DOC-20250213-WA0002
DOC-20250213-WA0002
CHO-CH(OH)-CH(OH)-CH(OH)-CH(OH)-CH₂OH.
*B)Ring Structure of Glucose:Along with open chain structure, glucose exists in the form of
ring structure or cyclic structure. i) The open chain structure is represented perpendicular
to plane of paper. The H and OH on the carbon number 2, 3, 4 and 5 are shown above and
below the plane.ii) In this open chain structure of D(+) Glucose, rotation of C-C, bond takes
place in anticlockwise manner. It brings the C3-OH close to CHO group.iii) There is
nucleophilic attack of Cs -OH on C O group of CHO to produce ring structure of glucose.iv)
As attack of Cs -OH on C=O is possible from both sides (due to planar structure of CHO)
we get two ring structures of glucose, a-D Glucose and B-D Glucose. These two ring
structures of glucose have different position of H and OH on C, of their molecule. Hence
they are called as anomers.
*Types of Polysaccharides:polysaccharides are divided into two types on the basis of their
biological functions•Storage Polysaccharides:They play important role as stored form of
energy in living organisms. They act as reserve food that undergoes hydrolysis and produce
energy. For example, starch, inulin and glycogen are most common storage
polysaccharides.•Structural Polysaccharides:They play important role as structural
elements in living organisms. They give structural strength to the living organisms and are
involved in formation of cell wall in plants. For example, cellulose and chitin are the most
common structural polysaccharides.
*Structure of Starch:Starch consists of two components 1) amylose 2) amylopectin.
1)Amylose is a straight chain polysaccharide. It consists of large number of D-Gluc units.
These D-Glucose units are joined to each other by a 1, 4 linkages. Its molecular weight vary
from few thousands to 150,000. Amylose chain contains more than 100 D-Glucose units in
a straight chain.
Unit 2*Amino acids:Amino acids are simple organic compounds containing carbon,
hydrogen, oxygen, nitrogen and sulphur. They essentially contain a basic amino group and
an acidic carboxylic group.
*Structure of Amino Acids:Amino acids contain a carboxylic group (-COOH) and an amino
group (-NH2). The amino group is attached to the carbon atom next to the carboxyl group.
This carbon atom number 2 in the chain is also called as α carbon. Therefore, amino acids
are also called a amino acids.The general structure of amino acids can be represented as
follows.
*Amino acids exist in two structural forms. 1) Molecular form 2) Zwitterion form:
1)Molecular form of an amino acids is nonionic form in which amino acid contains a
carboxyl group (-COOH) and an amino group (-NH2).
2)zwitterion form of amino acid is obtaine by donation of H from proton donor -COOH
group to proton acceptor -NH, group. As result we get an ionic form containing -COO and
NH3 groups. This dipolar form of amino acid is called zwitterion form.
*B) Classification of proteins based on Shape:On this basis, proteins are classified into two
types,1) Globular Proteins:They have globular or spherical shape. In globular proteins
polypeptide chains are folded and coiled tightly into compact spherical shape known as
globular shape.For example, nearly all enzymes are globular proteins.2) Fibrous
Proteins.They have structural shape like a thread or a fiber. In fibrous proteins, polypeptide
chain is extended along one axis to yield long fibers or sheet like structureexample, a
keratins, fibroin,collagen, etc. are fibrous proteins.
*A) α-Keratins:α-Keratins are major fibrous proteins present in vertebrates. These are long
fiber like proteins.α -Keratins are insoluble in water. α -Keratins are present in hair, nails,
horns, feathers, etc. They provide external protection to the organisms.α-Keratins
characteristically contain cysteine amino acids from 10 to 22%.α-Keratins have great
structural stability. Hence they protect and provide structural strength to the part they
surround.
*B)Hemoglobin (Hb):Hemoglobin is a globular protein. It is a transport protein present in
red blood cells of all Vertebrates. It is spherical in shape and is soluble in
water.Hemoglobin contains four polypeptide chains known as globin chains.Hemoglobin is
a transport protein. It transports oxygen from lungs to all parts of body by reacting
reversibly with O2.
*Separation of amino acids and proteins:Several biochemical techniques are used for
separation of biomolecules from each other. These techniques are also used for
purification of the biomolecules.Common techniques used for separation of amino acids
and proteins are 1) Paper electrophoresis 2) Dialysis
2) Dialysis:This technique is used for separation of biomolecules on the basis of their size.
For example, by using dialysis technique, globular proteins having larger size can be
separated from other biomolecules of smaller size. In this technique a semipermeable
membrane is used.
Unit 3*ENZYMES:Enzymes are the proteins that catalyse the biochemical reactions taking
place at cell level in living organisms. Therefore, enzymes are the biological catalysts that
accelerate the biochemical reactions.Role of the enzyme is to increase rate of biochemical
reactions. Structurally, enzymes are globular proteins.
*Classification of Enzymes:Enzymes are classified into six classes on the basis of the
reaction they catalyse.
5) Ligases:These enzymes are also called Synthetase. These enzymes catalyse joining of
two molecules together by condensation reaction.
Substrate is first converted to the transition state which is then converted to the product. A
fixed amount of energy is required to convert any substrate to transition state. It is called
Energy of Activation (Ea). In absence of an enzyme, energy of activation is very high.Enzyme
lowers down the energy of activation due to which rate of the biochemical reaction
increases.
*Enzyme inhibitors:Many compounds have ability to combine with certain enzymes and
thereby block the active site of that enzyme. Because of this, catalytic property of enzyme
is inhibited or even stopped. Such compounds decrease the activity of enzymes and they
are called enzyme inhibitors.
*Types of enzyme inhibitors:it is classified into two types .1) Irreversible inhibitors 2)
Reversible inhibitors.
*LIPIDS:Lipids are the biomolecules that are generally insoluble in water containing fatty
acids as a major component. They are esters of fatty acids and alcohol.
*Functions of lipids:Lipids have several biological functions.1)They act as structural
component of cell membranes.2)They are important source of energy for organisms. They
are stored in adipose tissue in the form of triglycerides.3)They act as insulating material
and make protective coating on surface of organs and tissues.They act as essential
nutrients for organisms.
a) Simple Lipids:Simple lipids are esters of fatty acids and glycerol. They do not contain any
other components or groups. For example, triacyl glycerols are most common simple lipids
that are commonly known as oils and fats.
b) Complex lipids:In addition to esters of fatty acids and alcohol, complex lipids contain
some other groups or components like phosphate group, nitrogenous group, etc. For
example, phospholipids, sphingolipids and waxes are common types of complex lipids.
*Fatty acids:Patty acids are long chain carboxylic acids containing 4 to 30 carbon atoms in
a straight chain along with a carboxyl (-COOH) group. The fatty acids may be saturated or
unsaturated. Saturated fatty acids contain carbon chains with single bonds only.
*Nomenclature of fatty acids:Fatty acids differ from each other in chain length (number of
carbon atoms), number of double bonds and in position of those double bonds. Hence
fatty acids are symbolized by a short hand notation that designates the length of carbon
chain, number and position of double bonds.Its structure is as follows.CH3-(CH2)14-
COOH.
*Triacylglycerols:Triacyl glycerols are esters of glycerol and three fatty acids. They are
obtained by esterification of three molecules of fatty acids with three -OH groups of
glycerol. They are also called triglycerides.For example, olive oil, palm oil, soybean oil, rice
bran oil and cocoa butter are common vegetable sources of lipids.
*difference between oils and fats:When fatty acids present in triacylglycerol are
unsaturated, it is liquid at room temperature and it is called Oil. But, when fatty acids
present in triacylglycerol are saturated, it is solid at room temperature and it is called Fat.
*Waxes:Waxes are complex lipids. But, actually waxes are a complicated mixture
containing hydrocarbons, lipids and many more compounds. They are widely spread in
nature. The name wax originates from the material present in honeycomb known as bee
wax.Waxes are solid esters of long chain fatty acids with long chain monohydroxy fatty
alcohols.Waxes are chemically inert as they do not have double bond in fatty acids.Waxes
have important biological functions due to their hydrophobic nature.
Unit 4*Nucleic Acids:Nucleic acids are the essential biomolecules made up of simple
building block units known as nucleotides. Thus, nucleic acids are high molecular weight
biopolymers made up of nucleotide monomer.
*Types of nucleic acids:There are two types of nucleic acids present in all living
organisms.1. Deoxy ribo Nucleic Acids (DNA)2. Ribo Nucleic Acids (RNA) DNA is found
mainly in nucleus of living cells while RNA is mostly found outside the nucleus in the
cytoplasm
(1) Sugars:Name of the nucleic acid is derived from the sugar present in it. The sugars
present in nucleic acids are pentose sugars. These sugars have furanose ring structure.
There are two types of pentose sugars present in nucleic acids.a) a-D-Ribose. b) 2 Deoxy a-
D-Ribose. In DNA 2-Deoxy a-D-Ribose sugar is present while in RNA a-D-Ribose sugar is
present
.2) Bases:Nucleic acids contain heterocyclic nitrogenous bases. There are total five
nitrogenous bases present in nucleotides that make DNA and RNA. These bases are the
derivatives of purine or pyrimidine bases. Thus, purine and pyrimidine are the parent
organic compounds present in these five nitrogenous bases.
*Watson and Crick model of DNA:Watson and Crick in 1953 proposed a three dimensional
model of DNA structure. This model was based on X-ray studies on DNA and it was called
double stranded a helical structure.
*The salient features of Watson and Crick model of DNA are:1. Watson and Crick model of
DNA proposed that in a DNA molecule two polynucleotide chains or strands are present.2.
These two chains or strands are antiparallel to each other.3. The two polynucleotide chains
are joined to each other through the bases present in the nucleotides. The bases of two
chains are joined to each other by Hydrogen bonding. It is called as Base Pairing.4. The
base pairing between two chains is very specific.. 5)As a result of double helical structure,
DNA molecule has two asymmetric grooves.
*Ribo nucleic acid (RNA):RNA is another type of nucleic acid having polynucleotide chains.
It contains polymeric chains of ribose nucleotides. Its important function is in protein
synthesis in living cells. The main difference between DNA and RNA is that DNA is double
stranded while RNA is a single stranded biomolecule.
Types of RNA:There are three main types of RNA present in all living cells.
1)Messenger RNA(mRNA):It constitutes about 5% of total RNA. It is synthesized in nucleus
during transcription process. It has single stranded helical structure. Sequence of bases in
mRNA is complimentary to that of DNA undergoing transcription.
2. Transfer RNA (tRNA):It is also known as soluble RNA. It constitutes about 15% of total
RNA. It is present in Cytoplasm. It has comparatively low molecular weight. About 60 to 70
percent structure of tRNA is in double helix form. It has four arm cloverleaf structure.
3. Ribosomal RNA (rRNA):It constitutes about 80% of total RNA present in the cell. It
combines with proteins in cytoplasm to form ribosomes. The ribosomes present in
cytoplasm act as site of protein synthesis. It has high molecular weight. It has single
stranded structure.
*Types of energy rich compounds:Most common types of energy rich biomolecules are -
1)Pyrophosphates. 2) Acyl phosphates 3) Enolic phosphates 4) Thiol esters
*Acyl Phosphates:Acyl phosphates are the energy rich compounds in which acyl group is
attached to the phosphate group. 1, 3 diphosphoglyceric acid and acetyl phosphate are
examples of acyl phosphates.
*Enolic Phosphates;Enolic phosphates are the phosphate esters of enol forms of organic
compounds. Phospho enol pyruvic acid (PEP) is example of enolic phosphate. It is
phosphate ester of enol form of pyruvic acid. It is an important intermediate formed during
glycolysis process.
*Thiol esters:Thiol esters are the compounds obtained by esterification of carboxylic acid
by a thiol (-SH) Group. They are common intermediates during many biosynthetic
reactions. Acetyl coezyme A and Acyl CoA of fatty acids are the most common example of
thiol esters. They are produced during Different metabolic processes like ẞ oxidation of
fatty acids.
*Energy carriers in biological redox systems: NAD and FAD:There are many compounds
that transport electrons during biochemical processes from Electron donors to electron
acceptors via redox reactions. This transfer of electrons is coupled with Transfer of protons
also. There are two coenzymes NAD and FAD associated with many Biochemical reactions
and they act as electron carriers.
*Nicotinamide Adenine Dinucleotide (NAD):It exists in two forms. The oxidized form is
represented as NAD and the reduced form is represented as NADH. During a redox
reaction, NAD+ carries out oxidation of the substrate. As a result NAD+ is converted to its
reduced form NADH.NADH is now reoxidized to NAD by using molecular oxygen.
*Flavin Adenine Dinucleotide (FAD):It also exists in two forms. The oxidized form is
represented as FAD and the reduced form is represented as FADH2.FADH is now reoxidized
to FAD by using molecular oxygen. During this reoxidation process large amount of energy
is released which is conserved in the form of 2 ATP molecules. This process is called
oxidative phosphorylation..
2)Pay off phase includes next six steps in which there is conversion of the two
glyceraldehyde 3-phosphate molecules to two lactic acid molecules. In this stage energy is
released and stored I the form of ATP.
*Aerobic and Anaerobic Glycolysis:In aerobic organisms, the end product of glycolysis
process is pyruvic acid. Therefore, pyruvic acid is not converted to lactic acid. This is called
aerobic glycolysis.In anaerobic organisms, the end product of glycolysis is lactic acid.
And it is called anaerobic glycolysis or lactic acid fermentation.
*TCA cycle (Tricarboxylic acid cycle):Conversion of acetyl CoA into oxaloacetic acid via
citric acid by a cyclic sequence of biochemical reactions is called as Tricarboxylic Acid
cycle (TCA cycle). It is also called Kreb cycle or Citric acid cycle.
*Important features of TCA Cycle:1) Oxaloacetic acid that reacts with acetyl CoA in first
step of TCA cycle, is regenerated in the last step.2) Acetyl CoA is the only substrate in TCA
cycle. Two carbon atoms of acetyl group from acetyl CoA are oxidized to two molecules of
CO₂ in two successive steps of decarboxylation (Steps 3 and 4).3) During TCA cycle, there
is formation of one FADH2 and three NADH molecules which undergo reoxidation by using
two molecules of O2.
*Amino acid metabolism:These amino acids are converted to a keto acids which are
important source of energy. Ammonia is important for all the living organisms. It is required
for biosynthesis of many compounds like nucleotides and proteins.Amino acids undergo
three important types of reactions during metabolism.Amino acids undergo three
important types of reactions during metabolism. 1)Transamination 2)Deamination 3)
Decarboxylation