Respiration
Respiration
EXPLANATION NOTES
JUNE 2024
Topic 1. Respiration
As cambridge
Paper 1 ……34 to 38 / 40
Paper 2 …45 to 55 /60 Above 100
Paper 3 ….25 to 28 / 30 104/130
121/130
A2 Cambridge
1. Computerised notes
2. Hand written notes
3. Homework document ..+ QR code + ms
4. office hours doubts + solving quiz
Products
contain less
Products
energy than
contain more
reactants
energy than
reactants
Hydrolysis
Exothermic
ATP ADP + Pi
Condensation
Endothermic
Phosphorylated
70S
compound.
Source of Pi
Inner
6
membrane / ATP
cristae synthase
2
4
Matrix H+
1
H+ H+
NAD
NADH
Oxidised
Hydrogen carrier Energy is used to pump
4 ETC +
hydrogen ions into inter
H……H+ + e-
membrane space chemiosmosis =
2 Electron …e……pass along oxidative
electron carriers in the inner 5 Creating a proton gradient phophorylation
ETC
membrane of mitochondria
Electron
transport chain
H+ diffuse back by facilitated diffusion into the
6
3 Release of energy matrix through ATP synthase …energy used to
make ATP from ADP + Pi
Chemiosmosis
Phosphorylation by chemiosmosis
Break
5;58
Co enzymes
Non protein …assist enzyme
NAD
Co enzyme A
Hydrogen carrier , FAD Transfer acetyl group
transfer hydrogen NADP
Hydrogen carrier ,
Hydrogen carrier
transfer hydrogen
In plants
Glycolysis
Linked reaction In linked reaction
Kreb’s cycle In kreb’s cycle Kreb’s cycle
Oxidative phosphorylation In oxidative phosphorylation
NAD ATP DNA RNA
2X intermediate bisphosphate 3C
4 4 ATP
6. Substrate level phosphorylation where ADP and intermediate TP
( phosphorylated compound ) occupy the active site of an enzyme and the
phosphate group is transferred to ADP to form ATP ….produce 4ATP molecules .
2 x Pyruvate 3C
1. Glucose enter cytoplasm by facilitated diffusion
2. glucose + ATP ……..glucose 6 phosphate
3. Glucose 6 phosphate + ATP ……fructose 1, 6 biphsophate
TP TP
Dehydrogenation
Oxidised
NADH NADH
To reduce NAD
Intermediate TP Intermediate TP
Substrate level
2ATP 2ATP
phosphorylation
Pyruvate Pyruvate
3C 3C
In cytoplasm
2. Linked reaction
• dehydrogenation ..2 NADH
2 X Pyruvate ( 3C ) • Decarboxylation …2CO2
• Acetyl group bind to COA ..2X acetyl COA
Mitochondrial Matrix
1. Dehydrogenation to reduce NAD ( 2 reduced NAD) produced
2. Decarboxylation to form CO2 ( 2 CO2 produced )
2x Acetate ( 2C )
Co enzyme A
2 X acetyl (2C ) CO A Which delvers the acetyl group to Kreb;s cycle
AFN 3. Kreb’s Cycle
• 4 dehydrogenation ..3 reduced NAD, 1 reduced
FAD
2ATP , 2 FADH2, 6NADH • 2 decarboxylation ….2CO2
X2
• Substrate level …ATP
Mitochondrial Matrix
6C compound ( citrate )
2. B . Decarboxylation ( removal of CO2)
C. Dehydrogenation ( reduced NAD)
1 A. (2C) acetyl CO A
5C compound
Oxaloacetate (4C)
4C compound
C. Dehydrogenation ( reduced NAD)
E. Regeneration of oxaloacetate for
4.
cycle to continue
4C compound D. Susbtrate level
phosphorylation to produce
ATP
C. Dehydrogenation
4C compound
( reduced FAD)
5.
Glycolysis In cytoplasm
2 pyruvate (3C)
A) dehydrogenation ( oxidised ) …..produce reduced NAD x 2 ( 2NADH )
B) decarboxylation …….produce CO2 x2 ( 2CO2 )
Acetate ( 2c) …carried by CO A
Acetyl CO A
AFN
• 5 carbon compound
A) dehydrogenation ( oxidised ) …..produce reduced NAD
B) decarboxylation …….produce CO2 2ATP , 2FADH2, 6NADH
• 4 carbon compound
B) substrate level phsophorylation ….produce ATP
• 4 carbon compound
A) dehydrogenation ( oxidised ) …..produce reduced FAD
• 4 carbon compound
A) dehydrogenation ( oxidised ) …..produce reduced NAD
B) regeneration to oxaloacetate for cycle to continue .
10 NADH
H …….H+ + e-
2 FADH2
Chemiosmosis
ETC
NADH
FADH2
H ….H+ + e-
e-…ETC
D Oxidative phosphorylation 8chemiosmos.is
Takes place in inner mitochondrial membrane .
The final stage of aerobic respiration , where the energy for the phosphorylation of
ADP to ATP comes from the activity of the electron transport chain.
Where the reduced NAD and reduced FAD (reduced co enzymes) produced from
link reaction and Krebs cycle are oxidised .
This oxidation transfers energy to ATP during oxidative phosphorylation .
r
ab
Mitochondrial matrix
lG 2A
.
iha
Oxidation of reduced NAD and FAD releases hydrogen atom.
The hydrogen from Coenzymes is split into hydrogen ion and electrons.
.N
These electrons pass along carriers (from carrier to carrier) in the inner mitochondrial
membrane to reach the cytochrome oxidase complex).
The sequence of transport of electrons from one carrier to next is called electron transport
Dr
chain.
The ETC consists of large protein complexes and other molecules that are all components of
the membrane .
The energy released from electron transfer is used to pump protons into the inter membrane
space to create a proton gradient across the cristae.
The protons then diffuse back by facilitated diffusion into the matrix through ATP synthase ,
ATP is produced from ADP and Pi.
The ETC is responsible for creating the proton gradient that is put to use in making ATP.
Oxygen is the final electron acceptor.
Oxygen, protons, electrons together form molecules of water (oxygen is reduced to water).
This reaction is catalysed by cytochrome oxidase, which is part of one of the protein
complexes in the inner mitochondrial membrane.
Dr.Nihal Gabr 12
Glucose + 6O 2 …….6CO2 + 6H2O + ATP
Electron + H+ + oxygen
Cytochrome oxidase
Final electron acceptor
1/2O2 + 2H+ + 2e-= H2O H2O
Reduce oxygen to water
4 CO2 produced
2 CO2 produced
from Kreb’s cycle
from linked reaction
There is insufficient supply of oxygen ( where oxygen act as a final electron acceptor)
The final reaction oxidative phosphorylation doesn’t take place
The regeneration of NAD / FAD stopped
Where there is no other way for the reduced carriers ( reduced NAD and reduced FAD ) to be oxidised .
So linked reaction and Kreb’s cycle stop as they lack NAD and FAD .
Glucose
Pyruvate
Lactate dehydrogenase
Lactate dehydrogenase
ov
Lactate + 2 net gain ATP
Alcohol fermentation
Glucose
Glycolysis
Pyruvate
Decarboxylation
Catalysed by pyruvate decarboxylase
Removal CO2
Ethanal
H+ +e-
6 reduced NAD 4
Kreb’s
4CO2 3
cycle
2 reduced FAD ETC
Pump H+
2ATP
Structure of mitochondrion
3. Inter membrane space : low pH as its site with high proton concentration
4. Matrix :
-Location of enzymes for link reaction and Kreb’s cycle
-Site of link reaction / kreb’s cycle
-Contain loop of DNA / 70 s ribosomes for production of proteins such as enzymes , electron
carriers
• site of production of reduced FAD , reduced NAD for oxidative phosphorylation
• Site of production of ATP from substrate level phosphorylation .
Role of oxygen in aerobic respiration
Glucose is the essential respiratory substrate for the cell …….yet other cells can oxidise / break
down lipids and amino acids .
1 16kj /g
39 kj / g 2 3 17 kj /g
Why lipids has the highest amount of energy per unit mass ?
Deamination
Protein ….amino acids Using
…………… ATP
ketoacids ( carbohydrate part ) + urea
Glycolysis Proteins
Fats Pyruvate
Ketoacids
Acetyl CO A
Kreb’s
cycle
NADH
FADH2
Oxidative phosphorylation
Glycolysis ….2 NADH
Respiration without oxygen Linked reaction …2 reduced NAD
Kreb’s cycle …6 reduced NAD
…….2 reduced FAD
There is insufficient supply of oxygen ( where oxygen act as a final electron acceptor)
The final reaction oxidative phosphorylation doesn’t take place
The regeneration of NAD / FAD stopped
Where there is no other way for the reduced carriers ( reduced NAD and reduced FAD ) to be oxidised .
So linked reaction and Kreb’s cycle stop as they lack NAD and FAD .
A
Lactate fermentation Animals / bacteria
Glucose
Glycolysis ….( phosphorylation , split , substrate level phosphorylation)
Where the reaction is being
Pyruvate catalysed by lactate
In cytoplasm
dehydrogenase ( reversible
Pyruvate cant enter the mitochondria so remain in the cytoplasm .
Pyruvate will be reduced ( hydrogen acceptor ) by oxygen debt for
By reduced NADH from glycolysis converting lactate into
Reduced NAD will be oxidised ….to be regenerated so ATP production will continue from glycolysis pyruvate by lactate
dehdrogenase )
Lactate / lactic acid + 2 net gain ATP
Energy rich Transported to the liver by the blood
Glucose
Glycolysis
Reversible Pyruvate
reaction by
Lactate dehydrogenase
oxygen debt for Act as hydrogen acceptor from reduced NAD produced from glycolysis
Lactate dehydrogenase
converting the
Reduced into lactate
lactate into
reduced NAD will become oxidised ( regenerated)
pyruvate in a
reversible
reaction Lactic acid / lactate + net gain 2 ATP
catalysed by
lactate Will be transported in blood to the liver
dehydrogenase
B
Irreversible
Alcohol fermentation
Yeast C6 H12 O6 …….2CO2 + 2 C2H5OH
Glucose
Glycolysis
Pyruvate
Decarboxylation
Catalysed by pyruvate decarboxylase
Removal of CO2
Ethanal ( acetaldehyde )
ACT as hydrogen acceptor from reduced NAD
Ethanol dehydrogenase cataylse the conversion of Lactate dehydrogenase cataylse the conversion of
ethanal into ethanol pyruvate into lactate
No
Involves decarboxylation producing CO2
If a runner starts long distance event at a fast speed , then he will have to slow down to speed that is supported by
aerobic respiration, why?
1. No one can tolerate the high concentration of lactate that will be produced from anaerobic respirtaion when
running at a fast speed
2. No enough glycogen stored in body to provide glucose for such long time
3. Fats can only be respired aerobically .
Oxygen debt
The volume of oxygen absorbed by the body to metabolise the lactate produced from anaerobic respiration in
muscles .
Where it is responsible for the conversion of lactate into pyruvate in a reaction catalysed by lactate
dehydrogenase
Also reoxygenation to haemoglobin .
Respiration
Lactic acid
r
In a reaction cataylsed by lactate dehydrogenase
ab
Which is then converted into glucose .
lG
Also carbon dioxide is produced
Which lowers pH an this detected by pH receptors
To stimulate the increase in breathing rate
Then CO2 delivered to alveoli to be exhaled .
iha
-
.N
Dr
Proteins
4C2 H5O2 + 9O2 ……8CO2 + 10 H20
Where soil are flooded ….water logged ….decrease in concentration of oxygen in soil …..respire
anaerobically …ethanol production ( should be removed or the plant itself should be tolerant to ethanol )
1. Arenchyma
2. Ethanol dehydrogenase
3. Gibberellin
Describe how you would carry out an investigation on the effect of
temperature on the rate of respiration of yeast in anaerobic conditions
24
using a redox indicator, such as methylene blue.
Carry the experiment under 5 different temperatures ( 10, 20, 30 ,40,
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50 C )
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Get 5 test tubes add equal volume of glucose solution of same
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concentration
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Add to each test tube equal volume of yeast suspension
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Leave in water bath at the experimental temperature for 5 mins to allow
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equilibration
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Add to each test tube equal volume of methylene blue / DCPIP
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Add layer of oil on the surface of each test tube to ensure anaerobic
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conditions ( prevent entry of oxygen) .
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Control temperature using a thermostatic water bath
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Measure how long for methylene blue / DCPIP to turn from blue to
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colorless ( time )
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as it acts as hydrogen acceptors turning colorless when reduced .
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Use a colorimeter to avoid subjective judgment of final color
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Repeat the whole experiment twice ( two times at each temperature )
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Calculate the rate of respiration Using 1 / time
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Plot a graph for the rate of respiration against temperature .
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• The faster the rate of respiration, the faster the rate of hydrogen release and the faster the dyes
get reduced and change colour
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This means that the rate of colour change can correspond to the rate dehydrogenase
would be working at and therefore, the rate of respiration in yeast
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•
• The rate of respiration is inversely proportional to the time taken
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Rate of respiration (sec-1) = 1 / time (sec)
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© UCLES 2019 9700/41/O/N/19
Respiration
D) oxidative phosphorylation
Cytochrome oxidase …responsible for adding hydrogen to oxygen to form
water .
9. Anaerobic respiration
A) Lactate fermentation
Glucose ….pyruvate …..act as hydrogen acceptor so reduced NAD become
oxidised ….to be regenerated so ATP production continues through glycolysis ……
pyruvate will be reduced to lactate ………..
Hydrogenation
Pyruvate ………………………….lactate +2ATP
Lactate dehydrogenase
B) alcohol fermentation
Pyruvate …………ethanal ( act as hydrogen acceptor) ………….ethanol
2. Arenchyma tissue
Dead tissue with air spaces …extending from leaf to shoot down to root
Supply shoot and root with oxygen . ( oxygen reach to submerged parts)
Break
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