Research Methods for Successful PhD
Research Methods for Successful PhD
Successful PhD
RIVER PUBLISHERS SERIES IN INNOVATION AND CHANGE
IN EDUCATION - CROSS-CULTURAL PERSPECTIVE
Editorial Board
• Alex Stojcevski, Deakin University, Australia
• Baocun Liu, Beijing Normal University, China
• Baozhi Sun, North China Medical Education and Development Center, China
• Binglin Zhong, Chinese Association of Education Research, China
• Bo Qu, China Medical Education, China
• Danping Wang, Technological and Higher Education Institute, Hong Kong
• Fred Dervin, Helsinki University, Finland
• Kai Yu, Beijing Normal University, China
• Jiannong Shi, China Academy of Sciences, China
• Juny Montoya, University of Andes, Colombia
• Mads Jakob Kirkebæk, Aalborg University, Denmark
• Tomas Benz, Hochschule Heilbronn, Germany
Indexing: All books published in this series are submitted to Thomson Reuters Book Citation Index
(BkCI), CrossRef and to Google Scholar.
Nowadays, educational institutions are being challenged as professional competences and expertise
become progressively more complex. This is mainly because problems are more technology-bounded,
unstable and ill-defined with the involvement of various integrated issues. Solving these problems requires
interdisciplinary knowledge, collaboration skills, and innovative thinking, among other competences.
In order to facilitate students with the competences expected in their future professions, educational
institutions worldwide are implementing innovations and changes in many respects.
This book series includes a list of research projects that document innovation and change in
education. The topics range from organizational change, curriculum design and innovation, and pedagogy
development to the role of teaching staff in the change process, students’ performance in the areas of
not only academic scores, but also learning processes and skills development such as problem solving
creativity, communication, and quality issues, among others. An inter- or cross-cultural perspective is
studied in this book series that includes three layers. First, research contexts in these books include
different countries/regions with various educational traditions, systems, and societal backgrounds in a
global context. Second, the impact of professional and institutional cultures such as language, engineering,
medicine and health, and teachers’ education are also taken into consideration in these research projects.
The third layer incorporates individual beliefs, perceptions, identity development and skills development
in the learning processes, and inter-personal interaction and communication within the cultural contexts
in the first two layers.
We strongly encourage you as an expert within this field to contribute with your research and help
create an international awareness of this scientific subject.
Gregory P. Bierals
Dinesh Kant Kumar
Electrical Design Institute, USA RMIT University
Professor,
Melbourne
Australia
River Publishers
Published 2017 by River Publishers
River Publishers
Alsbjergvej 10, 9260 Gistrup, Denmark
www.riverpublishers.com
© 2017 River Publishers. All rights reserved. No part of this publication may
be reproduced, stored in a retrieval systems, or transmitted in any form or by
any means, mechanical, photocopying, recording or otherwise, without prior
written permission of the publishers.
Preface xiii
Acknowledgement xv
Abstract xvii
1 What Is Research? 1
1.1 Introduction . . . . . . . . . . . . . . . . . . . . . . . . . . 1
1.2 Research and Development: What Is the Difference? . . . . 3
1.3 Research, Development and PhD Students . . . . . . . . . . 4
Tasks . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 5
3 Attributes of a Researcher 15
3.1 Introduction . . . . . . . . . . . . . . . . . . . . . . . . . . 15
3.2 Knowledge and Creativity . . . . . . . . . . . . . . . . . . 16
3.2.1 Researcher Attribute – Knowledge . . . . . . . . . . 17
3.2.1.1 Ideas vs. literature review . . . . . . . . . 17
3.2.1.2 Literature review: Attention to detail . . . 18
3.2.2 Researcher Attributes: Creativity . . . . . . . . . . . 19
3.2.2.1 Fostering creativity . . . . . . . . . . . . 19
3.3 Research Attributes: Resilient and Self-Confident . . . . . . 20
3.3.1 Supporting to Develop Self-Confidence . . . . . . . 22
v
vi Contents
5 Responsibilities of a Researcher 55
5.1 Introduction . . . . . . . . . . . . . . . . . . . . . . . . . . 55
5.2 Accountability . . . . . . . . . . . . . . . . . . . . . . . . . 56
5.2.1 What Is the Need? . . . . . . . . . . . . . . . . . . 56
5.2.2 Comparison between Researchers . . . . . . . . . . 57
5.2.3 Challenges in Measuring Research Outcomes . . . . 57
5.3 Measuring Research Outcome . . . . . . . . . . . . . . . . 60
5.3.1 Some Measures of Research Impact . . . . . . . . . 61
5.4 Need for Peer Review . . . . . . . . . . . . . . . . . . . . . 62
5.5 Publications for Spread and Growth of Knowledge . . . . . 63
5.5.1 Review Process: Spread of Knowledge . . . . . . . 64
5.6 Review Process . . . . . . . . . . . . . . . . . . . . . . . . 64
5.6.1 Managing the Review Process . . . . . . . . . . . . 65
5.7 Summary of Responsibilities of Researchers . . . . . . . . 66
Tasks . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 66
7 Research Proposal 85
Task Before You Start This Chapter . . . . . . . . . . . . . 85
7.1 Introduction . . . . . . . . . . . . . . . . . . . . . . . . . . 86
7.1.1 Dynamic Idleness . . . . . . . . . . . . . . . . . . . 86
7.1.2 Mid-Candidature Blues . . . . . . . . . . . . . . . . 87
7.2 Purpose of Research Proposals . . . . . . . . . . . . . . . . 88
7.3 What Is a Research Proposal? . . . . . . . . . . . . . . . . . 88
7.4 Developing the Research Proposal . . . . . . . . . . . . . . 89
7.4.1 Title . . . . . . . . . . . . . . . . . . . . . . . . . . 90
7.4.2 Aim . . . . . . . . . . . . . . . . . . . . . . . . . . 90
7.4.3 Objective . . . . . . . . . . . . . . . . . . . . . . . 91
7.4.4 Scope . . . . . . . . . . . . . . . . . . . . . . . . . 91
7.4.4.1 Example to explain scope . . . . . . . . . 92
7.4.5 Research Questions . . . . . . . . . . . . . . . . . . 92
7.4.5.1 Example of research proposal . . . . . . . 93
7.4.6 Developing the Hypothesis . . . . . . . . . . . . . . 95
7.4.6.1 Example for developing the hypothesis . . 95
7.4.7 Developing the Methodology . . . . . . . . . . . . . 96
7.4.8 Time Frame . . . . . . . . . . . . . . . . . . . . . . 97
7.4.8.1 Project timeline . . . . . . . . . . . . . . 97
7.4.8.2 Regularity in timeline . . . . . . . . . . . 98
7.4.8.3 Changes to the timeline . . . . . . . . . . 98
7.4.9 Milestones . . . . . . . . . . . . . . . . . . . . . . 99
Tasks . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 99
Appendix 169
Index 171
When I did my PhD, there was luxury of time, and no pressure for a big
list of publications. There was time to sip a coffee while trying to solve
the world’s problems. The dull moments were ticking away, while we had
the time to invest for enjoying Pink Floyd. And then, I turned around and the
world was a different place. It was already 1998, and we researchers needed
a track record that no one had bothered to help me develop when I was a
student. Then I chased the Sun and since then have been able to develop a
decent track record, publish lots of papers and get quite a few citations.
Thanks to a decent track record, a few years ago I was asked to help PhD
candidates in a University in Brazil develop their skills for writing papers
that will get published. Every academic in the University was convinced that
the problem was their poor English language skills but they were willing for
me to experiment. I ran a few workshops for these students and realised that
being a PhD student now was stressful and not a relaxed existence which
I had enjoyed. I also realised that the problem was not the language, but it
was deeper than that. Researchers did not seem to understand what they were
doing but seemed to be eager to do ‘things’ and impress the supervisors.
I first blamed this on the Brazilian hierarchical culture, but soon noticed that
Australian, USA or Indian students were by no way different. The problem
seemed to be Global.
I became inquisitive and soon realised that there seemed to be a big
gap between what people expected to be as PhD students and the reality.
The problem was compounded by the mismatch of the expectations of the
supervisors, the University, and the grant bodies. Then I started to see the
different websites of the Universities and the Government and realised that
this was systemic and there was a lack of coherent message for what a student
should be doing. While on one end it was about training and independence,
the other end of the spectrum was about rules, deadlines, accountability and
support to the supervisor.
I know that the best and the brilliant minds of our society join Univer-
sities to do their PhD, but many of them get disheartened and confused.
xiii
xiv Preface
xv
Abstract
xvii
xviii Abstract
The book is also designed to help you identify your personal strengths and
goals. Each chapter has a set of tasks at the end and it will be useful to record
your answers safely. You should revisit these responses every few months as
that will help you keep a focus and observe your personal development.
1
What Is Research?
Abstract
The world and its citizens are looking towards the brighter future based on
their hopes of exciting research outcomes which is fueled by PhD students.
The number of people enrolling for their PhD is increasing rapidly, however
it appears that the role of a PhD candidate and their supervisors is not very
clear. While one common purpose of researchers is to conduct research, it is
evident that the word, Research, is used very loosely, with differences in the
understanding of its meaning, purpose and scope.
This chapter discusses the concept of research in different contexts and to
different stakeholders. It takes the reader through the dialogue to understand
the purpose, scope and expectations of what is PhD and highlights some of
the expected roles and attributes of the PhD students and their supervisors.
At the end of the chapter is a list of Tasks which is to help you identify your
personal strengths and directions. I encourage you to record your responses
and revisit these through your candidature.
1.1 Introduction
Etymologically, research can be considered to combine the prefix, Re with
Search, thereby suggesting repetitive search. However, it is significantly big-
ger and more complex than that; it is about discovery, investigation, invention
and development. The understanding of research is discipline dependent; in
humanities and pure arts research is practice dependent while, in the broadest
sense, scientific research includes any gathering of data, information and
facts for the advancement of knowledge [Definition of Research by Martin
Shuttleworth].
1
2 What Is Research?
Some people enjoy building things while the others are desiring to
understand the mysteries of the universe. Both, research and development
are essential components and these work in partnership to have a real impact
to our society. What is important is that you should identify your role, your
preferences and work towards it. This will help you develop the vision of
your PhD and you can make your long-term goals. Without having a vision
and long-term goals, we researchers loose the focus and the ability to enjoy
our victories and be happy.
Tasks
1. Is your PhD focused towards discovery or invention?
2. What is your passion; discovery or to build something?
3. Which famous scientists do you hold in high esteem? Why?
4. What is your definition of a successful researcher?
2
Why Are We Researchers?
Abstract
We the readers of this book are researchers, but many of us may not have
pondered on why we chose this profession. Often we end up reacting to our
daily issues and soon we find ourselves confused and unhappy. This chapter
investigates the question, and concludes that we all have our own reasons for
the choice of this profession. It is not designed to give you the answer, but to
facilitate you to explore the question for yourself. It provides a framework,
and shows that though our reasons and circumstances may be unique, it is
essential to continue to keep this question in our sights.
2.1 Introduction
There are number of professions, but we, the readers, chose to be researchers.
Is this just a job for us so that we can pay our bills? Is this profession anything
different from other professions that we could have chosen? Why did we get
attracted to this? It is essential to identify our connection with the profession
to ensure that we can perform suitably.
Many times during our careers, we will doubt our abilities, regret our
decisions to join research, and curse the day we decided to enrol for our PhD.
We will find that researchers, in general, do not become rich while many of
our colleagues who joined the industry soon after their bachelors are making
significantly more money. We will also notice that the boy (or girl) who was
the bottom of the class in school is driving a fancy car while we are travelling
in a train.
Many times we will suffer the continuing stress of rejection of our
publications; when we have spent hundreds of hours writing the papers, and
the editor sends a standard polite letter telling us that the paper is not suitable
for the journal. And the reviewers may not even be polite and may tell us
nasty things of what we considered as our great work.
7
8 Why Are We Researchers?
Worse still would be when we are working on yearly contracts and waiting
for the grant bodies to accept our proposals. In the current climate, while
the number of researchers is increasing exponentially, the pool of funds is
shrinking and the probability of success is reducing, we would often wonder
why did we join this seemingly losing race. Our grand ideas of solving the
world’s water or environment or health problems, written over many sleepless
nights, seemed to be considered to be unsuitable for any funds. While our
friends who joined the industry seem to have stable careers, we are stuck in
the year to year stress, unable to purchase a house or have a family. We sure
will feel our lows and stressed, but most of us would not leave and continue
to be in this profession. Why? I have asked myself this question many times.
It is when we are questioning our role in this profession that it is essential
for us to go back to the fundamentals, to the square one, to remember what
urged us to become scientists and researchers. It is very easy to get stressed
and then neither are we productive, nor comfortable, and that is when it is
essential to remember the original reason to be in this profession.
There is a combination of reasons why we chose our profession and many
of these may be very personal. Many of these were unplanned and things just
happened, while there are others that were deliberate. More often, it would
be a combination of multiple reasons and outcomes of events. For many of
us, we just walked into this, and often have never thought about how and why
about it.
Over time we evolve as researchers and our reasons for continuing to be
researchers may change. The purpose for a young PhD candidate may be
very different from an experienced researcher who is tenured and heading the
laboratory or is the chair of a center. Our perspective of the topics change, and
over time new research topics get added while some of the earlier topics seem
to disappear. Research and our relationship with it is dynamic. For the sake
of our sanity and to ensure we are productive, it is essential to be aware of our
reasons. We should also be aware that our reasons would be combination of
social, financial, and altruistic or even habitual. Being mindful of these helps
us improve the outcomes of our research.
To perform at our best, and enjoy being researchers, it is important to
observe our connection with our profession. The reason why we became
researchers often is very different from the reason why we continue to be
in the profession. However, reality is that there are multitude reasons that
are simultaneous and not divorced from each other. Research allows us to
be creative, not have a well-defined job, pays our bills, is more interesting
than other jobs, opens international opportunities and gives us an opportunity
2.2 What Is the Aim of PhD? 9
for long-term employment these are some of the reasons why I became a
researcher, and I am certain that this list is not complete.
For most people, the first step in becoming a scientific researcher may
have started earlier than we imagine; an assignment during our high school
may have been the trigger or a project during our undergraduate education.
Or it may be because we saw an opportunity which suggested a useful
product may result if we could solve some problem. Or, we heard of someone
suffering bad health because doctors could not diagnose the problem. Or,
we were confused by the way things seem to be happening and we wanted
answers. While the first seed may often be forgotten, for most of us the formal
start of the journey as researchers would have started with the enrolment as
PhD candidates. And, when we walked down that path, it is often difficult
to stop and change. We continue to be enjoying the privileges of being
researchers: be it in industry, University or even as entrepreneurs.
Universities and thus the PhD candidates. While there are many different
strategies and styles for supporting PhD candidates in different countries,
there is a global push to increase the numbers of these students and pro-
vide them with some financial support. Majority of Universities around the
world waive the fee for their PhD candidates and provide them with some
fellowship or scholarships to cover the basic living costs. In some countries
this support may be in the form of a salary, where the candidate has to
do their research and serve as an assistant on a project, the laboratory or
participate in University approved research or teaching activities. Often, there
may be significant overlap between the projects they are employed for and
the research related to their PhD candidature which makes the process very
efficient. Some Universities also offer conditional employment to faculty in
the University while they complete their PhD before their confirmation or
promotion.
of the candidate. However, there are demands on the academics and the insti-
tutions for research outcomes and this leads to pressure on the supervisors to
produce outcomes such as publications, devices or software and the outcome
of the research can becomes the focus. Process focused PhD candidature
slows down the outcomes, while outcome focused approach could make
candidates being a just a part of the machine for mass-production of papers
with the independence may be compromised. The pressure on the supervisors
and the laboratories can sometimes lead to the focus the PhD candidature to
be towards the research outcomes where the process is not important. This
become more direct when the funds for the students are coming from an
industry or are industry focused. Thus, there are two compounding factors
that play a role during the PhD candidature: the necessity to train independent
researchers and to show measurable research outcomes. If the focus simply
becomes the measurable outcomes, the students may appear to only satisfy
the short-term goal of the supervisor but not get trained to become an
independent researchers.
12 Why Are We Researchers?
These seemingly contradictory factors can make the life of the PhD
candidate stressful and the resultant graduate has limited scope and capability.
This may not result in a researcher who is trained to be independent and
the leader of future research. The resultant researchers would then have to
struggle to become independent and many such people appear to be tied
by invisible strings with their earlier supervisors. This can have number
of negative repercussions for the supervisors, the candidates and research
community in general. However, can the PhD student do something that can
prevent this from happening? The answer to that is Yes. But the first step is
to identify the problem.
The process where the supervisor tells the candidates what has to be done
will often appear to give excellent outcomes to the University and the society
in general. With the scholarship rather than a salary of a researcher, the super-
visor and thus the University can generate significant outcomes such as papers
and patents along with large number of doctorates inexpensively. However
these short term gains lead to long term losses because as the research leaders
age, the new researchers lack the independence and creativity to think outside
the box.
Our fast-paced ever changing research atmosphere demands fast-tracking
of the research outputs and this is not going to change any time soon. Perhaps
it may only become worse and more specific, allowing even less freedom for
the students. The cycles are becoming shorter, fund-pool is becoming smaller
and the number of candidates seems to be increasing. It is now important
that within this system, the candidates have to develop their independent
research capabilities and the supervisors have to generate new ideas from
their candidates.
for the future are based on the foundation of the knowledge of fundamentals
and of the current state of the art. It is essential that we have learnt from
the mistakes of others. But it also serves another essential purpose: allows us
to develop the plan that is based on the experience of others. And because
it is based on the strength of literature, other people are less inclined to
disagree.
Tasks
1. What is your personal reason for doing PhD? Write it down somewhere
and see it regularly.
2. In your opinion, what is Research?
3. Do you believe that your supervisor understands what is Research and
purpose of PhD?
4. What benefits will you get when you finish your PhD?
3
Attributes of a Researcher
Abstract
What are the attributes of a good researcher? Are we born with these
attributes, or can we imbibe these? Can we be trained to conduct research,
or is it something that comes to some of us naturally? Do all researchers have
to behave similarly, and is there a common method to train them? This chapter
teases out the answers to these questions, and suggests some methods to help
us become good researchers, and provides the reader with short questions to
identify the method that is most suitable for the individual.
3.1 Introduction
The fundamental purpose of PhD is to train the students to become inde-
pendent researchers. After completing their PhD, the graduates are expected
to take leadership roles and supervise other researchers. At the same time,
during their candidature, they generally work in teams while being supervised
to do very specific tasks in well-defined projects. It is essential that during
their candidature, they receive the training that prepares them for their future
careers where they can take leadership roles and think outside the box.
An independent researcher is one who has the ability and courage to
take responsibility in leadership roles, propose new projects, observe the
world from a different view-point and lead other researchers. This requires
knowledge, creativity, self-confidence and ability to communicate. It is also
essential for such a person to have time-management capability, be self-
motivated while being flexible and be resolute in ever changing situations.
In many cases, the inability to take leadership roles and become indepen-
dent can be attributed to the individual rather than blamed to the external
factors.
15
16 Attributes of a Researcher
“When a man tells you that he knows the exact truth of anything, you
are safe in inferring that he is an inexact man”, (B. Russell, The scientific
outlook, 1931). This is so true here; as the PhD student grows to become a
seasoned researcher, so does the ability to realise how little he or she knows. A
confident and independent researcher does not hesitate to say, ‘I don’t know’,
which may be very difficult for a young student. This chapter discusses some
of the attributes and suggests methods to enhance our capacities to take a
young PhD student to become confident and an independent researcher.
Many times, we researchers like to believe that we are the first person
who has got this great idea. However, such feelings should be quickly brushed
aside and we should check the literature. There is nothing wrong in borrowing
ideas from others, while ensuring that you do a better and more detailed job.
When we believe that we have the greatest idea, we can get obsessed with it
and rather than a badge of honor, it becomes a burden. But if we had done
careful evaluation of the literature, we may sometimes realize that the idea
had been discarded by others a long time ago.
As a researcher, it is essential to make a habit of reading the journals
and publications in your area, and also the scientific magazines that are in
the related areas. We are now living in the world of information overload
and most journals are providing free access to researchers who are associ-
ated with Universities or other research institutions. Thus, downloading the
publications on our tablets, phones or laptops and reading these at leisure or
reading these publications in any other style are the essential attributes of a
researcher.
Confidence requires courage, the ability to accept that I may not be correct
at all times. It needs the courage to accept that I may not know things and I
have to learn from someone else. No one was born knowing how to even
walk, let aside the knowledge of solving Maxwell’s equations. Research is
about going beyond the current knowledge. Thus, it is important to realise
that we are experimenting and do not know what is the possible outcome.
Someone who wants to be always correct is better off being an administrator
than a researcher.
A confident researcher is resilient and willing to take the chances that
are essential for big breakthroughs. A researcher needs to take risks, propose
new projects and submit manuscripts for publications, and very often will get
rejection letters. It is important to learn from the rejections and start again.
This requires resilience, self-confidence and courage. Often a successful
researcher gets more rejects than the unsuccessful researcher, but is willing
to try again.
The level of self-confidence is not the same for all people, neither does it
remain the same at all times for an individual. Some people appear to be more
confident, or as they say, blazay and willing to take the chance while there are
others who appear to be more cautious. Researcher confidence is not judged
with the swagger during their walk, or their blase attitude, but the strength of
their confidence is evidenced during their planning.
Another factor that helps the researcher be confident is the external cir-
cumstances such as the support that is available. The support that is available
to the researcher is the responsibility of the supervisor. This need not only
be the financial or technical support but the planning prior the experiments
and attitude after the results are obtained. One of the biggest cause of lack
of confidence is the feeling of the unknown, resulting in fear. Often the
researchers appear to be at the bottom of the food chain and thus are fearful
of the University policies and what happens behind the closed doors of the
supervisors. One of the methods that University can improve the confidence
of the researchers and thus their output is to improve transparency. While it
is often not possible for any Institution to give guarantees to the researcher
or offer them long-term careers, what is essential is to make the process
transparent such that the researchers understand the process.
Another aspect that enhances the confidence of the researcher is the
feeling of belonging. When Universities, institutions or companies are just
places for working and getting the salary or scholarship, people are not
creative. Social gatherings and non-academic events are important for the
researchers to belong, to network and enjoy their presence in the University.
22 Attributes of a Researcher
It facilitates them to communicate and share their ideas with their peers and
others and show-case their work. Universities also find it convenient to use
such forums to observe and evaluate the progress of the candidates. However,
when such double-dipping takes place, the focus of such meetings is lost and
the outcome can be very confused, and the original purpose may have been
lost. It is important that there should be forums where the peers, supervisor
and other academics should listen without judgement and such gatherings
should be focused and only for training the candidates.
deviate from the plan because it may be inconvenient. However, one purpose
of the plan to guide us through the phase when things do not appear to be
going smoothly. While a research plan is not set in stone and there are always
changes to be made and it requires to be tweaked, but it is important that this
is done in a very disciplined way. In general, it is a good idea to sit with the
supervisor before making major changes to the plan.
It is essential that you are truthful to yourself and write it down so that
you understand what is truly happening. If it is kept in the mind, it is soon
forgotten and the project plan becomes very irrelevant.
field to lay people. Very capable people of sciences may remain unknown and
unemployed if they lack the ability to communicate.
looking silly. This can result in saying the wrong things and causing dishar-
mony and can be especially damaging when it happens routinely between the
student and supervisor or with colleagues. This may, however, become more
challenging when giving a prepared presentation such as at a conference.
In summary, it is essential for researchers to develop their communi-
cations skills. These include formal and informal; writing and oral. Good
formal writing skills are required for publications and reports while informal
writing skills are necessary for emails and similar. Informal oral skills are
necessary for meetings while formal are required for presentations. In each
of these, there is the need identify the main important message, understand
the audience, have a plan for delivering the message and train to listen and
observe.
Tasks
1. Write down in dot-points why you are doing your PhD? Be honest, and
do not share this with others. But keep this safely with yourself.
2. Do you consider yourself to be creative? Or knowledge focused?
3. How regularly do you conduct literature review? How often do you read
textbooks to understand the concepts?
4. Do you have a time-plan? If yes, how often do you refer to it?
5. Write down the list of activities you did during the past 2 days.
6. Conduct an experiment where you explain your work to three people,
and each person independently records what they have understood.
Compare their notes and see if these are the same.
4
The Supervisor and the Supervised
Abstract
Research students, and young researchers need supervision and thus a super-
visor. Often the selection of the student and supervisor seems to happen acci-
dently, and the two people have to learn about their roles over time and adapt
to each other. However, despite best intentions, there may be tensions, leading
to disputes. Such situations may lead to high dropout rate among research
students. To overcome disputes that may take place, Universities have
attempted to develop rules of the dos and don’ts. However, reading the list
of the rules developed by some of the Universities makes one remember the
classic, 1984 (Orwell).
This chapter is written for helping the reader understand the relationship
between the research student and the supervisors. It discusses the expecta-
tions of both, the supervisor and the student and methods to get the mutually
beneficial outcomes. It also suggests techniques that could be used for iden-
tifying the most suitable supervisor for a student and is written to benefit the
student and the supervisors.
4.1 Introduction
Bertrand Russell remarked in 1926; “Cast iron rules are above all things to be
avoided”, and that is so important in the relationship between a student and
the supervisor. A PhD student and the supervisor will always end up having a
very special relationship and what works for one may not work for the other
pair. This relationship requires flexibility and maturity on behalf of both: the
supervisor and the student.
31
32 The Supervisor and the Supervised
I have been observing how PhD applicant and the academics start the
journey, and join hands to become a team called ‘the supervisor and the
supervised’. In most cases this process is seemingly random, specially when
the student is from another state or country. A common scenario is that
the student has finished or is nearing completion of the earlier degree and
searches the internet. At this stage, it is possible that he or she may have
some research ideas but more often these are relatively vague and appears
to be a whim rather than anything concrete. The ideas may have developed
based on some family members expertise, an event or just a news item. Or
it may be more opportunistic and they saw an advertisement of a scholarship
and realised that they could be suitable candidates.
Many times the PhD applicant may only have identified a set of keywords
that describe their interests but without details and all very fluid. Or they may
have made a wish-list of the big problem they wish to solve, without a plan or
any idea of who else is working in the space. At this stage they may not even
have decided on the country they would go, and thus the search on the web is
amateurish and similar to a fishing expedition in the dark. Some candidates
resort to sending bulk emails and hope to find some receptive academic who
will respond. However, not all candidates are in the unknown, and the other
end of the scale is where the candidates who appear to be very focused; know
the University they wish to go, the laboratory they wish to work in and the
specific project they have in mind. The reality is that despite the focus or lack
of it, the match-making exercise between the supervisor and the student is
quite arbitrary.
When an undergraduate student is enrolled in the University, the student
experiences large number of academics and laboratories. There is no single
academic who has the sole responsibility or authority for the student, and
in most cases they will barely recognise each other outside the classroom.
However, when the PhD student joins the University, it appears to be joining
a single laboratory and with one or two academics having sole responsibility
for their candidature. Thus, the student has joined a 4 year program to
be connected with a single laboratory and single academic. Similarly, the
academic has taken the responsibility of the student without knowing the
student other than having seen the undergraduate grades. Such a situation can
lead to opportunities and strengths, but can also be the basis of difficulties and
complications. This chapter discusses some of the methods that can ensure
this relationship is positive. It also recognises that there are possibilities of
conflicts and suggests methods that may reduce their impact.
4.2 Student and Supervisor 33
program, may have had a vision of an ideal supervisor; one who is patient,
knowledgeable, understands the students’ needs and is able to manage the
resources for the benefit of the student. Such a supervisor should have an
open door and the student can walk in when and if they have any problems,
and should have the patience to listen to their problems and respond to their
questions with knowledge and wisdom.
In general, strong-willed students who are seeking to become independent
researchers of the future wish for independence and choice. Thus the ideal
supervisor would allow the PhD student to undertake the project of the stu-
dent’s choice, be kind and considerate, and not be harsh when students make
a mistake or even destroy the equipment. They should respond immediately
to the emails of the students but be patient if the student does not respond
to their emails. They should never criticize the students for poor analysis
or badly written text but edit the ill planned papers written by the student
with ease and immediately after they receive it from the student. And after
they have written the paper for the student, they should not be disappointed
happy even if the student decides to publish the paper without including the
supervisor as a co-author. While this list looks a little exaggerated, it is not
very far from the wish-list of many students. Many of them may not voice
their demands, but the expectations are real.
There may be many other issues that could affect the response of the
supervisor such as their personal financial problems and may prioritize the
payment of the mortgages ahead of reviewing the paper sent by their student.
Family problems such as divorce may consume the individual and they may
not be very productive.
There are also other potential difficulties such as the supervisor goes on
long leave, or takes a sabbatical. Such a condition can take the supervisor
away from the laboratory for an extended period. Or it may be worse and the
supervisor may decide to change the University or leave academia and join
industry, or retire. While none of these are desirable for the students, these
can happen in the real world.
During your discussion with your supervisor, you should spell out the
problem as you see it clearly but without attempting to put the supervisor on
the back foot. Have a mature conversation and importantly, suggest a realistic
alternative option if the problem appears to be long-term. The alternative may
be that you spend more time with the second supervisor, or in the event that
things are really going bad, maybe change the supervisor. Or if it is possible
and you can manage, work independently. But ensure that when you go to the
supervisor and raise the issue, provide a solution. When the person is loaded
with their own problems, the last thing they need is yet another problem.
It is possible that despite your attempt, things do not work out and then
you have consider changing the supervisor which may lead to confrontation.
However, if you start the confrontation with your supervisor, you should have
a plan, and be aware of where it could lead. There is no point in getting into an
argument and come out a poor loser, while having annoyed your supervisor.
and in this situation it is a good idea to discuss it with the second supervisor
or politely invite the supervisor for a demonstration. Be assertive but not
aggressive and things generally work out.
in the local society. Often the issue may not be the supervisor, but colleagues
who may make statements on behalf of the supervisor.
In such a situation, it is best to first do a self-assessment and identify if the
concern raised are genuine or more often there could be a misunderstanding
on the part of the student or the supervisor. If you are convinced that the
remark was inappropriate, then let the other person know, preferably by email,
that you were uncomfortable with the remark. It is essential to do this with a
cool head and very accurately so that the message is very clear. Do not add
your emotions to the situation, but state that you were uncomfortable with the
remark. The email is useful as it makes the student think appropriate issue to
be raised, prevents any emotional outbursts, and is in the record which may
be required if this has to generate an official complaint.
The next step is to identify the frequency of these remarks. If it was a
relatively harmless remark made once in three years, or is it regular, or there
is a trend. If it is routine, or there is a trend, it is better to take a decision
sooner than later. Take the matter to the appropriate level and ensure that you
have all the proof and it is not a slinging match of ‘you said, I said’. And,
when in such a situation, be aware that it is very likely that the relationship
will breakdown and you should be prepared to find an alternative supervisor.
Students who may change their University or even city can be seen to have
the advantage of fresh start. However, they have the challenges of discovering
the differences between their earlier University and the current one. Not only
are the buildings and the city different, the attitude of the people and the rules,
both written and unwritten can be very different.
I believe that one solution is that the research proposal should be devel-
oped by the student and in close collaboration with the academic before
joining in as a student. In general, a few phone conversations can also be very
useful in testing the feasibility of the relationship. However, many times these
things may not be possible, such as when an academic has a scholarship, the
project needs to be started urgently, and the student needs that scholarship.
4.4 Networking
4.4.1 Networking with Other Professors
It is essential for students to network with academics other than their super-
visor. Make an effort to identify other academics from within the University
or from other Universities. It gives a wider perspective of research and
academics, while also enhancing likelihood for future employment. However,
it is important to be sensitive of the relationships between these academics
and the supervisor. There are personal or professional relationships between
two colleagues and these can help or harm the student. Often the supervisors
may be more insecure than the students would imagine.
When developing friends and networking with other academics, it is most
important to follow your instincts. It is also important to be transparent
with your supervisor and ask pertinent questions that can be helpful. You
don’t want to lose the trust of your supervisor, and the last thing you want
to do is to give your supervisor an impression that you are doing some-
thing behind the back. Be transparent and in most supervisors may be very
helpful.
take independent steps towards building such partnerships, and history has
shown that such partnerships may also lead to the personal income of the
supervisors.
Many governments, industry and Universities are realizing that there are
number of highly skilled but not very employable PhD graduates. They are
waking up to the need for supporting these highly educated citizens to become
useful in industry and in some countries, there is a trend for taxpayer funded
support to industry for employing PhD students to work for a short projects.
Such opportunities are beneficial for the industry that get an expert scientist
to work on their problem while the students get rich experience. It allows the
industry to undertake short-term projects and they get to observe a potential
future employee.
The candidates get an amazing opportunity to work in the industry and
observe first-hand the industrial operations and style. This may be to some
of the obvious differences between the University and industry such as the
time discipline, dress code, monitoring and reporting of the project outcomes.
They can compare their own capabilities on the industrial yard-stick but most
importantly they are able to see the real applications of their knowledge and
research. If handled well, this can give them the confidence and get them
job-ready.
Partnerships between university with industry will contribute to improv-
ing the learning experience of their undergraduate students. While in the
yester-years, the students were taught based on the expertise of the Professors,
it is now important for the students to gain from industrial leaders. Such part-
nerships lead to the industrial partners giving seminars, supporting student
projects and providing opportunities for student internships and placement
which are essential for the success of the University.
4.5.1.1 Expectations
A disagreement becomes a dispute when either or both of the parties have
strong expectations and these are being challenged. The underlying cause
may be an impulsive reaction or something that has developed over extended
period and many times the cause may appear to be very trivial. One per-
son may have a dispute with the other person due to two major reasons;
expectation of the other person or inability to accept a challenge to their
opinion.
When people have a strong expectation of the behavior of the other person
and this is challenged, the individuals may get very emotional and this would
lead to a dispute. Often the cause of disputes may be seen by the third party
to be trivial but the individuals involved in the situation see it to be very
serious indeed. One of the most important method of managing disputes is
to identify the truth of the seriousness of the situation; is it really something
worth getting upset about?
In the setting of a PhD student in a University, a typical example could
be if the supervisor has an expectation that the student will always come to
meetings at the time convenient to the supervisor, but the student is unable
to come for early morning meetings and this could lead to a dispute. There
could also be social expectations in certain cultures where the supervisor
may have expectation of student to demonstrate personal respect. While these
seemingly trivial matters can lead to major disputes, it can be easily managed
by either or both the parties. Changing the meeting time is often not too
difficult, and coming to the office early is also not impossible. However,
if there are genuine reasons such as the supervisor needs to go for some
other activity later, or the student needs to drop the kids to the school before
coming, then it is best that these are clearly communicated. Most people are
very reasonable when the reason is explained to them.
this expectation to the other person but assumed that the other will know
about it. There can be number of reasons for this such as difference in culture,
or the individual style of operation.
I remember one of the very bright and hardworking student who started
slipping, and missed deadlines. When I asked, there was no response, and
finally one day there was an emotional outburst. I had no idea what had gone
wrong, and it took me a significant effort to find out that it was a breakdown
of his relationship with his girlfriend who was also the breadwinner. The
student expected me to have the sixth sense to understand this, but I was too
involved in other issues to take any notice. In general, it helps to be direct and
communicate.
It is essential that there is regular and open communication line between
the supervisor and the student. Clarifying the expectations on either side
goes a long way to making friends and preventing enemies. Often we do
not speak out with the hope that the other person will somehow understand.
It is essential to realize that any two people perceive the same situation very
differently, and have different circumstances. Thus, what may be usual for one
person may be catastrophic to the other. This happens in all relationships, but
in a supervisor to student relationship it can cause significant damage because
it is difficult to quickly get out of it.
Despite good communication, there are times when two people may find
it very difficult to work together. In such a situation, it is essential to identify
and write down the real problem and real options. Once on paper, it is easier to
judge these more objectively, design the strategy and develop the plan going
forward.
someone the student know well, or it may be because the student is keen
to maintain professional distance from the supervisor. Irrespective of the
reasons, the student always has the right to tell the supervisor to conclude the
topic. However, if this is done aggressively, and the student challenges the
situation or asks the supervisor to keep quiet, it will lead to an uncomfortable
situation. The other extreme is to communicate passively where the student
does not tell the supervisor to end the discussion but is not comfortable.
It is important to be mindful of the situation of the supervisor and
identify the cause of this outpouring of emotions or information. The response
from the student will depend on the actual circumstances and historical
relationships. However, it is essential to be polite and mindful of the supervi-
sor’s situation. Politely requesting the reason for the question can generally
be very helpful. The most appropriate response may be to remind the
supervisor of the lack of your experience in such situations. Sometimes,
the best response to communicate in such situations is to listen without
saying much.
Tasks
1. Write down (in confidence) what are your expectations of your super-
visor? Are they realistic?
2. What do you believe are the expectations of your supervisor? Are they
realistic?
3. What if any are your issues with your supervisor? Can these lead to
conflict with your supervisor?
4. How well do you communicate with your supervisor? How exact does
your supervisor communicate with you?
5. Is there clarity of the purpose of a meeting? Is there an agenda?
6. At the conclusion of a meeting, do you feel confused or is there clarity?
7. Write down your interpretation of the terms; assertive and aggressive.
When are you assertive, aggressive and passive?
5
Responsibilities of a Researcher
Abstract
Researchers are often those who were the best and most curious students
in the University. The start of PhD is their first step in the long journey
towards becoming professional researchers and scientist. While other people
have to do work that are repetitive, researchers have the luxury to sit and do
interesting things while getting paid.
Most scientists, researchers and artists are going to live simple lives
because they will never make big buckets of money. However, even the small
amount that is the typical wage of a researcher requires justification to the
agents of the tax-payers. They are responsible to the taxpayers, but also the
global community, the localized society, and to themselves. What is essential
is that they get trained to be independent thinkers and researchers while
working in teams towards the social benefits.
5.1 Introduction
Scientific, medical and social discoveries have resulted in amazing inven-
tions which distinguish our modern society from the traditional societies.
Researchers have delivered many new gadgets, facilitated us to live long
and productive lives, and propelled us to this new and amazing world where
we can reach the moon and hope to touch the sun. However, we have also
created many new problems on the way. Now it is our responsibility to better
understand our physical and emotional world, and learn from history with
improved tools and devices. Thus, we researchers have significant challenges
ahead of us and these will keep us occupied for very long time.
All major discoveries and inventions are met with resistance without fail
because these are changing the earlier beliefs and conventions. To quote
the famous English philosopher, Bertrand Russell, “Conventional people are
55
56 Responsibilities of a Researcher
5.2 Accountability
5.2.1 What Is the Need?
The employers of the researchers are institutions such as the Universities.
They have an obligation to ensure that their employees are performing
appropriately: research projects or training of the students. However, the
difficulty is in defining and quantifying the word; performance. Unlike many
5.2 Accountability 57
It is impossible for any single person to be unbiased and an expert even across
the range of different topics within a single field. The only real option is to
get independent peers to participate in the review process. Ideally the people
who would be reviewing the work would be independent of the authors.
While this is highly desirable, it is often impossible to achieve this because
many scientific communities tend to be relatively small, especially within
national boundaries. However the strength in peer review process is based
on the inherent nature of scientists. Scientists have been trained to be critical
thinkers and are inherently critical of the work of other people. This helps in
the evaluation process where the peers identify all the possible errors in the
submission.
The critical nature of the reviewers and comparing the scores of multiple
reviewers in general is an effective method for identifying the strong candi-
dates and suitable projects. However, everyone realizes that this process is not
perfect; there are many imperfections, and it is important that as an applicant,
the setbacks should not be taken personally. As a researcher, it is important to
learn to use the reviewer comments to improve the submission for the future,
but not get disheartened. You also have to learn to filter and ignore what you
understand are incorrect comments. It is beneficial not to be dismissal or too
sensitive, but use the peer review process to your advantage, knowing that it
has number of flaws.
5.5 Publications for Spread and Growth of Knowledge 63
and research impact, it is not unthinkable that some people may try to
publish incorrect or irrelevant work, and this makes it difficult for the reader
to identify work that can be the basis for further research. It is essential
that researchers trust the publications in a journal. For this purpose, it is
essential that there is the credibility of the journal and this is developed
based on unbiased and expert opinions which are sought from the peer
reviewers.
The other difficulty is the time commitment by the reviewer for the
assessment of the submission. It is not uncommon that the reviewer spends
insufficient time for participating in the rejection/selection process and this
can reduce the effectiveness of the review process. The devil is in the detail,
and when the review process is done in a hurry, the subtleties are missed.
In most cases the review process is unpaid and unrewarded and the time
spent by the reviewer is personal and often very brief. It is in this short
time that the manuscript has to catch the attention of the reader, prevent
the reviewer from finding any mistakes and appreciate the outcomes of
the work.
The review process is designed to prevent bias and prejudice but despite
the efforts of the editors, there may be prejudice and bias due to the reviewer’s
personal research ideas. When we are conducting research, there are bound
to be differences in opinion and if the reviewer has strong differences to the
manuscript which can lead to unfair criticism.
The name and affiliation of the authors can influence the decision of the
reviewers. One difficulty is that the reviewer may also use methods (often
unethical) to assess the manuscript such as seeing the author’s profile on
websites such as Googlescholar or Scopus. This can lead to unfair biases
and prejudice people who do not appear to have a significant record of
accomplishment.
Tasks
1. Do you believe that it is appropriate to measure research success by
counting publications or citations?
2. What do you believe should be the best method for measuring research
outcomes?
3. How would you compare different researchers? How will you determine
who should get an award?
4. Have you reviewed any manuscript for a journal or conference? Were
you given any guidance of the process?
5. Should researchers be accountable to the administrators of your Uni-
versity or similar institution when they do not have the expertise in the
field?
6
Continuing to Be a Researcher: Motivation
Issues for Researchers
Abstract
After initial enthusiasm, many researchers feel disheartened. During under-
graduate studies students are expected to attend regular classes, submit
assignments and take exams and these force discipline. However, the research
degrees offer greater freedom and flexibility. While this freedom is an essen-
tial component of research, it can lead to delays and chaos, leading to drop
in motivation and heightened stress. This state is so common that it now has
a name; ‘mid-candidature blues’. This chapter explores some of these issues
and suggests methods to prevent getting in this state.
6.1 Introduction
Many of us researchers start our projects with enthusiasm and vigor. There are
new ideas, there is the desire to make a difference, and wish to climb moun-
tains that have never been climbed. We are confident that we will be changing
the world, becoming the biggest name in science, soon be head-hunted by all
Universities and then heading the largest technology conglomerate the world
has known. And even if that is not the purpose, just the charm of the new
problem, new ideas, and new facilities may be exhilarating and make us very
excited. However, soon the routine hits and every day seems to merge with the
next. The new ideas have now become old, and the details of the experiments
are quite exhausting. And to top it all, things do not seem to go the way we
had planned.
At the start of the research project and research studies, we lack the
experience rarely know what to expect and do not understand the research
process. The trigger that may have started us down this path could be very
personal and range of reasons very diverse. Perhaps someone in the distant
67
68 Continuing to Be a Researcher: Motivation Issues for Researchers
family had a PhD and seemed to be doing exciting things, or the title of
Doctor seemed to be important.
This positive note for research may continue when we join the University.
Often the supervisors may have been very caring to their new students and
everything felt so good. Our friends, and even our supervisors supported
our belief that we were brilliant, capable and special. We were expecting to
be doing some exciting experiments and working in high-tech laboratories.
However, soon the honeymoon may be coming to an abrupt end and we
realize that things are different.
Very soon we realize that our supervisor does not have large amount of
time or patience for us. We are not the super bright kids we thought we were,
and we may not even have a proper desk, or access key to a simple laboratory.
It also becomes clear that we lack many essential skills and knowledge and
things that appear to be simple require attention to complicated looking
equations. While we had passed our exams with flying colours and were
at the top of the class, we find that we are unable to respond intelligently
during our meetings with the supervisor or other members of the lab. We may
have known how to solve many equations but are unable to understand the
significance of these equations.
The end of the early euphoria and the honeymoon period wakes us to
what appears to be the cruel reality with hurdles everywhere. However, we
learn to cope and most of the early blockages appear to be manageable. We
confidently are able to overcome these difficulties to start our research journey
in true earnest. By this time we have reconciled to the fact our work may
influence total of ten people in the world. We have also accepted the reality
that there are many shortcomings in our own knowledge and limitation of the
available resources. Time appears to move very swiftly and we end up doing
some experiments and early stage analysis. Things seem to be going well and
on track. By now, research has become a routine affair with few challenges
we cannot surmount, but there are no new creative ideas that are coming out
of our heads. It soon starts to feel like a routine job, but with less money and
no corporate job structure. And then it sneaks in and before we know what
has happened, we are now feeling confused. No longer is there the desire to
come in the morning, nor the fun of celebrating the week on Friday evening.
One day, while walking down the street we notice that our colleagues
from the undergraduate days are enjoying fancy dining or cafes. These are
the students who were at the bottom of the class and barely passed the exams.
These are the people who are now driving fancy cars and wearing trendy
clothes while all we can afford are unbranded jeans and the train ticket. Our
6.2 Mid-Candidature Blues 69
colleagues from school sit in fancy cafes discussing the latest films or about
possible promotions and new job opportunities, but we are thinking of the
lengthy equations or the data management. And, then nothing seems to be
happening, with every day being dreary and dry, similar to yesterday and
tomorrow. We had thought of the grand celebrations of solving the world’s
problems, but here things are looking really slow and uphill. Just if we could
invent the time machine, we would go back in time, not enroll in the research
degree and go to industry. But alas, if we could build the time machine, we
would be famous anyway and we would not need to go back and make any
changes.
not the only one. However, having a better understanding will help us from
feeling stressed and it is useful to explore the reason for this change in our
attitude towards our research.
When we begin any new endeavor, there are doubts and uncertainties,
but there are also the thrills and challenges. While there is the fear of the
unknown, being selected to join the elite group gives a sense of fulfillment
and along with that is the adrenaline rush for doing something purposeful.
However, like always the devil is in the detail, and soon comes the realisation
that most of the research tasks are repetitive and appear to be mundane.
The reality is that most people who start their research degrees do not
understand the details of what we will be doing during the next three or
four years.
There is large variability between individuals and situations, but we
soon realise that the reality is that most tasks are repetitive and not very
exciting. Many of us may feel uncomfortable and question the wisdom of
becoming research students. When this happens, we may have the feeling of
helplessness and loneliness. We may find that there is no one to go to because
the experienced researchers such as our supervisors may appear to ignore
our emotions, and seem to lack the required interpersonal skills. One of the
obvious mechanism to cope with the problem is to play the blame game,
and in this situation, blaming the supervisor, the laboratory or the University
seems very logical. However, while blaming the supervisor or the laboratory
is convenient, this does not resolve any problem. The answer is something
which is intrinsic to us and what we can do quite easily. The next few sections
explore the possible causes and suggest methods to ensure that the time as a
research student is productive.
When the outcomes are different from what we were hoping for and
expecting, we may feel confused and disheartened. We would be unsure of
the next step and may wonder if the project should be discontinued and is
dead and gone.
Such confusion may also happen when things are going exactly according
to plan; we may still be confused. When the project is going according to
plan, the activities can soon become repetitive and there appears to be lack of
challenge. People who are seeking excitement may soon find it to be boring,
without competition and too routine.
One of the biggest difficulties that associated with research projects for
PhD students is that the significant outcomes are only realizable after a
significantly long period such as three years. This period is long enough for
us to lose the focus and we may forget the actual purpose of the journey. We
struggle to reach our office in the morning, and are confused of our progress.
The mundane starts creeping in and we begin to develop distrust of people
around us, especially the supervisors. When we have lost the focus, we may
start considering that the project is a waste of time and effort. We simply seem
to just plod along, with one day fusing to the next. This can be irrespective
of the results being as expected or otherwise, and our manuscripts being
published or otherwise. If things go according to plan, there is no challenge
and the work appears to be irrelevant and trivial. If the reverse is the case, the
world appears to be stacked against us.
The good news for all the researchers is that this is a very usual and
perhaps natural phenomenon. Thus take comfort in the fact that we are neither
to be blamed for feeling miserable nor we are alone. Having accepted that this
is nothing unusual, it is then essential to identify techniques to help us tide
through the period. However, some supervisors may not seem to understand
this state to be natural and may not be very accepting. The problem may also
be complicated if the student is unable to accept it to be a natural progression
and become very serious about it.
The following section describes some of the methods that may be useful.
These are not to be considered to condone any inappropriate behavior; of the
supervisors or the student. It should also not be considered as an alternative
to seeking professional help if required. The section is suitable for the PhD
students and their supervisors to help better understand the issue and suggests
some mitigation strategies. However, this is very general in nature and not to
be considered as professional advice.
72 Continuing to Be a Researcher: Motivation Issues for Researchers
All of us have our personal preferences and style, and we tend to gravitate
towards and interact with people that we are most familiar and comfortable
with. However, this may not be suitable for the student or the supervisor or the
project and hence a successful supervisor needs to evolve with the student. I
have found that when our observations are kept in the head, we soon forget
the reality and find excuses. Thus, it is important for the supervisor to observe
and write down their observations of the student in a safe place, and develop
methods that may be used to encourage them. In parallel to recording the
progress in their field of research, it is also essential to make a note of their
style of operation and what may the best way to motivate them. Besides
helping the students, this will evolve the supervisor to becoming a leader.
on the back is always good, when we are self-motivated, we do not even need
any acknowledgment from others. We will be happy to work for the pleasure
of the work without needing to win a competition, and will be competing with
our own-selves. When we are self-motivated, we are relatively stress-free as
we do not need any reward or victory.
The next state of being is when we are active, but active for the sake
of a reward. This is the most common state for professionals and when we
are in this condition, we are ready to compete with our neighbours. We
are continuously seeking rewards and acknowledgement and this makes us
stressed. A person in this state needs to be shown a carrot and we will
chase it. The person in this state will appear to be like the hamster on
the wheel, and will be in the state of hyperactivity and stress can be our
hallmark.
Then there is the state of inertia, where we want to do the minimum and
procrastinate. We will hesitate to take decisions even when overdue and be
lazy. We feel tired, exhausted and grumpy and not willing to try anything
new. We will not even be greedy and prefer sleep to a bigger pay-packet and
perhaps will be driven only by fear. Someone should tell us the specific tasks
to make us do something useful and we may respond to stick than carrots.
Simply put, in this state we are lazy and will find all excuses to condone our
laziness.
quantify and measure. Clear your desk, do your filing, manage your computer,
whatever that needs to be done without requiring you to think and plan. In this
state, thinking or planning will not happen, but procrastination will.
These are the days when not only we are not productive, even our
environment seems to be against us. Things go wrong in our experiments,
the telephone stops working and virus attacks the computer. In simple words,
the world seems to have ganged up against us. We simply wish that the day
would be just a bad dream. But it is all real, and things seem to go from bad
to worse.
Many times it is possible to associate some event to our state. It may be
the monthly cycle for some people, or problems at home or the supervisor
or the equipment. Or simply the luck factor or whatever you can find to
blame. However, many times it is not possible to identify the cause of this
which can make us even more miserable. Often it can lead to the feeling of
guilt and despair. The reality is that we are in this condition, and trying to
find someone or something to blame is not going to help. We have to face
the reality.
and it will soon end. Just like it often comes without notice, it also goes away
without any logic or reason.
It is the next step that is the most important one. Open your research
plan and identify what you had planned for that day or week: be dogmatic.
Identify all the activities that are measurable and routine; ones that you can
perform without requiring creativity, thinking or planning. If you are unable
to find something in your research plan, there will always many such tasks
which you would have postponed, such as managing the folders and files,
clearing your emails, or simply cleaning up the lab and making some space.
All of these things are important and necessary, and can often be done without
having the zeal and full attention.
Undertaking serious literature review will not be a useful exercise and
we may discover after 5 hours realizing that we spent the time reading some
celebrity gossip column. This is the time when you should not plan or think,
but just do the simple, bull-work. Try to avoid going to read the online
newspaper or doing some searching on the net because you may find that
you get hooked into an advertisement and time will fly you by.
The next step is to identify your actual progress. In most cases, we would
have done significantly more than we realize and things will not be as bad as
we may have it in our head. Open your research plan and identify your actual
location on this chart. Observe all that you have achieved and if you forgot to
do that earlier, tick the boxes against all you have done and achieved. Do not
hesitate to pat yourself on your back.
If you think that this state seems to becoming longer or more frequent,
it is now a good idea to discuss this with someone whom you can trust. In
the ideal world, your supervisor should be a person who should be able to
help you and guide you through this ‘low cycle’. However, for your own
good, find someone whom you trust, who is not a relative and to whom you
can download your feeling low. And remember, do some action, preferably
something physical when you are feeling low and down.
When they have a focus, they will be the assets to the laboratory while when
they lack direction, they would be playing politics and become the nuisance
to the place. They have the energy but need direction.
The first indication of this state is that they are restless, stressed and
appear to be in a hurry. They are keen to start the experiments without
planning the details, and start the analysis even before the data collection
is complete. Often they will want to start the work without detailed literature
review or in-depth understanding of the problem.
People in this condition could be described by phrases such as ‘the
hamster on the wheel’ or ‘a headless chook’. They simply are keen to be
busy, even if there is no one else is watching. The intent is to be busy and
be ahead of the pack. However, they may not have a focus and direction, will
be stressed and often they will appear to be causing discomfort to others and
themselves.
This state can be very useful if their energy can be appropriately chan-
neled. However, people in the high energy state need to appear to win
competitions and get acknowledgment with a pat on their backs. They need
to work towards some future reward and need appreciation; they need the
carrot to run after. This is the condition where an earlier documented plan
can give the focus and direction, and engage positively when they achieve
the milestones. When in this active state, the student should keep their eyes
on the milestones and ensure that they are ticking the boxes when these are
achieved.
The supervisor can participate with the student to improve their producti-
vity by celebrating the achievements. Another factor that should be
considered is that when the student is highly active, it is best not to make
any major change to the direction. Micromanaging such a student and looking
over the shoulder of the student may be counter-productive. Recognizing their
achievements and their success in the milestones can be helpful and give the
students the extra boost. It is also useful to discuss their future milestones
which will keep them focused. Students and researchers in this state only
require focus and will chase the milestones without requiring any push or
reminders from the supervisors.
A well-defined plan that highlights the milestones can help the students
to be productive and focused. Students will typically focus on their short-
term goals and celebrating their achievements will be very helpful. Thus, a
research plan is an important document for students to be productive when
feeling restless and active.
6.5 How to Motivate Yourself? 81
These are times when the students and researchers can feel the creativity
coming from within. They can see details, identify things that they could not
notice earlier and they are at their creative best. In this state, they may not
need external drivers to push them and the drive and satisfaction is internal.
Often, they will compete with themselves and not with others.
We can identify this state when we feel comfortable with our self. How-
ever, while we may be confident in our research, not all aspects of our life may
be going smoothly. While things may not be great in all fronts, the research
may be focused. When in our creative state, we are relaxed and confident
without being restless and competitive, nor wanting to be lazy.
The state of creativity is most suitable for planning, new ideas, to
get a fresh perspective on some experimental outcomes or taking another
interpretation of the literature. While this condition may only be short-
lived and hence it is a good idea to take down the notes of the ideas and
plans. This is the time when there is no need for any monitoring, acco-
lades or awards, and is the perfect time to visit the plan and make changes
if required.
At this stage, decompose the large tasks to small chunks, things that
can be done in a month, a week or even a day. Look for clues to show
you what would be the outcomes of each of the tasks and identify your
short-term goals. When you are feeling down and dull, it is these list of short-
term goals that will get you started and make you become productive. These
short term goals will provide the focus when it appears that things are going
everywhere.
Tasks
1. Do you work best (1) under pressure, (2) when there is a reward or
(3) because you enjoy the work?
2. Identify the kind of person you are: restless, lazy or chilled?
3. Would you continue to be a researcher even if you won a very big
lottery?
4. What are your levers? What are the circumstances that make you get
angry? What makes you feel happy? Write these down and save it
securely.
5. What are your long-term goals? Have you thought about them?
7
Research Proposal
Abstract
There are many myths which suggest that major discoveries are an outcome
of spontaneity of an individual genius. However, reality is very far from this,
and successful research outcomes are based on rigorous planning, discipline
and teamwork. Successful research student requires to spend significant time
in evaluating the work of others, identifying the problem, designing an
alternate solution, recognizing the hypothesis, developing the tasks against a
time frame, conducting the experiments and finally undertaking the analysis.
When researchers in their excitement start their experiments a little too early
without adequate planning or literature review, things often go wrong. Careful
planning of the research and communicating this with others such as your
supervisor is an essential aspect of research and this document is referred to
as the research proposal.
Research proposals may be written for diverse reasons. A PhD student
may write a brief proposal to declare their intent and the topic of interest
to find a suitable supervisor. A formal research proposal is submitted after
they enrol in their PhD program and this is expected to be detailed with list
of tasks and milestones. There are also the research proposals that would
be submitted when applying for scholarships, grants or employment. This
chapter describes the reason and the process of developing a diverse range of
research proposals.
85
86 Research Proposal
7.1 Introduction
English language is contextual language and hence I start this chapter by
defining the word, research in the context of this chapter. While there are
number of usage of this word, one definition that is relevant to this chapter
is given by Creswell who described it as “A process of steps used to collect
and analyze information to increase our understanding of a topic or issue”.
Based on this, it can be considered to have three distinct steps: identify the
question (or issue), data-collection to answer the question and analyse the
experimental results to answer the question.
Researchers or artists appear to have the luxury of ‘sitting around’ and
sipping cafe lattes, and some people from the corporate world may even
consider them to be bludgers, idle and not carrying their weight. However,
if it was not for the thinkers of the society, we would still be living in
the remote past. Bertrand Russell, one of the pillars of western philosophy,
in 1935 wrote his famous essay; “In Praise of Idleness”. In this essay, he
describes the necessity of people to have time to think and reflect rather
than perform work such as the task of moving objects in space, or in today’s
style of controlling a computer. He shows that such time is necessary for the
purpose of developing new ideas, and scientific discoveries. It appears from
some of the letters exchanged between Russell and the scientific greats such
as Einstein that these ideas were considered important and the backbone of
the progress of humanity not only by philosophers but by scientists. However,
in casual reading of the essay it is very easy to be confused and interpret it to
be the justification of laziness. A careful reading of Russell’s essay suggests
the need for planning, focus and dynamism.
a state where the individual is able to be creative and generate new knowl-
edge. This gives an opportunity for clear thinking, and requires careful
planning. It is essential to realize that the state of seeming idleness does not
produce any useful outcomes if it is not fueled by dynamism and planning.
Bhagavad Gita describes that there may not appear to be any difference
between a lazy person and a philosopher (Tamasic and satvic) but for the
inner dynamism. For the seeming idle person to achieve any outcome, it is
essential that there is dynamism; a plan and ideals. Seemingly unplanned
artist would have a definite plan and purpose; a vision of what they would
like to communicate in their masterpiece.
Dynamic researchers require a plan that will guide them to their goal.
While a student who is studying and doing courses has a plan that is
developed by the University, researchers have the serious responsibility for
developing their own plan. The plan by creative artists or researchers may not
be similar to the one by industry or a business, or even that of a course in
the University, but having a well-defined plan is important for their success.
However, research plans need to be flexible and dynamic where not only
the path but even the goal-posts need to be readjusted over time. Having a
detailed plan serves number of purposes and the most important purpose of
these plans is for providing the individuals the ability to monitor their own
progress during the dynamic idleness.
The next step in developing the project proposal is to identify the purpose
of the project. Who will benefit from the outcomes, who is the reader of the
document, and what is its purpose. The following text describes the process
of developing the research proposal. While the process is generic, the aim
is to facilitate the PhD candidates who are developing their formal research
proposals at the early stage of their candidature.
In general, research proposals of PhD candidates is written for their
supervisor and the research committee. The committee will be broad based
and it is a good idea to provide the background, but without making people
think you are running a tutorial. You need to communicate to them without
appearing to be talking down to them. While they may not know your
topic, but they will be experienced researchers and have seen many research
proposals. They also have easy access to the internet and have the authority
to ask you to explain.
7.4.1 Title
Many times people write the title at the last minute and pay little attention to
this. However, the title is very important because it is what the other person
sees before they begin to read the details, and if this is not interesting, the
reader is already in the negative gear.
I would recommend to the author of the proposal to put themselves in the
shoes of the reader of the document. Imagine who would be the reader of
the document, mentally develop a rapport with them and get them interested
in your work. Try to understand their purpose of reading the document,
the amount of time they will most likely devote to the document, and their
keenness. If it is possible, read the proposals of other people and observe the
time and patience you have for their documents.
7.4.2 Aim
The proposal needs to have a well-defined aim. Often in the first draft of
the proposal, this may be vague but it should get well defined over multiple
iterations. When you start your first iteration, this may simply be the penning
down the wish-list based on the dialogue between the supervisor and the
student. This will evolve over multiple iterations and may be significantly
different from where you started.
When considering the aim of the project, it is essential to identify what is
the purpose of your research. Please do not try to solve the world’s problem
7.4 Developing the Research Proposal 91
nor should you sound like the used car salesman. The biggest beneficiary of
your research proposal is your own self, and you should believe in your ability
to achieve what you have stated. Being direct and to the point is generally
good; be crisp, precise and articulate the aim clearly. Do not expect the reader
to read between the lines on your behalf.
7.4.3 Objective
Many formats will have the aims and objectives placed under one sub-
heading, but I have separated the aim from the objectives. The aim can be
generic and often a string of key-words and occasionally even a motherhood
statement (not advised), but the objectives of the research should narrow
down to the precise research outputs you hope to achieve. So, while the
aim of the research may be to identify early symptoms of lung cancer, the
objective may be to investigate the difference in the speech of healthy people
and people with early stages of lung cancer.
7.4.4 Scope
It is essential to scope a project because no one can do research without
boundaries. The purpose of scoping the project is to identify the boundaries
which is an essential part of the research proposal. While the overall study
by itself may be very big, scoping identifies what you will explore in this
proposed study. It also states what you will not be doing and clarifies the
problem statement for your own self and the audience. It is necessary to
identify and declare the extent of the problem that is relevant to your work.
This declares what you would be actually doing, and also states what is not
within the scope of your work.
Research project for PhD is time-bound and needs to declare the end
clearly. It is essential for PhD students to recognise their progress and when
the project has been completed. Having generic aims that are not scoped is
not appropriate and it is essential to determine the specifics that are expected
be achieved.
It is important that the scope of the project is narrow but gives room for
future changes. If it is too narrow, the outcomes are highly limited to specific
conditions and thus the work may not be very useful. If on the other hand
it is too wide, effective research may not be achievable. A careful balance
between the two is very essential.
Scoping of the research declares the intent and choices made by the
researcher and the boundaries for the proposed study. It is essential to do
92 Research Proposal
this prior to developing the methodology as it gives the focus to the project.
It also identifies the responsibilities of different individuals in a project when
there are multiple stakeholders.
1. Is there a difference between the Now let’s consider the 1st question: Is there
speech of healthy person and a difference between the speech of healthy
one with lung cancer? person and one with lung cancer? This
question is too wide and does not appear to
be focused. It seems to suggest that the
author has not done sufficient literature
review.
2. Can we find the difference in the This question just does not sound correct
speech of healthy person and because it is subjective. The question has to
one with lung cancer? be objective and should not be based on the
individual. The other difficulty of this
question is that it is too generic and its
answer would not have great value. Yet
another difficulty is that it would not be
possible to come up with a precise
methodology for this question.
(Continued)
94 Research Proposal
Continued
3. How to detect the difference This question is too generic and shows that
between the speech of healthy the author is unsure and does not know what
person and one with lung to do. It appears that the candidate has
cancer? converted the aim into a question without
detailed literature review and planning. It
does not provide the focus to the project
and seems to indicate a fishing expedition
in the dark.
4. What is the difference between This question lacks focus and would not
the speech of healthy person and guide the researcher for the research. To
one with lung cancer? respond to this question, the candidate
would need to test all possible speech
analysis algorithms on the data base and
even then the answer is not definite, because
there may be differences that the known
techniques do not show.
5. What features of the speech are This question is too generic and does not
suitable for distinguishing indicate that the candidate knows where to
between the speech of healthy start. If this was the question to work with,
person and one with lung how would the work start? To effectively
cancer? respond to this question, the candidate will
need to analyze all the speech recordings
using all possible speech analysis techniques
and then test the results for the difference.
The question does not focus the research and
hence is not an appropriate research
question.
6. Is there a statistically significant This question is focused and the researcher
difference in the periodicity of appears to be committed to the project.
the speech of healthy and lung The researcher has declared the analysis
cancer patients observable in the technique, the database and the method to
public databases? observe the difference. It indicates that
significant literature review has been
performed and based on earlier work, the
researcher has got a logical basis for the
research. However, it is also important to
be aware that the validity of the question is
based on the demonstration of the logic
and knowledge that underpin the details.
7.4 Developing the Research Proposal 95
responsible for its integrity and you should know the details. Just because it
is a public database does not remove the onus from you.
An important aspect of the methodology is to provide the details describ-
ing the data analysis. This could include the statistical analysis but different
disciplines may have their own data analysis techniques and preferences. It is
not only essential to describe the analysis method, but to provide the argument
for the choice of the method. While there are significant differences between
disciplines, some of the basic criterion are regarding the significance of the
results. It is important that the outcomes are not random but reproducible and
this means that the output of the data analysis should clearly state the level of
the significance. More details on this topic are covered in Chapter 8.
and should be things that you can manage largely yourself. This is important
because otherwise our minds will begin playing the ‘Blame-Game’ and the
purpose of the plan is lost.
There is no point in having the timeline for ‘reading papers’ but be
specific about how many papers you will critically evaluate over the period
of time. If you are conducting experiments, try and quantify the number of
experiments you will conduct in a given time period.
that these are well-thought through. I would always recommend that when
making these changes, discuss this with your supervisor. However if you are
uncomfortable to discuss this with the supervisor, do it with a colleague you
can trust and who understands the project. Write down the reason for the
change, even if it is as obvious as travel to a conference, breakdown of the
equipment, too many parties in the week or that you needed to take the extra
tutorials for the supervisor. When you write these down, you are able to take
control of the project and it will not slip away.
Treat the timeline of the research proposal with respect. It is the most
important document you will work with, and if you follow this closely, you
have strong likelihood to becoming a successful researcher. If you trust a
colleague, share it with them so that you can share the celebratory drink for
each successful milestone.
7.4.9 Milestones
Milestones are the anticipated measurable outcomes at specified times that
help monitor the research progress. These provide the researcher with the
short-term targets and provides means to check the plan and make appropriate
changes to fine-tune it if required. It may be also useful for the supervisor who
may use it to observe the progress of the student. However, its main purpose
is to reconnect the researcher with the aim of the project and keep in focus the
long-term goal of the project. This is very important because most research
projects can mid-way become monotonous and one day appears to merge
with the next. Having clearly measurable and periodically timed milestones
that remind you of the long-term goal of the project ensures the focus and the
drudgery is avoided.
Milestones are not the outcome of the experiments but the measure of
timely and accurately performing the experiments. Research requires extend-
ing beyond the current knowledge and hence while the outcomes of research
projects can be anticipated but these cannot be predicted. The methodology
should have been well thought through and planned but the outcomes of the
tasks cannot become the milestones.
Tasks
1. Do you need to revisit your research proposal?
2. Write your vision of the research project and share it with your
supervisor.
100 Research Proposal
Abstract
Typical research projects have experiments and analysis as key components.
While many of these will require recording of data, some will be reliant on
the database generated by others. What is essential is that the outcome of
the research should be reproducible and verifiable. In most cases, statistical
analysis is performed on the results to test the significance of the results.
Planning to ensure that the results are statistically significant is an important
step in the design of the project. This chapter introduces you to this topic and
provides you with the basics that may be useful in the experiment design and
result analysis.
8.1 Introduction
Researchers perform experiments; in this context I use the word, experiment
in a very generic sense. Experiments are not only conducted by white gown
wearing scientists in their laboratories but also by people reviewing work of
other people or conducting interviews. An experiment is an act where the
outcome is not definitely known. What is essential is that the outcome of the
experiment gives a definite answer. Planning the experiment is an essential
skill of the researcher.
In many cases, the outcomes of the experiment are not definitive and not
black and white but all shades of gray. Another difficulty with many experi-
ments is the repeatability and reproducibility. Good experimental planning is
key to ensure that we understand and convince others of the significance of
the results and understand the limitations which would lead to suitable appli-
cations. This chapter discusses some of the facets of experimental design, and
while it is generic in a sense, it targets engineers and scientists.
101
102 Planning the Experiments
8.4.2 Dispersion
This is the measure of the spread or distribution of the values around the
central tendency or value. The two common measures of dispersion are: range
and standard deviation (SD). While the range is difference between the lowest
value from the highest value, standard deviation is an estimate of dispersion,
which shows the relation of the set of data values to the mean of the data set.
One significant weakness with the use of range to describe the dispersion is
that it is very sensitive to any outliers.
8.5 Significance
In most natural science and humanities experiments, the outcomes of multiple
repetition are never identical. However much we may try to control the
conditions, there are large number of variables that are outside the control
of the experi- menter. While there may be common trends between multiple
experiments, there may be large number of variations between the results. In
general, what is important is the trend and not the individual differences. To
identify these trends while ignoring the random-like variability, it is essential
to repeat the experiment multiple times. This will reveal the differences to
ensure the observations are not because of inherent variations but are based
on real effects.
104 Planning the Experiments
probability of rejecting the null hypothesis given that it is true (a type I error).
It is usually set at or below 5%.
rejection region for a two-tailed test. It is important to note that the one-tailed
test is only more powerful than a two-tailed test if the specified direction of
the alternative hypothesis is true.
Effect size is a measure of a study’s practical significance based on the
number of examples. A statistically significant result may have a weak effect.
To gauge the research significance of their result, researchers are encouraged
to always report an effect size along with p-values. An effect size quantifies
the strength of an effect, and measures the distance between two means.
One measure is Cohen’s which is the difference in the mean divided by
standard deviation which helps normalise the difference. Other measures
include determining the difference in the correlation between two variables
or its square.
While the statistically significance is a measure of the significance, how-
ever result may not always be easy to reproduce. Further analysis are essential
for this purpose.
8.8 Reproducibility
Replicating an experiment, or reproducibility is the ability of an entire
experiment or study to be duplicated, either by the same researcher or by
someone else working independently. This is the fundamental pillar of scien-
tific method and anything that is not reproducible can be considered for being
discarded.
A well-designed experiment should be repeatable and reproducible. Such
an experiment would have suitable sample size and include all the reported
parameters that can influence the outcome of the experiment. While the
repeatability of the experiment is tested when all the conditions are the same,
the reproducibility is regarding arriving at the same conclusion. Two well-
informed experimenters should get similar results (not same) but be able
to reach the same conclusion. For the experiment to be repeatable, it is
essential for the experimental methodology to describe all possible details
of the experiment.
8.11.1 Correlation
Correlation defines statistical relationship between two sets of data samples
by quantifying the degree of extent to which they have a relationship with
each other. This value is called as correlation coefficient, and usually takes
a value between 0 and 1, with 0 showing no linear relationship between the
two sets of data samples and 1 showing the highest degree of relationship
between them. The most common correlation coefficient used is Pearson’s
correlation coefficient which measures the linear relationship between two
sets of samples.
8.11.2 Regression
Regression Analysis establishes the relationship between two sets of data
samples by fitting an ideal mathematical model to the data available, wherein
one variable (dependent variable) becomes the function of the other variable
or variables (independent variables). It is widely used for prediction and
forecasting of the data. The common regression methods are linear regression
and ordinary least squares regression.
110 Planning the Experiments
8.11.3 t-test
The t-test is a statistical hypothesis test which determines if the mean of
the two samples are “significantly different” from each other. Thus if the
mean of the two samples are significantly different from each other, the two
populations from which the samples are taken are also significantly different
from each other. The parameters that are considered for statistical significance
are the size of the difference between the mean of the two samples, the sample
size and the standard deviations of the groups. A t-test is usually applied when
the samples follow a normal distribution. The limitation of t-test is that it can
be performed for samples from two populations only, at a time. There are two
types of t-tests: unpaired t-test and paired t-test.
and false negative. True positive (TP) measures the fraction of positive
data correctly classified as positive. True negative (TN) measures the frac-
tion of negative data correctly classified as negative. False positive (FP)
measures the fraction of negative data wrongly classified as positive while
false negative (FN) measures the fraction of positive data wrongly classified
as negative.
With respect to the above example, the true positives would consist
of the fraction of data wherein the diabetic patients have been correctly
identified as diabetic, and true negative would consist of the fraction of
data where the healthy subjects have been correctly identified as healthy.
It might also happen that some of the healthy subjects would be classified
as diabetic, which would fall under the category of false positive, while
the diabetic patients wrongly identified as healthy would count in the false
negative.
Accuracy measures the fraction of the data that has been correctly identi-
fied in terms of the labels; positive and negative. While useful, this has several
shortcomings such as giving 100% accuracy if the new diabetic tests were
totally wrong.
Sensitivity of any test is its true positive rate (TPR), also called as
the recall, whereas the specificity of the test is given by the true negative
rate (TNR) of the test. Inverse of the sensitivity indicates the number of
positives that were missed, while the specificity indicates how good is it at
rejecting the wrong ones. The formulae of the above terms have been shown
below:
TP + TN
Accuracy =
TP + TN + FP + FN
TP
Sensitivity (T P R) =
TP + FN
TN
Specif icity (T N R) =
TN + FP
FP
F alse positive rate (F P R) =
TN + FP
FN
F alse negative rate (F N R) =
TP + FN
8.12 System Performance Measure 113
Predicted Conditions
Total Population Total Positive Total Negative
True Total Positive TP FN
Conditions (diabetic patients) (Type II error)
Total Negative FP TN
(Type I error) (healthy subjects)
P ower of test = 1 − β
healthy subjects and missing out the ones with mild form of diabetes, leading
to higher specificity and lower sensitivity) nor too low ((identifying more dia-
betic patients and missing out the healthy ones, leading to higher sensitivity
and lower specificity). However, in any case, the final outcome could either
have higher sensitivity or higher specificity.
Receiver Operator Characteristic (ROC) curve marks the tradeoff between
high sensitivity and high specificity by plotting sensitivity versus specificity
in a graphical plot, where each point of the curve represents a different
possible threshold value which defines the test result. The area under the
curve, also called as AUC, gives the accuracy of the test. AUC of 1 represents
a perfect and ideal test, and as the value of AUC starts to decrease, the
accuracy of the test also decreases, until AUC of 0.5, which represents a
worthless test.
Figure showing an ROC curve. The solid line shows the trade-off of the
sensitivity versus specificity. The dotted line shows the expected ROC curve
for a method that has no predictive value (e.g. flipping a coin).
Tasks 115
Tasks
1. Are you familiar with experimental design techniques?
2. Do you believe that there is any need for statistical analysis while
planning your experiments? Or is it required when you are analysing
the results?
3. Have other authors in your field presented statistical analysis when
presenting their work?
4. Do you believe that you can challenge the conclusion statements of other
papers? If yes, what types of statistical analysis could be useful?
9
Communication Skills
Abstract
In our world overloaded with data, and many communication options, it is
essential that researchers should master their skills to communicate with their
supervisor, colleagues, and industry. Good communication skills does not
equate to good language skills or oral wizardry but it is the ability to make
the audience understand the topic and appreciate the research outcomes. This
is an essential strength for the success of the project and for a successful
career in research. The fundamental strengths for a researcher to communi-
cate their research are based on effective transmission of knowledge to the
audience.
9.1 Introduction
Research is a creative profession and researchers are expected to explore the
unknown. While workers in industry have to work as members of teams,
many people in the creative sectors seem to be loners, enjoy solitude and have
the reputation of not always being communicative in the conventional style.
While they may not be very talkative, good communication is an essential
quality of a scientist.
The exchange of facts, ideas and opinions or expressing our emotions
is generally defined as communication. It consists of transmission of infor-
mation, ideas and thoughts. We communicate for number of reasons such as
to inform, influence, express feelings and perform social interactions. In the
context of a professional researcher, the purpose of communication can be
narrowed down to successfully transmission of facts, and influencing others
based on this information. Communication may be by formal documents
such as thesis, reports and publications, or relatively informal such as oral,
presentations and emails. This chapter addresses the later; oral, presentations
and emails.
117
118 Communication Skills
The next section of this chapter describes the necessity for researchers
to be effective communicators and methods for developing the skills for oral
communication. The following section explores some of the major aspects of
effective oral communication; planning, engaging with audience, listening to
the audience, assertive style.
but make them understand. The measure of good communication skills is not
the strength of the diction or the perfect grammar, but whether the recipient
understood. “Telling” is when the facts are spoken or written, but this need
not be communicated.
Language skills significantly improve the ability of the person to tell, but
communication is deeper than just telling. It requires understanding the needs
of the specific audience or recipients and clarity of the message. It is essential
that a precise message tailored for the specific audience is delivered for
making a specific impact. Ill-planned lectures, manuscripts, emails or tweets
not only waste the time of the speaker or the author but also the audience
or the readers. Most of us have had several experiences of the long windy
lectures and seminars that only serve the purpose of putting the audience to
sleep. It is important to learn from the mistakes of such people.
Now consider another situation where you meet your supervisor to dis-
cuss the outcomes of some experiments of which you have developed the
expertise. In such a situation, the expectations are very different compared
with your regular meetings. Here you are not expected to demonstrate your
work but present the results in the capacity of an expert. While it is not a
good idea to be arrogant, it is important to realize that you are the expert in
this context and have to communicate the experimental details, the results and
the observations which may be obvious to yourself but may not be obvious to
others.
using smart-phones. This technology can be used to monitor the gait of the
patients without them having to come to the clinic. They have also identified
and proposed a major application for their research which would be to predict
and prevent falls among the elderly and result in significant reduction in the
number of avoidable hospitalizations of the elderly.
The project was managed by the supervisor while a research assistant
used the device to collect the data from the volunteers and the PhD student
was responsible for the analysis. While the analysis technique was jointly
developed, the student worked very hard to write the software for conducting
the analysis which took a good part of 18 months. Obviously, the actual time
for the analysis when using the software was very short.
The student wants to focus the presentation on the development of the
software because that was what took the most effort. He is keen to describe
the earlier mishaps when the software was written in one language and
the advantage when it was developed in C++. However, the experienced
supervisor does not agree with the student. Why?
The audience are clinicians who are not expected to appreciate the fine
differences between different software languages but are more interested to
know about the clinical details of the patients and sample size of the data.
They know of the problem related to accurate gait data recording and analysis
without the subject needing to be in the clinic and they are keen to see the
actual recordings. The aim of the speaker should be to satisfy them with what
they will appreciate and not bother them with the difficulty in the software
design. Once they have been impressed by the outcomes, they may ask for
more details. The student may lead the audience to the questions for the
details rather than begin with those.
to other people and identify the mood of the meeting and their expectations.
It does not hurt to allow others to speak first and you listen. In any com-
munication, it is nearly impossible to totally change the audience opinions
and hence it is essential to estimate their stance and their level at the start of
the meeting. You will be wasting your time teaching fundamentals to experts
in the field and your talk will not be well received when you are discussing
concepts the audience do not have the understanding. It is essential that you
pitch appropriate to the audience.
There are some simple rules that can be effective in improving your
communication skills. If you are in a meeting and there are 4 people and you
are not in the hot-seat, then try and speak for less than 25% of the total time.
If it is possible, try and let others speak first so that you can pitch better. If
you are speaking to a larger audience and it is your seminar, try and regularly
observe the audience to see if you are causing them fatigue.
where a student comes to meet with the supervisor and begins by showing the
results of some experiments. The student has made the effort to prepare the
slides and was very focused, but did not consider that the supervisor may
not recollect the details of this project. It is important that we do not assume
that the audience remembers the background and all it takes is one or two
sentences to paint the picture.
Do not take for granted that the audience, even your supervisor, will
remember the context and other relevant details of the project. Often the
problem arises from the familiarity with people we see regularly such as
colleagues and supervisor. For effective communication it is good idea to
give a brief that will remind them of your work. Below are a few examples to
help you understand these issues.
9.8.1.1 Example
Consider an situation where a PhD candidate walks in the office of the
supervisor, and begins to tell the supervisor, “I have solved it. There is big
change in alpha and this proves it.” And, the supervisor looks at him and
wonders if this alpha was the name of the ice-cream that he was planning to
purchase for tonight after dinner. The supervisor did not understand anything
of what the student said because though the supervisor knows the project
in detail, he has many other responsibilities as well. While the student was
hoping that these results will be celebrated by the supervisor and there will be
excitement and celebrations during the meeting, the supervisor shows signs
of confusion and annoyance. The reaction was definitely not what the student
had hoped for.
9.8.1.2 Example
Consider another example – A Professor walks to the lab where many
students are busy working on the computer, and he says aloud, “Have you
finished that job”. And each of the students look at the next one, trying
to figure out what is it that the Professor wants. The Professor wanted to
ask student A if the task X related to the analysis of data D has been
analyzed using both techniques, T1 and T2. However, the students did not
understand anything. While they may not have expressed their frustration at
being disturbed, they were not impressed.
Effective communication with the audience requires ensuring that the
audience understand the purpose of the meeting or seminar or email. Do not
surprise the audience and ensure they remember the context. It is important
that you announce the purpose to the audience so that their expectations are
in-line with what you will be discussing.
126 Communication Skills
9.8.2 Content
It is essential for you to realise that most people in the room are very often
distracted from what you are telling them. They may not be interested in what
you are saying, or they may get distracted by their smart-phones or just that
their thoughts wander away to the aroma of the coffee from next room. Thus,
it is important that your presentation does not require absolute attention of the
audience but there are significant redundancies so that they can understand the
main idea even if they have missed a significant amount of the content.
Some people listen while others respond to the written material. However,
very few will respond to a long list of equations. And if you go to the other
extreme and populate your presentation with jokes or cartoons, many would
not be happy with that either. It is important that the content are neither trivial
nor too detailed but enough to get them to understand the message you are
delivering.
The actual format of putting the content together will depend on the
topic, the audience and your personal style. But one major purpose of the
content of your presentation is to get the trust of the audience so that they
are comfortable in listening to you. One factor that most people will notice is
whether you have paid attention to the detail, and whether you have made
an effort for the presentation. No one likes to attend meetings where the
presenter has been casual.
It is important to realise what are your strengths and weakness in the
context of your presentation. For example, if you are not good in oration, or
the language of the meeting is not your first language, depend more on the
written text such as powerpoint or document.
9.8.3 Conclusion
The purpose of the content of the presentation or document is to lead the
audience to the conclusion statement of the author. It is this conclusion that
carries your message to the audience and hence having a clear and precise
conclusion is necessary. The rest of the content of the presentation is to justify
your conclusion.
Do not expect the audience to link different parts of your presentation
by themselves; they have spent a few minutes while you have been working
on this for years. You have to help them and do this on their behalf and
should be done throughout the presentation or the meeting. One mistake many
people make is that they assume others can understand the logic underpinning
their interpretation of the results or findings. While the researcher has spent
9.9 Style of Communication 127
days and months working on their project, the listeners, even the supervisors,
may have only seen the results during the meeting and will be unable to
understand the conclusions. Hence it is essential to spell out clearly how you
have reached the conclusion from your results.
In many cases, it does not hurt if you engage with the audience to help you
make a conclusion. If someone offers you an idea for the interpretation of the
results which may be different from your own, please do not get worked up.
Just say a thank you and see if they may have a point or you may have made
an error. As a young researcher, you may have conducted the experiments but
all help should be welcome as it will improve your output. If you allow the
audience to help you with the interpretations, you will be the beneficiary and
may also win many friends. Remember that you do not have to accept all the
conclusions of the other people, but it does not hurt to listen. If you disagree
and the person is relevant to you, respond later with an email or similar but
avoid any argument at that time.
Another essential factor in oral communication, be it a meeting or a
seminar, is to know when to stop. Just because you have the chance to speak
should not mean that you take off with no intention of stopping. Remember
that the others have limited patience and capacity to listen to you and about
your work, however important.
audience and in context. When the bigger aim is clear, you do not have to
have the victory or defeat attitude when communicating with other people.
Assertive communicators are good leaders and provide the basis for success
to research projects.
ahead of sending it. When you send the email, it is essential to remember
that the moment the sent button is clicked; the entire world can be viewing
the message. Spend that extra minute in ensuring there are no glaring errors,
any room for incorrect interpretations, and nothing that has been said which
may hurt later.
9.11.1 Structure
To have an impact on the audience (readers) of your document, the text has to
be appropriately structured. The structure allows you express yourself clearly
and this is essential for all documents. Irrespective of the level of experience
you may have, it is essential to make a structure and plan for the document.
An unplanned document lacks the flow, may give confused messages and
requires many more revisions compared with a document that was started
with a structure. It is essential that it maintains the theme throughout where
each paragraph carries a single idea and the paragraphs are sequentially
connected. The document should flow comfortably without surprises and
have a single thread throughout.
The structure of the document should be such that it is focused and should
clearly identify the message for the audience. The reader should not have
to guess the message because they will invariably guess something different
than what you intend them to guess. The reader of the business document
or communique is not reading the document in leisure but is in a hurry and
wants to get the message quickly. Come to the point as simply and easily as
9.11 Formal Written Communication 135
it is possible. You are not writing a book for entertainment, nor are you are
politician.
Heading and subheading generally makes it easier for the reader to navi-
gate the document. It allows the reader to look for specifics in the document
that are of interest to them. However, overdoing this can be distracting and a
healthy balance should be maintained. One of the best ways to get the balance
is to take a printout of the document, walk away from it and then view it again.
If it looks like it looks cluttered with too many subheadings, then it is a good
idea to reduce them.
9.11.2 Style
The style of the document should reflect you and your organisation; all writers
have their own style and that is to be celebrated. However, there are some
simple rules that are helpful and these are irrespective of the style of the
author. It is important to ensure that the document is compact and precise,
there is the appropriate level of formality and it appears to be simple and not
convoluted. These are discussed below:
9.11.2.1 Compact
The style of the written message can be highly varied depending on the
modality, the purpose and the audience. Irrespective of the differences, it is
essential that the message demonstrates to the reader that some effort has
been made by the writer; reader likes to feel cared for. It should also be neat
and precise, where each paragraph and every word is important. It should not
appear that the writer has added words to fill space.
9.11.2.2 Formal
One key factor when writing a formal document is to remember that it is
going to be read by someone and not be spoken by the writer. There is a
distinct difference between spoken and written language. A written document
should have the necessary level of formality which is often not required in a
speech. It is also important to be aware that while a speaker may emphasize
and use pause, voice variations and gestures, these are not available to the
writer. Often authors write what is in the head which is more suitable for the
speech but not for a document. It is imperative that the document should be
planned and written formally.
One essential aspect of the formal document is to balance between too
much or not enough information. This should be based on the expectations of
136 Communication Skills
the readers. If there are multiple readers with different levels of expectations,
consider the structure such as use of appendix that will allow the reader the
details if required.
9.11.3 Content
It is essential to remember that the purpose of the document is not to
entertain the reader but to inform of the message. Most readers would like
to understand and judge the message easily, preferably in a single reading.
Thus, it is important that the content is written using the vocabulary that is
suitable for the audience.
It is important that the reader trusts the author and does not get an
impression that the statements are not accurate or irrelevant. The author
should always revisit the document and ensure that statements that appear
to be superfluous and irrelevant are removed. Many readers are comfortable
with a document that is crisp and precise.
9.12 Some Points for Effective Written Communication 137
3. Does the document have a flow? Does the reader know the purpose of the
paragraph in the sequence? A document where each paragraph appears
to stand-alone and the message from one paragraph does not flow to the
next makes the review process tiresome and annoying.
4. Is the entire document talking of one objective? The Harry Potter book
may describe many people and scenes but Harry Potter is the common
thread that runs through the entire book. It is important that we declare
the purpose of the document to the reader at the start and keep that focus
throughout the document.
5. It is essential that the document is simple and clear, such that it is suitable
for a person who may not even be keen to read it. Do not expect the
reader to be interested in your work and when writing, ensure that the
essential points are worded directly and easy to identify.
6. The purpose of the document is not to describe irrelevant details but to
make the reader appreciate the main issue or outcome. If the reader gets
interested in the main issue, they may come back for the details, but if
they got confused about the main issue, they will be negative to the entire
document and discount the message.
7. It is essential that the document has been edited several times, and
preferably by multiple people. When we view the document on the same
platform such as the computer screen, we may miss out the most obvious
errors simply because we have been seeing it for too long. It is a good
practice to take a print-out and read it the next day, and get a colleague
to give you an opinion.
Tasks
1. Do you make a plan when you are meeting your supervisor? Does the
supervisor have a plan?
2. Do you make a plan for your presentation?
3. Do you try to understand who your audience are and what is the purpose
of the meeting?
4. How long do you take to respond to an email?
5. Do you revise the text of your email before sending it?
6. Do you read the complete email before responding?
7. Do you have a plan for your document?
8. How many times do you revise the document before sending it?
9. How long are your sentences?
10
Why Publish?
Abstract
Many researchers and their supervisors may wish to do some exciting
research and find the writing and submission of manuscripts to be distracting.
On the other hand, there are others who seem to be doing research simply to
publish their work. This chapter investigates the need for publishing and how
to determine a suitable balance.
10.1 Introduction
Researchers love to be conducting exciting experiments, discovering and
inventing things, or solving difficult equations. The ocean scientists love
studying the oceans while the zoologists may enjoy studying the animals in
their natural habitat. The biochemists would love to be in their wet-labs while
the computer scientists may enjoy playing with algorithms and numbers on
their computers.
Publishing our work can often become a distraction from doing exciting
research. Many early stage researchers would rather be sitting in the labora-
tory and conducting interesting experiments or performing the analysis. But
then their supervisors may push them to publish, and often there is resistance.
Writing formal manuscripts is not what many researchers may consider
the enjoyable task. It requires formalising the experimental outcomes, and
submitting manuscripts with potential for being rejected. So, the question is;
why is it necessary? Or, is it necessary?
There can be number of different reasons why some researchers may
hesitate to write papers and it is important for the supervisor to understand
this. Lack of confidence, fear of rejection, inexperience in writing a paper,
laziness or unsure of what to report are some of the drivers.
It is important to realize that the purpose of publishing is different for
different people based on their stage in life and individual personality. To
139
140 Why Publish?
outcomes, but we will all agree that these provide the time-frame for the
student to work towards.
The research project of PhD students is different than the classrooms
with regular outcomes. Consider a three-year research project where the final
outcome is at the end of three years. The project may be funded by industry,
the government or by the University or self-funded by the researcher. The
difficulty is: how to monitor the progress of the project? In some research
projects, it is possible to identify demonstrable outcomes and link these to
a time-frame. However, this may not always be possible, and peer reviewed
publications can play an important role in this situation. Thus, the submission
for publication itself can be a milestone. It helps develop the time-frame
and gets peer-review and feedback which can be very important during the
project. However, it is important that while the submission can be a milestone,
it should not be considered the purpose of research. And while publication is a
highly desired outcome of the submission, the feedback should be considered
very useful and the basis for the future work.
There is one major advantage of a manuscript submitted for publications
which many PhD students and supervisors seem to overlook this. One big
advantage of publications: a good paper is often a full thesis chapter. This has
significant benefits because the manuscript is generally developed in close
cooperation with the supervisors and often other colleagues, and is reviewed
by external experts and this ensures its quality. While a supervisor in general
may not be willing to edit the thesis of the candidate, they will readily
participate in the preparation of the manuscript. Thus, if the researcher is
paying attention, it will help them to improve their communication skills
while getting a chapter ready in partnership with their more experienced
colleagues and supervisors.
was awarded to very few and by very few Universities. Things have since
changed rapidly and an estimate is that in 2014, global PhDs number was
greater than 500,000 compared with around 60,000 in 1990. Thus, while in
1910, about 1 in 10−6 people in the world had a PhD, in 2014, the expected
number is 1 in 0.5*10−3 . What this means is that having a PhD does not
automatically make you stand out of the crowd, and after our PhD, we need
to be judged and scrutinized by other people.
Judging another researcher is not an easy task. This is especially when the
first step in the judgment is performed by people who are often themselves
not researchers and in most cases not in the field of expertise of the applicant.
I have come across many researchers who would like to be viewed as individ-
uals and not just a number. We all would like to be considered to be experts in
the fields and others should accept our statement to this effect. However, the
same people who would like to be judged based on their statements, when
they judge others, would look at their internet profile based on measurable
factors such as citations, publications and such. While in principle what they
want for themselves is true and research is much more than a few measures,
the fact is that it is impossible for us to judge the work of another person
without a metrics. This is especially when the person is not working in the
field of expertise of the applicants. Rather than fight the fact that we are going
to be judged based on numbers, it is important to be aware of this and work
it to our advantage.
As applicants for jobs or grants, we have to stand-out from the crowd
and stand tall. Publications are essential to build your CV and get noticed.
Employers are comfortable to consider candidates whose work has passed the
test of peer-review as it indicates that the work is of quality and also confirms
the communication skills.
at the national levels. Universities and nations are keen to demonstrate their
intellectual might. With commercialization of education and research, not
only are laboratories and centers competing to demonstrate their strengths,
even nations are competing to show their ability to conduct research and
develop technology for jobs, society and security. In this busy marketplace,
how to stand out in the crowd?
There is yet another important factor that is relevant to show-case our
work and get noticed; to find partners. Real world problems are not solved
by people working in their silos but by teams, often which are highly
multi-disciplinary. For the team to work together, it is essential for the team
members to realize the strengths of the other team members, and this needs
to be show-cased.
from the government, the willingness of the commercial organizations and the
desire of the researchers. While there are pockets of success in some countries
such as Germany and Taiwan, these are still in the infancy. Researchers and
industry are notorious to have a very different world-view and often things
may start well but become sour soon after.
One significant difference between a researcher from a University and
the industry partner is the focus of the research. Researchers are seeking
new challenges while the industry is seeking the path of least resistance that
leads to commercially viable product or service. Commercial success does
not necessarily require the best or even the most useful technology but which
can attract the interest of the customers.
Another important consideration is the issue of intellectual property (IP).
Patents cost money, and also prevent the researcher from publishing the work
prior to the submission. However, only very small number of patents make
money while many devices and systems that are commercial success do not
have any IP protection.
Tasks
1. Have you published? If yes, why?
2. How do you evaluate other researchers?
3. Do you think that publication is a waste of time? What other options
would you prefer?
4. Do you think you need a publication track record to get a job?
5. Have you identified the audience of your potential publication?
11
How to Publish: Writing Manuscripts
Abstract
One of the most accepted measure of research progress is based on publica-
tions. These are essential for the recognition of the researchers and for them
to receive accolades. These are also required to report to granting bodies and
other stakeholders.
Good research does not automatically get published; it requires significant
effort to write the manuscript that communicates the outcomes to the target
audience. The impact of the research is only realised when the novel work is
appropriately communicated to the correct audience. This chapter discusses
some methods that can help early stage researchers to improve their chances
of getting published.
11.1 Introduction
High impact publication does not happen by accident but requires planning
from the start of the project. One of the most important factors is to identify
the audience of the work; who are the target audience? This is critical to
the research planning because each audience have many specific require-
ments and incorrect planning will lead to unacceptable outcomes for the
audience.
The other important factor is the presentation of the work. While language
skills are relevant for quality presentation, these are by no way the most
important factor. It is necessary to convey a direct message to the reader rep-
resenting the target audience and such a person should be able to understand
the work clearly. It is also essential that the appropriate reader engages with
the work and finds it useful.
A good paper is not a well written essay, nor is it a thesis but a formal
report written by an expert of the outcomes that are currently useful and
149
150 How to Publish: Writing Manuscripts
may need the thrust of the work in the algorithm development but only
require few examples. However, if this is applied for medical image diag-
nostic applications, the audience may not appreciate the algorithm but will
require significant details of patient recruitment and require large number of
examples.
It is also important to observe the differences in the style of reporting
the data and data analysis between different research disciplines. Further,
there are also some preferences in specific journals. The list is large and it
is important for the authors to be mindful of these differences and plan for
the target audience and the journal. Again, if this is considered during the
planning phase of the project, the results are significantly better.
sub-headings. The section below list these subheadings and the next section
describes the steps to write these.
• The Title
• Abstract
• Introduction
• Theory
• Methodology
• Data analysis
• Results
• Discussions
• Conclusion
• Reference
11.8 Abstract
Some journals allow the author to use their own style while there are others
that will specify the style of the abstract, typically having four subheadings;
Background, Methodology, Results, and Conclusion. Even if the journal does
11.9 Writing the Introduction 155
not insist this style, it is very useful to follow this format. A typical abstract
will have one sentence or about two lines for each subheading.
Never underrate the importance of the abstract, because many people will
read the abstract and if it is exciting, they will read the rest of the paper. Often,
unfortunately the reviewers have often made up their minds by the time they
read the abstract. While this is generally to be written after the paper has been
finalized, it is not to be done in a hurry.
There are some common mistakes when writing the abstract and these are
listed below:
• The abstract is not a summary of the introduction but the summary of
the paper.
• The purpose of the abstract is to help the readers decide if they
would like to peruse the complete paper. It should not sound like an
advertisement blurb but a precise.
• In our age of Dr Google and short time-frames, the abstract is more
important than ever before and will get the attention of the reader. It is
not an afterthought but should be very carefully written.
The Abstract is a very important section of the paper and will significantly
influence the reviewer, and future citations. Definitely no motherhood state-
ments and flowery language that appear to be wasting the time of the reader.
Write the abstract very lean, and it is here that the reader begins to form an
opinion of trusting the author and the paper. It needs to be simple, focused,
precise and clear.
11.10 Theory
Only a few journals have this as a separate section. However this information
is generally required in most papers and may need to go in the introduction
or methodology sections. It is an essential part of your manuscript and it is
important to consider the purpose of this section.
One common mistake done is to when you give too much or too little
information to the reader. The purpose of this section cannot be to teach
the fundamentals of the science to a new comer; a book may be required
for that purpose. However, many authors attempt to introduce the theory of
a complex topic in this section. In general, that would be waste of time of
the person who is familiar with the concept and will not be enough for a
beginner.
158 How to Publish: Writing Manuscripts
The aim of this section is to put your proposal on a definitive platform and
provide it the rigor. It can serve the purpose of providing the basis for people
in the field with a brief specifically required for your paper.
11.11 Methodology
The purpose of the methodology section is to provide sufficient details so that
anyone in the field can reproduce the experiments. It is essential that details
that are provided are in context of the manuscript and you do not describe
irrelevant aspects of the experiment. It is also important that no useful aspect
of the experiment is ignored.
To write this section, it is essential to re-read the results section critically
and identify the sections of the experiments that are relevant to the results.
Often new authors such as PhD students attempt to describe the details more
in terms of their significant effort in conducting the experiment which is not
the purpose here. The reader is not the supervisor and the information should
be coming from an expert to help another person to understand how they
can replicate the experiments. It is important not to miss any details and not
to take things for granted. The reader is not familiar with your laboratory
or even the city, and all relevant conditions need that could influence the
experimental outcomes are important. It is also essential that you refer to
appropriate sources to justify some aspects of the methodology. However,
just because others have done it does not give you the license to do the same
thing if it cannot be justified by you. When you report it in your manuscript,
it is your responsibility.
An example: You may have conducted experiments with aluminum, and you
believe that the results would be the same for all metals. Thus when writing
the paper, you describe the material as ‘metal’. However, you have not tested
this for any other metal. In such a situation, mentioning the material to be
metal is not accurate and can lead to difficulties in the future. This point
however may be relevant in the discussion section where you may suggest
that the experimental results could be extrapolated to other metals.
It is important to give all relevant details, including the make and model
of the equipment used, the settings, and the conditions. The reviewer needs to
be satisfied that your experiment is reproducible and that the results were not
by chance. Ensure that you use the style the reviewer is likely to be familiar
with. Familiarise yourself with the style of the methodology section of other
papers in the journal and follow their level of details and use the same style.
11.13 Discussion 159
11.13 Discussion
Discussion section is a very important part of the paper. By this stage, the
reader has identified with the paper and is keen to understand the work in
context of the work by other people. In this section, it is important to highlight
the observations from the results and compare these observations with that of
other people. This is also the place to highlight the novelty of the work and
the difference with the work reported by other researchers. Please be direct
and in simple language state what is the novelty. Do not expect the reader to
guess or understand it by themselves.
In the discussion section, you need to tease out the relevance of your
work in relations to others and show the new insights. You have to argue the
differences and similarities of your results from that of others. It is essential
that this section is very well connected with the extensive literature review,
and with the results section. Do not expect the reader to find the correlation
between the observations discussed here with the tables and diagrams from
the results section, but spell these out for the audience. Lead the audience to
understand the relationship between your conclusion (how you started writing
the manuscript) and the results. While this relationship may be evident to you,
do not expect it to be evident to the audience.
160 How to Publish: Writing Manuscripts
This is the section where the actual results are discussed and there is no
place for motherhood statements. It is also important to ensure that you bring
out the relationship between your work and that of others. This is also the
place to scope the work and identify what remains to be discovered. Write the
scope of study and outline the limitations of the research. List the limitations
and discuss the methods to overcome these. Most readers will not consider
such a list to be a weakness but strength of the paper as it helps put it in
perspective. This will also help the reviewer determine its suitability to the
journal.
It is essential for the author to realize that there are many other people
who would be doing something similar. Thus, while being confident, it is
also essential to be humble. In this section, you should discuss some of the
applications that you mentioned in the start of the introduction section. It is
important to be direct and state whether you believe you have solved any
problem and explain the reason. Do not expect the reader to understand this
even though it may be evident to you.
11.14 Conclusion
Conclusion should be strong, to the point and clear. Your conclusion is not
that ‘we have achieved this . . .’, but that “we have concluded that . . .”.
Typically, this should mirror the problem statement in the introduction
section. While in the introduction section, the hypothesis was stated, the
conclusion is the confirmation or negation of that hypothesis. A simple
statement that clearly states the novelty of the work is very useful as it helps
the reader understand your claim.
Many journals expect the key limitation/s to be stated in this section. It is
also the section where you can list the future work that arises from the out-
comes and limitations you have listed. You can also list some of the possible
applications of this conclusion. However, it is important that the reader does
not see these as being too far-fetched. Try to think big but do not be perceived
to be a liar.
the outcomes without being afraid if the referee is in the opposite camp. Try
to be upfront without being brash, and there is greater likelihood of getting
an acceptance than if you try and not make a statement.
A paper that states the problem clearly with evidence and the problem is
current has a greater likelihood of getting accepted. Papers that demonstrate
incremental improvement in the current science in the field of that journal
would also have a better chance. Such papers may show a new approach to
the problem and is more likely to get the attention of the peers. Identify what
your novelty is and if possible, state it in so many words. Do not expect
the reader to pick up these points, which, while being obvious to you is not
evident to the reader. Remember that while you have spent years doing the
work and months writing the manuscript, the reviewer is going to spend a few
minutes to first decide if they like or dislike the manuscript.
A highly focused paper that identifies one very specific issue is likely to
make a mark on its audience and has a higher chance compared with a paper
that appears to be doing too many things. If you are keen to publish multiple
outcomes in one paper, it may help to identify the direct outcome and the
secondary or indirect ones. Or, it may be wiser to split it and write 2 papers.
Another factor that is necessary for a paper to get accepted is clear
evidence that the results are real, methodology is repeatable, and there is
evidence of the data. Most reviewers would not be familiar with the details of
the work of the authors and it is difficult for them to evaluate if the results are
genuine. It is essential for the journal to trust the authenticity of the work. As
an author, it is important to describe all the relevant details, provide photos
and when possible, to offer to share the data.
References can often be the cause of papers getting rejected. Most jour-
nals are keen to see that the list is current and most papers are not very old.
It also helps to see if work from the target audience have been considered.
Often the barometer of this could be that there are relevant references which
are cited from the target journal. The audience of the journal would identify
with the work. The best way to demonstrate this is if there are similar works
that have been published in the recent issues of the journal.
All reviewers like to see well written papers that show attention to detail.
Some minor things that can be easily managed in our digital world are
sometimes forgotten during submission are; spell check, font size, and labels
of the figures. Ensuring that the figures are labeled well, and the numbering
is correct does not require extensive time and demonstrate that the paper is
easy to read and has the professional feel.
11.19 Post-Submission of Manuscript 163
the reviewers seem to have done a terrible job. While not very common,
unfortunately this does happen sometimes. It is essential not to take rejections
personally, be resilient and move on.
In most cases, there is little benefit to go and complain about the review
to the editor. Most editors will not act on such complaints. The best outcome
after the paper is rejected is to read the review comments and identify
improvements and corrections. It is important to realize that in all probability
the reviewer does not care who the author is and their comments are largely
based on the views of a person who did not fully understand the importance of
the work. This may indicate the incorrect audience or communication skills.
However, if you are convinced that the reviewer has been biased, then it is
important that you write a letter where you clearly articulate the facts. Before
you do that, it is a good idea to run it past a colleague who can give you a
second opinion regarding the reviewer comments.
managing the work. Having a single question can be discomforting over the
duration of three years, and having many small questions can lead to loss of
focus.
Heading Description
Presentation Is the manuscript well written or does it have errors in
presentation? Has the manuscript been written in the
language suitable for the audience? Are the figures
neat and easy to understand? Has the author
demonstrated the knowledge of current literature?
Innovation Is the manuscript reporting something novel and
interesting to the audience?
Methodology Can the average audience of the journal replicate the
experiment based on the information that has been
provided?
Results Are the results well documented and have these been
described in a manner consistent with the journal and
its audience? Has the statistics been done
appropriately?
Discussion Have the results been interpreted in terms of the
Suitability to the Is this manuscript reporting work that will be of
Audience interest to the audience?
Impact Will this work have an impact on the audience?
While the above rubrics is useful and most commonly used, below is a rubrics
that could make it easier for the author to understand the expectations of many
journals:
166 How to Publish: Writing Manuscripts
the results without being very negative. I believe that a good author has the
art of not being negative but not necessarily having to agree with different
opinions.
If you disagree with the comments of the reviewer, state it clearly and
politely but based on the strength of the literature review and facts. Do not be
aggressive but assertive.
Tasks
1. Get your hands on the manuscript in your field that was rejected. Now
use the rubric and review the paper. What score did you give?
2. Review a paper that has been published and using the rubric, score it.
3. If you have written a manuscript, review it again using the rubric and see
how does it score.
Appendix
169
170 Appendix
C R
Communication skills 16, 117, Research evaluation 18, 62, 156
144, 164 Research Methodology 96
Research proposal 47, 85, 88, 93
P Research track record 169
PhD candidature 10, 25, 40, 44
PhD supervision 34, 51, 74 W
Publishing 118, 139, 147, 150 Writing papers 140, 147
171
About the Author
Dinesh Kant Kumar did his B.Tech. from Indian Institute of Technology,
Madras (Chennai) in Electrical and then his PhD in Biomedical Engineering
from Indian Institute of Technology, Delhi. After a brief stint in the industry,
he became an academic in 1997.
Dinesh Kant Kumar is a Professor in Biomedical Engineering at RMIT
University, Melbourne, Australia. He has graduated to completion 24 PhD
and 6 Masters by research students, and has published over 400 papers. He
has also got three patents and been successful in the translation of technology
by starting start-ups. He loves meditation, reading, trekking in remote parts
of the world and horse-riding. But his passion is to experiment with life itself,
and to explore the definitions of Time, Space and I.
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