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bioinformatics-for-biologists-analysing-and-interpreting-genomics-datasets_certificate_of_achievement_aowq4mj

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Uzma Khan
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23 views

bioinformatics-for-biologists-analysing-and-interpreting-genomics-datasets_certificate_of_achievement_aowq4mj

Uploaded by

Uzma Khan
Copyright
© © All Rights Reserved
We take content rights seriously. If you suspect this is your content, claim it here.
Available Formats
Download as PDF, TXT or read online on Scribd
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Issued 17th July 2024. futurelearn.

com/certificates/aowq4mj
Certificate of Achievement

Uzma Khan Niazi


has completed the following course:

BIOINFORMATICS FOR BIOLOGISTS: ANALYSING AND INTERPRETING GENOMICS DATASETS


WELLCOME CONNECTING SCIENCE

The course covered NGS sequencing, file formats used, Linux commands for sequence quality control,
mapping, and variant calling. Same tasks were performed using Nextflow, applied to viralrecon pipeline
with data visualization of variants obtained from genomic data as part of the downstream analysis.

3 weeks, 6 hours per week

Dr Treasa Creavin Dr Fatma Guerfali


Head of Scientific Meetings and Digital Learning Researcher
Wellcome Connecting Science Institut Pasteur de Tunis

The person named on this certificate has completed the activities in the This certificate represents proof of learning. It is not a formal
attached transcript. For more information about Certificates of qualification, degree, or part of a degree.
Achievement and the effort required to become eligible, visit
futurelearn.com/proof-of-learning/certificate-of-achievement.
Uzma Khan Niazi
has completed the following course: 90%
OVERALL
BIOINFORMATICS FOR BIOLOGISTS: ANALYSING AND INTERPRETING SCORE

GENOMICS DATASETS
WELLCOME CONNECTING SCIENCE

The course covered Next Generation Sequencing • Mapping sequencing data to a reference genome
and its significance in genomics, the installation for alignment and variant calling
of widely-used bioinformatics tools, the use of • Working with pipeline outputs in R to perform
different file formats, and Linux commands for downstream analysis and visualisation.
sequence quality control, mapping, and variant
calling. The analysis was also performed using
the workflow management system Nextflow, and
applied to viralrecon, an existing bioinformatics
pipeline. Downstream analysis included RStudio
data visualization of variants obtained from
genomic data sample.
STUDY REQUIREMENT
3 weeks, 6 hours per week
LEARNING OUTCOMES
• Use software managers to install and run
reproducible bioinformatics tools
• Handle and analyse sequence datasets through
hands-on exercises
• Analyse quality control metrics for sequencing
data
• Modify existing workflows to suit specific task
requirements and optimise analysis processes
• Interrogate and interpret the results obtained
from running bioinformatics pipelines
• Perform downstream analyses of pipeline
outputs using R, enabling data visualisation and
further exploration
SYLLABUS
• Brief introduction to sequencing technologies
and an overview of current sequencing outputs
• Sequence quality control to ensure data
accuracy and reliability
• Bioinformatics workflows utilising tools such as
Nextflow using nf-core pipelines

This transcript should be read alongside the accompanying Certificate of Achievement.


For more information about transcripts visit futurelearn.com. Issued 17th July 2024. futurelearn.com/certificates/aowq4mj

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