
Here you must note that all of these ATP powered pumps are involved in
primary active transport as mentioned in the beginning of this section. 61
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Biomembranes
Transport
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Na+-K+ ATPase in the plasma membrane of animal cells and Ca2+ ATPase
pumps are examples of P-type of ATP powered pumps. During transport, at
least one of the subunits is phosphorylated (hence the name “P” class), and
the transported ions move through the phosphorylated subunit of the pump. All
known V and F pumps transport only protons. The H+ pump that generates
and maintains the plasma membrane electric potential in plant, fungal, and
bacterial cells, also belong to V-type. F-class pumps are found in bacterial
plasma membranes and in mitochondria and chloroplasts. In contrast to V-
class pumps, F-class pump generally function as a kind of reverse proton
pump. The energy released by the movement of protons form the exoplasmic
to the cytosolic face of the membrane down the proton electrochemical
gradient is used to power the synthesis of ATP from ADP and P i. Because of
their importance in ATP synthesis in chloroplasts and mitochondria, F-class
proton pumps are commonly called ATP synthases. ABC (ATP-binding
cassette) is a large family of multiple members that are more diverse in
function, for example multidrug-resistance proteins. You will study about ABC
family of transporters in detail in next unit.
Have you ever wondered why do we need so many diverse transporters? Just
think about the ionic composition.
The ion composition inside the cell is different from that in the extracellular fluid,
and this difference has to be maintained for cell survival. For example the
gradients of sodium (Na+), calcium (Ca2+), potassium (K+) and chloride
(Cl-), must be maintained within proper limit to ensure normal functioning of the
cell and maintenance of the membrane potential. In fact, all plasma membranes
have electric potentials (transmembrane potential) across them with inside of
the cell being more negative compared to the outside. This is due to active
transport of ions particularly H+ ions out of the cell. This potential difference
allows for the entry of positively charged ions into the cell but opposes the entry
of negatively charged ions. For example, the sodium ion (Na+) has higher
concentration outside of the cell than inside. This is maintained by a constant
active transport of Na+ out of the cell, which is also helpful in maintaining the
osmotic pressure on both the sides of the membrane. Ca2+ and Cl-
concentrations are also higher outside the cell than cell interior. On the other
hand, K+ is higher inside than the extracellular concentrations. This difference in
the concentration gradient leads to a change in electrochemical gradient across
the cell membrane. Table 4.2 gives the concentration of some of the commonly
occurring ions across the biological membrane.
Table 4.2: Concentration of some important physiological ions across
cell membrane.
S. No. Ion Concentration in Concentration in
cytosol (mM) extracellular space (mM)
1 Na+ 15 145
2 K+ 120 4.5
3 Cl- 20 116
More than one third of all of the energy exhausted by a non-dividing animal cell
is utilized for the active transport of sodium (Na+) and potassium (K+) ions.
Most animal cells have a low internal concentration of Na+, relative to their
surroundings, and a high internal concentration of K+. They maintain these
concentration differences by actively pumping Na+ out of the cell and K+ in by
the sodium-potassium pump. The cell obtains the energy it needs to operate
the pump from hydrolysis of adenosine triphosphate (ATP).
Proton Pump
The proton pump pumps protons (H+ ions) across a membrane using energy
derived from energy-rich molecules or from photosynthesis, for example
NADH dehydrogenase, cytochromes c oxidase etc. This generates a proton
gradient across the membrane. Generally, membranes are impermeable to
protons; therefore protons can diffuse back down their concentration gradient
by another co-transport protein like ATP synthase. You will learn about the
functions of these transport proteins in next block. The movement of protons
through their co-transport protein is coupled to the production of ATP, the
energy-storing molecule.
Many amino acids and sugars are accumulated in animal cells against their
concentration gradient i.e. they are transported into the cell from the extracellular
fluid, even though their concentrations are higher inside the cell. The transport of
these molecules is coupled with sodium ions to enter the cell down the Na+
concentration gradient established by the sodium-potassium pump. Thus, Na+
and a specific sugar or amino acid simultaneously binds to the same
transmembrane protein, on the outside of the cell and is an example of symport.
Both are then translocated to the inside of the cell, but in the process Na+ moves
down its concentration gradient while the sugar or amino acid moves against its
concentration gradient. The cell uses some of the energy stored in the Na+
concentration gradient, to accumulate sugars and amino acids.
Na+-Ca2+ Antiporter
Anion Transporter
Bicarbonate (HCO3-) transport mechanisms are the principal regulators of pH
in animal cells. Such transport also plays a vital role in acid-base maintenance
in the stomach, pancreas, intestine, kidney, reproductive organs and the
central nervous system. For example, exchange of HCO 3- for Cl- in a
reversible, electroneutral manner or Na+/HCO3- co-transport where proteins
mediate the coupled movement of Na+ and HCO3- across plasma
membranes, often in an electrogenic manner.
Glucose Transporter
GLUT4 Muscle and fat cells Amount in muscle plasma Mostly, the inner
membrane increases with membranes in a double
membrane system are
endurance training
intrinsically
impermeable to nearly
GLUT5 Small intestine Primarily a fructose transporter
all ions and polar
Porins molecules. For
instance, a large
Porins are proteins found in the outer membranes of many Gram-negative number of transporters
bacteria. They function to form a water-filled pore through the membrane, from are required to shuttle
metabolites such as
the exterior to the periplasm, which is a region located between the outer and ATP, pyruvate, and
inner membranes. The porin channel allows the diffusion of small hydrophilic citrate across the inner
molecules. mitochondrial
membrane.
Similarly, mitochondria also have two membrane systems, an outer and inner
membrane. The outer membrane is quite permeable to most small molecules 65
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Biomembranes
Transport
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and ions because of the presence of mitochondrial porin, a 30-35 kd pore
forming protein also known as voltage-dependent anion channel (VDAC). This
regulates the transport of usually anionic metabolites such as phosphate,
chloride, organic anions, and the adenine nucleotides across the outer
membrane. VDAC appears to form an open E-barrel structure similar to that of
the bacterial porins. The outer membrane of bacteria, like that of mitochondria, is
permeable to most small metabolites because of the presence of porins.
Beta-based membrane
potein is found in the
outer membranes of
4.4 CYTOSIS
bacteria, mitochondria Mechanism for transport of large quantities of molecules in and out of the cell
and chloroplasts. They
resemble barrels used to
is termed as cytosis. It is broadly divided into two types: endocytosis and
contain liquids. These E- exocytosis.
barrel proteins serve
essential functions in Endocytosis
cargo transport,
Most of the substances used as fuel molecules are polar and cannot move
signaling and re also
vital for membrane freely inside the lipid bilayer. The process used by single celled eukaryotes to
biogenesis. internalize these substances is known as endocytosis, in which the plasma
membrane extends outward and envelops the food particles. Endocytosis is
further divided into three types:
i) Phagocytosis
ii) Pinocytosis
iii) Receptor-mediated endocytosis
(a) (b)
Exocytosis
The discharge of larger material from vesicles at the cell surface is termed as
exocytosis. In plant cells, exocytosis helps in exporting materials required for
cell wall synthesis through the plasma membrane. In animal cells, exocytosis
provides a mechanism for secreting many hormones, neurotransmitters,
digestive enzymes and other substances.
a) One molecule of Na+ enters for the exit of each molecule of Ca2+.
[True/False]
b) Water is secreted out by the process of pinocytosis. [True/False]
4.5 SUMMARY
Let us recapitulate what we have learnt so far:
x When the carrier protein transports two solutes in the same direction, it is
called symport. When ion traverses in one direction and simultaneously
another metabolite is transported in the other direction, then it is called
antiport.
x The discharge of larger material from vesicles at the cell surface is termed
as exocytosis.
Terminal Questions
1. Passive transport is the simplest method of transport and is dependent
upon the concentration gradient and size and charge of the solute. In
passive transport, small uncharged particles move across the membrane
until the concentration becomes same on both the sides of the
membrane. Passive transport is independent of membrane proteins and
does not require expenditure of energy.
2. In simple diffusion, small uncharged molecules of non-polar hydrophobic
molecules pass through the lipid bilayer to leave or enter the cell, moving
from areas of higher concentration towards areas of low concentration.
For example, oxygen, carbon dioxide and most lipids enter and leave cells
by simple diffusion.
x Berg, J.M., Tymoczko, J.L. and Stryer L., (2012) W.H. Biochemistry (7th
ed.), Freeman and Company (New York), ISBN:10: 1-4292-2936-5,
ISBN:13:978-1-4292-2936-4.
x Nelson, D.L., Cox, M.M. (2017). Lehninger: Principles of Biochemistry (7th
ed.). New York, WH: Freeman and Company. ISBN: 13: 978-1-4641-2611-
6 / ISBN:10:1-6412611-9.
x Lodish, H., Berk, A., Kaiser, C.A., Krieger, M., Bretscher, A., Ploegh, H.,
Amon, A., Scott, M.P. (2016). Molecular Cell Biology (8th ed.). New York,
WH: Freeman & Company. ISBN-13: 978-1-4641-0981-2.
Voet, D.J., Voet, J.G., Pratt, C.W. (2008). Principles of Biochemistry (3rd
ed.). New York, John Wiley & Sons, Inc. ISBN:13: 978-0470-
70