Control of Microbial Growth-1
Control of Microbial Growth-1
OF
MICROBIAL GROWTH
1
The control of microbial growth
1-Definition + Introduction
2-Terminology relating to the control of microbial growth
3- The rate of microbial death:
-Factors influencing the effectiveness of antimicrobial treatments
4- Actions of microbial control agents
5- Physical methods of microbial control:
6- Chemical methods of microbial control
7- Antibiotics and other chemotherapeutic agents
2
The control of microbial growth
Control of growth usually involves the use of physical or chemical agents which either kill
or prevent the growth of microorganisms.
3
s
s
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The control of microbial growth
1-Definition + Introduction
2-Terminology relating to the control of microbial growth
3- The rate of microbial death:
-Factors influencing the effectiveness of antimicrobial treatments
4- Actions of microbial control agents
5- Physical methods of microbial control:
6- Chemical methods of microbial control
7- Antibiotics and other chemotherapeutic agents
5
The control of microbial growth
1-Definition + Introduction
2-Terminology relating to the control of microbial growth
3- The rate of microbial death:
-Factors influencing the effectiveness of antimicrobial treatments
4- Actions of microbial control agents
5- Physical methods of microbial control:
6- Chemical methods of microbial control
7- Antibiotics and other chemotherapeutic agents
6
The rate of microbial death
106
0 0 1,000,000
103
1 900,000 100,000
2 90,000 10,000
102
3 9,000 1,000
4 900 100
101
5 90 10
6 9 1
100
0 1 2 3 4 5 6
Time (min)
1- Population size
106
104
103
Low
population
102 load
101
100
0 1 2 3 4 5 6
Time (min)
2- Population composition: bacterial endospores >> vegetative cells and,
younger cells (log phase) <<mature organisms.
Some species are able to withstand adverse conditions better than others (ex: Mycobacterium
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tuberculosis).
3- Concentration or intensity of antimicrobial agent
Exceptions!.
4- Duration of exposure
5- Temperature
6- Environmental influences
9
The control of microbial growth
1-Definition + Introduction
2-Terminology relating to the control of microbial growth
3- The rate of microbial death:
-Factors influencing the effectiveness of antimicrobial treatments
4- Actions of microbial control agents
5- Physical methods of microbial control:
6- Chemical methods of microbial control
7- Antibiotics and other chemotherapeutic agents
10
Actions of microbial control agents
Damage to proteins
Proteins (enzymes) are functional in their three-dimensional shape.
This shape is maintained by chemical bonds:
Breakage
Hydrogen Covalent bonds Denaturation
(-SH) (cellular death)
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The control of microbial growth
1-Definition + Introduction
2-Terminology relating to the control of microbial growth
3- The rate of microbial death:
-Factors influencing the effectiveness of antimicrobial treatments
4- Actions of microbial control agents
5- Physical methods of microbial control:
-Heat (incineration, boiling, autoclaving, pasteurization, …)
-Filtration
-Low temperatures
-High pressure
-Desiccation
-Osmotic pressure
-Radiation
Sterilization (boiling, autoclaving, hot air oven) kills all microorganisms with heat; commonly
employed in canning, bottling, and other sterile packaging procedures.
1- Heat
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The control of microbial growth
1-Definition + Introduction
2-Terminology relating to the control of microbial growth
3- The rate of microbial death:
-Factors influencing the effectiveness of antimicrobial treatments
4- Actions of microbial control agents
5- Physical methods of microbial control:
-Heat (incineration, boiling, autoclaving, pasteurization, …)
-Filtration
-Low temperatures
-High pressure
-Desiccation
-Osmotic pressure
-Radiation
Incineration: burns organisms and physically destroys them. Used for needles, inoculating
wires, glassware, etc. and objects not destroyed in the incineration process.
Boiling: 100° for 30 minutes. Kills everything except some endospores. To kill endospores, and
therefore sterilize the solution, very long or intermittent boiling is required.
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Pasteurization is the use of mild heat to reduce the number of microorganisms in a product or
food (without damaging the taste).
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Dry heat (hot air oven): 160°/2 hours or 170°/1 hour. Used for glassware, metal, and objects
that won't melt.
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The control of microbial growth
1-Definition + Introduction
2-Terminology relating to the control of microbial growth
3- The rate of microbial death:
-Factors influencing the effectiveness of antimicrobial treatments
4- Actions of microbial control agents
5- Physical methods of microbial control:
-Heat (incineration, boiling, autoclaving, pasteurization, …)
-Filtration
-Low temperatures
-High pressure
-Desiccation
-Osmotic pressure
-Radiation
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Small volume solutions
Diameter: 0.45 µm (bacterial elimination)
0.22 µm (enzymatic filtration)
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3-Low temperatures (refrigeration and freezing
4-High pressure
Barophile endospores!!
This technique preserves the flavors, colors, and nutrient values of the products (ex:
treatment of fruit juices).
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The control of microbial growth
1-Definition + Introduction
2-Terminology relating to the control of microbial growth
3- The rate of microbial death:
-Factors influencing the effectiveness of antimicrobial treatments
4- Actions of microbial control agents
5- Physical methods of microbial control:
-Heat (incineration, boiling, autoclaving, pasteurization, …)
-Filtration
-Low temperatures
-High pressure
-Desiccation
-Osmotic pressure
-Radiation
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6-Osmotic pressure (drying)
Often used to preserve foods (e.g. fruits, grains, cure meats, etc.).
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7- Radiation (ionizing and nonionizing)
Ionizing radiation: The principal effect of ionizing radiation is the ionization of water, which
forms highly reactive hydroxyl radicals, which react with organic cellular components, especially
DNA. Effective against both vegetative cells and endospores, but not as effective against viruses.
Ionizing Nonionizing
Tanning
Bactericidal
Wavelength increase 26
Energy increase
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Nonionizing radiation (IR, UV): the best ex is UV light.
They are used to control microbes in the air, to disinfect vaccines and other medical products.
A major disadvantage of UV light as a disinfectant is that the radiation is not very penetrating,
so the organism to be killed must be directly exposed to the rays.
Organisms protected by solids are not affected.
The UV can damage human eyes, and prolonged exposure can cause burns and skin cancer in
humans.
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Microwaves! Sterilization?!
Moisture containing food are heated by microwave action, and the heat will kill the most
vegetative pathogens.
Solid foods heat unevenly because of the uneven distribution of moisture.
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The control of microbial growth
1-Definition + Introduction
2-Terminology relating to the control of microbial growth
3- The rate of microbial death:
4- Actions of microbial control agents
5- Physical methods of microbial control:
6- Chemical methods of microbial control
-Phenol and Phenolics
-Bisphenols
-Biguanides
-Halogens
-Alcohols
-Heavy Metals and their compounds
-Surface-Active Agents
-Chemical food preservatives
-Aldehydes
-Gaseous chemosterilizers
-Peroxygens (Oxidizing agents)
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7- Antibiotics and other chemotherapeutic agents
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Chemical methods of microbial control
1-Definition + Introduction
2-Terminology relating to the control of microbial growth
3- The rate of microbial death:
4- Actions of microbial control agents
5- Physical methods of microbial control:
6- Chemical methods of microbial control
-Phenol and Phenolics
-Bisphenols
-Biguanides
-Halogens
-Alcohols
-Heavy Metals and their compounds
-Surface-Active Agents
-Chemical food preservatives
-Aldehydes
-Gaseous chemosterilizers
-Peroxygens (Oxidizing agents)
7- Antibiotics and other chemotherapeutic agents 33
Biguanides
Chemical
Mechanism of action Preferred use Comment
agent
Skin disinfection,
Bactericidal to gram-positives and
Biguanides Disruption of plasma membrane especially for surgical
gram-negatives; non toxic, persistent
scrubs
Halogens
Chemical
Mechanism of action Preferred use Comment
agent
Iodine is an effective antiseptic available
Iodine inhibits protein function
as a tincture (allergy problem!!) and an Iodine and chlorine
and is a strong oxidizing agent;
Halogens iodophor; chlorine gas is used to may act alone or as
chlorine forms the strong
(Cl2, Br2, I2, disinfect water; chlorine compounds are components of
oxidizing agent hypochlorous
As2, F2) used to disinfect dairy equipment, eating inorganic or organic
acid, which alters cellular
utensils, household items, and glassware compounds
components
(carcinogen!!)
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The control of microbial growth
1-Definition + Introduction
2-Terminology relating to the control of microbial growth
3- The rate of microbial death:
4- Actions of microbial control agents
5- Physical methods of microbial control:
6- Chemical methods of microbial control
-Phenol and Phenolics
-Bisphenols
-Biguanides
-Halogens
-Alcohols
-Heavy Metals and their compounds
-Surface-Active Agents
-Chemical food preservatives
-Aldehydes
-Gaseous chemosterilizers
-Peroxygens (Oxidizing agents)
7- Antibiotics and other chemotherapeutic agents 36
Alcohols
Chemical Mechanism
Preferred use Comment
agent of action
Thermometers and other instruments; in
Bactericidal and fungicidal, but not
swabbing the skin with alcohol before
Protein effective against endospores or
an injection, lost of the disinfecting
Alcohols denaturation and nonenveloped viruses; commonly
action probably comes from a sample
lipid dissolution used alcohols are ethanol and
wiping away (degerming) of dirt and
isopropanol
some microbes
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The control of microbial growth
1-Definition + Introduction
2-Terminology relating to the control of microbial growth
3- The rate of microbial death:
4- Actions of microbial control agents
5- Physical methods of microbial control:
6- Chemical methods of microbial control
-Phenol and Phenolics
-Bisphenols
-Biguanides
-Halogens
-Alcohols
-Heavy Metals and their compounds
-Surface-Active Agents
-Chemical food preservatives
-Aldehydes
-Gaseous chemosterilizers
-Peroxygens (Oxidizing agents)
7- Antibiotics and other chemotherapeutic agents 38
Surface-Active Agents
Chemical agent Mechanism of action Preferred use Comment
Mechanical remove of Skin degerming and Many antibacterial soaps contain
Soaps
microbes through scrubbing removal of debris antimicrobials
Not certain; may involve Sanitizers in dairy and
Acid-anionic Wide spectrum of activity; nontoxic,
enzyme inactivation or food-processing
detergents noncorrosive, fast-acting
disruption industries
Cationic
Bactericidal, bacteriostatic,
detergents Enzyme inhibition, protein
Antiseptic for skin, fungicidal, virucidal against
(quaternary denaturation, and disruption
instruments, utensils enveloped viruses; (quats: Zephiran,
ammonium of plasma membranes
Cepacol)
compounds)
Organic acids
Chemical Mechanism
Preferred use Comment
agent of action
Metabolic inhibition, Widely used to
mostly affecting Sorbic acid and benzoic acid effective at low pH; control molds and
Organic
molds; action not parabens much used in cosmetics, shampoos; calcium some bacteria in
acids
related to their propionate used in bread. foods and
acidity cosmetics.
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Quats
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The control of microbial growth
1-Definition + Introduction
2-Terminology relating to the control of microbial growth
3- The rate of microbial death:
4- Actions of microbial control agents
5- Physical methods of microbial control:
6- Chemical methods of microbial control
-Phenol and Phenolics
-Bisphenols
-Biguanides
-Halogens
-Alcohols
-Heavy Metals and their compounds
-Surface-Active Agents
-Chemical food preservatives
-Aldehydes
-Gaseous chemosterilizers
-Peroxygens (Oxidizing agents)
7- Antibiotics and other chemotherapeutic agents 41
Aldehydes
Chemical Mechanism
Preferred use Comment
agent of action
Protein &
Glutaraldehyde (Cidex) is less irritating than formaldehyde Very effective
Aldehydes nucleic acid
(HCHO) and is used for disinfection of medical equipment antimicrobials
denaturation
Gaseous sterilants
Chemical Mechanism
Preferred use Comment
agent of action
Gaseous Protein Excellent sterilizing agent, especially for objects that
Ethylene oxide
sterilants denaturation would be damaged by heat
(Oxidizing agents)
chemosterilizers
Surface-Active
Chemical food
Heavy Metals
preservatives
Peroxygens
Biguanides
Bisphenols
Aldehydes
Phenolics
Halogens
Alcohols
Gaseous
Phenol
Agents
Site of action
Cell wall +
Cytoplasmic + + + + + +quats
membrane
Proteins (denaturation) + + + + + + + +
Nucleic acids +gld
Enzymes with SH + + +quats, +gld +
groups acid
anionic
1-Definition + Introduction
2-Terminology relating to the control of microbial growth
3- The rate of microbial death:
4- Actions of microbial control agents
5- Physical methods of microbial control:
6- Chemical methods of microbial control
7- Antibiotics and other chemotherapeutic agents
-Definitions (chemotherapy, chemotherapeutic agent and antibiotics…)
-Historical highlights of chemotherapy
-Properties of a satisfactory antibiotic
-classification of antibiotics and CA depending on their chemical structure
-classification of antibiotics and CA depending on their mode of action
-Measuring antimicrobial activity (MIC & MBC)
-Bacterial resistance to antibiotics
45
46
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The control of microbial growth
1-Definition + Introduction
2-Terminology relating to the control of microbial growth
3- The rate of microbial death:
4- Actions of microbial control agents
5- Physical methods of microbial control:
6- Chemical methods of microbial control
7- Antibiotics and other chemotherapeutic agents
-Definitions (chemotherapy, chemotherapeutic agent and antibiotics…)
-Historical highlights of chemotherapy
-Properties of a satisfactory antibiotic
-classification of antibiotics and CA depending on their chemical structure
-classification of antibiotics and CA depending on their mode of action
-inhibition of the cell wall synthesis
-damage to the cytoplasmic membrane
-inhibition of nucleic acid
-inhibition of protein synthesis
-competitive inhibitors
-Measuring antimicrobial activity (MIC & MBC) 48
-Bacterial resistance to antibiotics
Synthesis of Peptidoglycan
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Inhibition of cell-wall synthesis by penicillins and cephalosporins (β-lactams)
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Inhibition of cell-wall synthesis by Glycopeptides
Cycloserine inhibits the enzymes involved in the synthesis of the pentapeptide side chains.
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Inhibition of cell-wall synthesis by polypeptides
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Beta lactam antibiotics are normally bactericidal and require that cells be actively growing in
order to exert their toxicity.
Although nontoxic, penicillins occasionally cause death when administered to persons who are
allergic to them.
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INH (isoniazid) block the incorporation of mycolic acid into acid-fast cell walls while
ethambutol interferes with the incorporation of arabinoglactan. Both inhibit synthesis of the
acid-fast cell wall. Ex: treatment of M. tuberculosis
57
The control of microbial growth
1-Definition + Introduction
2-Terminology relating to the control of microbial growth
3- The rate of microbial death:
4- Actions of microbial control agents
5- Physical methods of microbial control:
6- Chemical methods of microbial control
7- Antibiotics and other chemotherapeutic agents
-Definitions (chemotherapy, chemotherapeutic agent and antibiotics…)
-Historical highlights of chemotherapy
-Properties of a satisfactory antibiotic
-classification of antibiotics and CA depending on their chemical structure
-classification of antibiotics and CA depending on their mode of action
-inhibition of the cell wall synthesis
-damage to the cytoplasmic membrane
-inhibition of nucleic acid
-inhibition of protein synthesis
-competitive inhibitors
-Measuring antimicrobial activity (MIC & MBC) 58
-Bacterial resistance to antibiotics
Damage to the cytoplasmic membrane
A very few antibiotics, such as polymyxins and colistins alter the microbial cytoplasmic
membranes and cause leakage of cellular needs. Polymyxins and colistins act as
detergents and alter membrane permeability in gram-negative bacteria. They cannot
effectively diffuse through the thick peptidoglycan layer in gram-positives.
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The control of microbial growth
1-Definition + Introduction
2-Terminology relating to the control of microbial growth
3- The rate of microbial death:
4- Actions of microbial control agents
5- Physical methods of microbial control:
6- Chemical methods of microbial control
7- Antibiotics and other chemotherapeutic agents
-Definitions (chemotherapy, chemotherapeutic agent and antibiotics…)
-Historical highlights of chemotherapy
-Properties of a satisfactory antibiotic
-classification of antibiotics and CA depending on their chemical structure
-classification of antibiotics and CA depending on their mode of action
-inhibition of the cell wall synthesis
-damage to the cytoplasmic membrane
-inhibition of nucleic acid
-inhibition of protein synthesis
-competitive inhibitors
-Measuring antimicrobial activity (MIC & MBC) 60
-Bacterial resistance to antibiotics
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62
The control of microbial growth
1-Definition + Introduction
2-Terminology relating to the control of microbial growth
3- The rate of microbial death:
4- Actions of microbial control agents
5- Physical methods of microbial control:
6- Chemical methods of microbial control
7- Antibiotics and other chemotherapeutic agents
-Definitions (chemotherapy, chemotherapeutic agent and antibiotics…)
-Historical highlights of chemotherapy
-Properties of a satisfactory antibiotic
-classification of antibiotics and CA depending on their chemical structure
-classification of antibiotics and CA depending on their mode of action
-inhibition of the cell wall synthesis
-damage to the cytoplasmic membrane
-inhibition of nucleic acid
-inhibition of protein synthesis
-competitive inhibitors
-Measuring antimicrobial activity (MIC & MBC) 63
-Bacterial resistance to antibiotics
64
Inhibition of protein synthesis by aminoglycosides
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Synergy - The aminoglycosides synergize with B-lactam antibiotics. The B-lactams inhibit
cell wall synthesis and thereby increase the permeability of the aminoglycosides.
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Inhibition of protein synthesis by tetracyclines
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Chloramphenicol has a broad spectrum of activity but it exerts a bacteriostatic effect.
It is effective against intracellular parasites such as the rickettsiae.
It inhibits the bacterial enzyme peptidyl transferase thereby preventing the growth of the
polypeptide chain during protein synthesis.
Chloramphenicol is entirely selective for 70S ribosomes and does not affect 80S
ribosomes.
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Inhibition of protein synthesis by macrolides
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The Macrolides may also prevent the transfer of the peptidyl tRNA from the A-site to
the P-site
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The oxazolidinones (linezolid) bind to the 50S ribosomal subunit and interfere with its
binding to the initiation complex
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The control of microbial growth
1-Definition + Introduction
2-Terminology relating to the control of microbial growth
3- The rate of microbial death:
4- Actions of microbial control agents
5- Physical methods of microbial control:
6- Chemical methods of microbial control
7- Antibiotics and other chemotherapeutic agents
-Definitions (chemotherapy, chemotherapeutic agent and antibiotics…)
-Historical highlights of chemotherapy
-Properties of a satisfactory antibiotic
-classification of antibiotics and CA depending on their chemical structure
-classification of antibiotics and CA depending on their mode of action
-inhibition of the cell wall synthesis
-damage to the cytoplasmic membrane
-inhibition of nucleic acid
-inhibition of protein synthesis
-competitive inhibitors
-Measuring antimicrobial activity (MIC & MBC) 74
-Bacterial resistance to antibiotics
Inhibitors of Folic Acid Synthesis
p-aminobenzoic acid + Pteridine
Pteridine
Sulfonamides
synthetase
Dihydropteroic acid
Dihydrofolate
synthetase
Dihydrofolic acid
Dihydrofolate
Trimethoprim reductase
Tetrahydrofolic acid
Thymidine Methionine
Purines
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The control of microbial growth
1-Definition + Introduction
2-Terminology relating to the control of microbial growth
3- The rate of microbial death:
4- Actions of microbial control agents
5- Physical methods of microbial control:
6- Chemical methods of microbial control
7- Antibiotics and other chemotherapeutic agents
-Definitions (chemotherapy, chemotherapeutic agent and antibiotics…)
-Historical highlights of chemotherapy
-Properties of a satisfactory antibiotic
-Classification of antibiotics and CA depending on their chemical structure
-Classification of antibiotics and CA depending on their mode of action
-Measuring antimicrobial activity (MIC & MBC)
-Bacterial resistance to antibiotics
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Measuring antimicrobial activity
(broth dilution testing)
MBC MIC
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Ten tubes containing the same appropriate medium with an increased concentration of an antibiotic
(ATB) were inoculated with a constant inoculum of 103 bacteria/tube of the above isolated strain.
After 18 hours of incubation at 37°C, we enumerate the amount of bacteria in each tube using
the spectrophotometric method and we obtain the following results:
1 2 3 4 5 6 7 8 9 10
Tube
[ATB] 0 µg/ml 2 2.5 3 3.5 4 4.5 5 5.5 6
Incubation at 37°C during 18 hours
logN 8 8 7.7 7.5 7 6.5 3 2 ~0 ~0
3-In which tubes does the antibiotic have a bactericidal effect? A bacteriostatic effect?
4-The tubes T9 and T10 were limpid. Cultures in plate agar were performed from these
two tubes and we obtain a positive culture in the case of the T9 while no growth was
observed in the Petri dish corresponding to the T10.
What represents T10? Give the full definition of the term representing the T10.
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Ten tubes containing the same appropriate medium with an increased concentration of penicillin
were inoculated with 104 bacteria/tube of a strain X isolated and purified from a patient with
a nosocomial infection without any change in their concentration. After 18 hours of incubation at 37°C,
we enumerate the amount of bacteria in each tube using the spectrophotometric method and we
obtain the following results:
Tube 1 2 3 4 5 6 7 8 9 10
[Penicillin]
0 2 3 4 5 6 7 10 20 25
in µg/mL
Incubation at during 18 hours
logN 8 0.05 0.05 0.07 0.07 0.075 0.04 0.03 0.0 0.0
Determine the MIC from the table above and give its definition.
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The E (epsilometer) test
Bacterial culture
MIC =
= MIC
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Disk-diffusion method
Zone of inhibition
Zone of culture Absence of colonies
[ATB]<MIC [ATB]>MIC
C = n/V C = n/π . r2 . h
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V = S . h V = π . r2 .h
As r increases C decreases
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Determination of LCC and HCC
Injected dose Detected dose in Treatment Side effects
(mcg/mL) the blood efficiency
1 0 - No
2 LCC 1 Minimum No
3 2 + No
4 3 + No
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LCC LCC
HCC HCC
Growth
If the diameter of the inhibitory zone > diameter of the LCC the strain is sensible to the antibiotic
If the diameter of the inhibitory zone < diameter of the HCC the strain is resistant to the antibiotic
Diameter in mm
Antibiotic Zone of inhibition
LCC HCC
X
Penicillin 12 16 14
Gentamycin 18.5 22 19
Cephalosporin 13.5 18 14
Augmentin 18 22 19
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The control of microbial growth
1-Definition + Introduction
2-Terminology relating to the control of microbial growth
3- The rate of microbial death:
4- Actions of microbial control agents
5- Physical methods of microbial control:
6- Chemical methods of microbial control
7- Antibiotics and other chemotherapeutic agents
-Definitions (chemotherapy, chemotherapeutic agent and antibiotics…)
-Historical highlights of chemotherapy
-Properties of a satisfactory antibiotic
-Classification of antibiotics and CA depending on their chemical structure
-Classification of antibiotics and CA depending on their mode of action
-Measuring antimicrobial activity (MIC & MBC)
-Bacterial resistance to antibiotics
91
The basis of bacterial resistance to antibiotics
Inherent (Natural) Resistance. For example, a streptomycete has some gene that is
responsible for resistance to its own antibiotic; or a Gram-negative bacterium has an outer
membrane that establishes a permeability barrier against the antibiotic; or an organism lacks a
transport system for the antibiotic; or it lacks the target or reaction that is hit by the antibiotic.
Acquired Resistance Bacteria can develop resistance to antibiotics, e.g. bacterial populations
previously-sensitive to antibiotics become resistant. This type of resistance results from
changes in the bacterial genome. Acquired resistance is driven by two genetic processes in
bacteria: (1) mutation and selection; (2) exchange of genes between strains and species.
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Horizontal evolution is the acquisition of genes for resistance from another organism. For
example, a streptomycete has a gene for resistance to streptomycin, but somehow that gene
escapes and gets into E. coli or Shigella. Or, more likely, some bacterium develops genetic
resistance through the process of mutation and selection and then donates these genes to some
other bacterium through one of several processes for genetic exchange that exist in bacteria
(conjugation, transduction or transformation).
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Ways in which Bacteria May Resist Our Control Agents
Most bacteria, however, become resistant to antibiotics by way of one or more of the
following mechanisms coded for by genes in the nucleoid or in plasmids:
1. Producing an enzyme capable of destroying or inactivating the antibiotic;
2. Altering the target site receptor for the antibiotic to reduce or block its binding; and
3. Preventing the entry of the antibiotic into the bacterium and/or actively transporting the
antibiotic out of the bacterium.
4. Modulating gene expression to produce more of the bacterial enzyme that is being tied
up or altered by the antibiotic.
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Beta-lactamases break the beta-lactam ring of the antibiotic, thus destroying the drug..
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Altering the target site receptor for the antibiotic in the bacterium
to reduce or block its binding.
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Altering the membranes and transport systems to prevent the entry of the antibiotic
into the bacterium and/or actively transport the antibiotic out of the bacterium.
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