Bio.assignment
Bio.assignment
INFECTION
Exposure
The pathogen comes
into contact with the Stages of INVASION
host. This happens infection
through the skin,
mucous membranes
and other routes.
ADHESION
INFECTIOUS DISEASES AND THEIR
WAYS OF INFECTION
• To cause an infectious disease, a pathogen must successfully complete the following four stages of pathogenesis:
INFECTION
EXPOSURE
Stages of INVASION
infection
Adhesion
Is a crucial step for
pathogens to persist
in the host by using
adhesins, which are
proteins on their
surface, to attach to
the host.
INFECTIOUS DISEASES AND THEIR
WAYS OF INFECTION
• To cause an infectious disease, a pathogen must successfully complete the following four stages of pathogenesis:
INFECTION
INVASION
The pathogen enters
the host and travels
Stages to the site of
EXPOSURE of infection. Once a
infection pathogen has
infected a host, it
can spread to the
other host.
ADHESION
INFECTIOUS DISEASES AND THEIR
WAYS OF INFECTION
• To cause an infectious disease, a pathogen must successfully complete the following four stages of pathogenesis:
INFECTION
Is the final stage
where the pathogen
damages the host’s
tissue which causes
disease at last.
Stages
EXPOSURE of INVASION
infection
ADHESION
DIFFERENCE BETWEEN INFECTION
AND DISEASE
Infection is the initial stage where a pathogen enters and multiplies in the host.
Disease occurs when the infection progresses to a point where it disrupts normal bodily
EXAMPLES Pain, fatigue, dizziness, Fever, rash, high blood Down syndrome, metabolic
nausea. pressure, swelling. syndrome, acquired
immunodeficiency syndrome (AIDS).
Communicable Disease: Diseases that can be transmitted from one host to
another.
BASED ON mode of transmission and how easily the disease spreads between hosts.
Contagious Diseases: subtypes of communicable diseases that are easily spread
Distinction: While all contagious diseases are communicable, not all communicable diseases
are considered contagious (e.g.., HIV is communicable but not highly contagious).
BASED ON mode of transmission and how easily the disease spreads between hosts.
Non-communicble Disease: Diseases caused by pathogens but not transmitted from
others.
BASED ON mode of transmission and how easily the disease spreads between hosts.
Incidence: fraction of a population that contracts a disease during a specific time.
OR the number of people in a population who develop a disease over a period of
time. This is limited to new cases only.
Prevalence: fraction of a population having a specific disease at a specific point in
time. This includes both new and pre-existing cases.
1. Sporadic disease: an infectious disease that occurs irregularly, infrequently, and in
isolated places, without a clear pattern of when or where it occurs like TETANUS.
2. Endemic disease: A disease that is regularly found in a specific area or among a
particular group of people. For example, MALARIA is an endemic disease.
3. Epidemic disease: disease acquired by many hosts in a given area in a short time.
It is an outbreak of disease that spreads quickly and affects many individuals at
the same time like Cholera, Diarrheal diseases, Measles
4. Pandemic disease: A disease that is widespread across a country or the world.
COVID-19 is an example of a pandemic disease.
D. Primary Infection: The initial acute infection that causes illness. It is the first
time a patient is exposed to a virus or pathogen and doesn't have antibodies to fight it.
primary infection. It’s a bacterial or viral illness that occurs after or during treatment for
SECONDARY
INFECTION SUBCLINICAL INFECTION
Incubation Period
Prodromal Period
Period of Illness
Period of Decline
Period of Convalescence
The development of a disease typically follows several stages, each representing a different phase
PERTIOD OF DECLINE
The stage where signs and symptoms start to lessen as the body’s immune response,
medications, or treatment begin to control and eliminate the pathogen. The patient may
still feel weak or tired, but overall health begins to improve .
The development of a disease typically follows several stages, each representing a different phase
PERIOD OF CONVALESCENCE
SSTAGES OF DISEASE INFECTION
Pathogenicity
• Refers to the ability of a microorganism (such as a bacterium,
virus, or fungus) to cause disease in a host.
• The degree of pathogenicity is influenced by the presence of
specific traits or factors that enable the microorganism to cause
harm, known as virulence factors.
Microorganisms are classified based on their pathogenicity:
1. Primary Pathogens: These cause disease in healthy individuals, such as
those responsible for malaria, influenza, and tuberculosis. They are
inherently virulent due to specific virulence factors.
2. Opportunistic Pathogens: These cause disease only when the host's
immune defences are weakened or the pathogen is in an unusual location.
They are often part of the normal microbiota or found in the environment.
• The degree of pathogenicity is influenced by the presence of
specific traits or factors that enable the microorganism to cause
harm, known as virulence factors.
Microorganisms are classified based on their pathogenicity:
1. Primary Pathogens: These cause disease in healthy individuals, such as
those responsible for malaria, influenza, and tuberculosis. They are
inherently virulent due to specific virulence factors.
2. Opportunistic Pathogens: These cause disease only when the host's
immune defences are weakened or the pathogen is in an unusual location.
They are often part of the normal microbiota or found in the environment.
3. Normal Microbiota: Harmless microorganisms that live on the body, but
can become harmful if the immune system is compromised.
4. Immune-compromised Individuals: People with weakened immunity (due
to factors like disease, surgery, or drug use) are more vulnerable to infections
from opportunistic pathogens.
SPREAD OF INFECTION
The spread of infection refers to the process by which
infectious agents (like bacteria, viruses, fungi, or parasites)
are transmitted from one host (person, animal, or
environment) to another, leading to new cases of disease.
Spread of Infection:
1. Human Reservoirs: People who harbor disease-causing
microorganisms.
Sick People: Actively ill individuals.
Carriers: Individuals who carry pathogens without showing
symptoms.
Latent Carriers: Individuals who are contagious during incubation or
recovery.
2. Zoonoses: Diseases that can be transmitted from animals to humans
through:
Direct contact with animals or their waste.
Eating animals.
Blood-sucking insects.
3. Non-living Reservoirs:
Soil, water, and food can also
carry pathogens, often
through contamination by
faeces or urine.
Decreased barriers
FACTORS
wildlife can increase
ecosystem's ability to
the risk of zoonotic
regulate disease.
diseases.
AFFECTING
Lack of resources Climate
A lack of resources can make it
DISEASE
leishmaniasis by changing the
hygiene Inappropriate use of
size and distribution of sandfly
antibiotics Use of counterfeit
populations. Drought, famine,
drugs Understaffing and lack of
and flood can also cause people
training of health-care
to migrate to areas where the
professionals disease is transmitted.
Introduction of
new vectors
fever.
Lack of resources Decreased barriers
Climate change
and environmental
professionals diseases.
new vectors
spread of diseases like Environmental
ecosystem's ability to
fever.
populations. Drought, famine, regulate disease.
Environmental
into a region can lead to hygiene Inappropriate use of
fever.
between humans
Decreasing barriers
diseases.
ecosystem's ability to
Climate
disease is transmitted.
Introduction of
new vectors
wildlife
fever.
Decreasing barriers
Lack of resources
and environmental
professionals
Ecosystem degradation
environmental
Climate change can affect the
plant or insect vectors
spread of diseases like
professionals.
Decreasing barriers
Ecosystem degradation
between humans and
can reduce the
wildlife can increase
ecosystem's ability to
the risk of zoonotic
regulate disease.
diseases.
Climate
change
Climate change can affect the
Introduction of
and flood can also cause people
disease is transmitted.
Environmental
new vectors
degradation
Ecosystem degradation
The introduction of new plant or
can reduce the
ecosystem's ability to
insect vectors into a region can
lead to the rapid transmission of
regulate disease.
between humans
Rift Valley fever. Lack of resources
diseases. professionals
TE R I A
BAC
BACTERIA Definition of Bacteria
Bacteria are single-celled prokaryotic organisms
characterized by their lack of a nucleus and
membrane-bound organelles. These microscopic
organisms are found in diverse environments,
including extreme conditions. They play crucial roles
in ecosystems, human health, and industry but can
also cause various diseases.
Definition of Bacteria
Characteristics of Bacteria
Bacteria are single-celled prokaryotic organisms
characterized by their lack of a nucleus and membrane-
bound organelles. These microscopic organisms are found
1. Structural Features:
in diverse environments, including extreme conditions.
They play crucial roles in ecosystems, human health, and
industry but can also cause various diseases.
Cell wall: Composed of
peptidoglycan in most bacteria.
Plasma membrane: Regulates
material exchange.
DNA: Typically a single circular
chromosome.
Ribosomes: Smaller (70s) than
eukaryotic ribosomes (80s).
Appendages: Flagella (movement),
pili (attachment, conjugation).
2. Reproduction:
Binary fission is the primary
Binary fission is the primary
method of reproduction, producing
Definition of Bacteria
genetically identicaloffspring.
Bacteria are single-celled prokaryotic organisms
characterized by their lack of a nucleus and membrane-
Genetic variation occurs via
bound organelles. These microscopic organisms are found
in diverse environments, including extreme conditions.
They play crucial roles in ecosystems, human health, and horizontal gene transfer
industry but can also cause various diseases.
(conjugation, transformation,
transduction).
3. Metabolism and Adaptability:
Metabolic diversity includes photo-
trophy, chemo-trophy, autotrophy,
and heterotrophy.
Adaptations allow survival in
extreme environments like hot
springs (thermophiles) or acidic
waters (acidophiles).
Classification of Bacteria
1. By Gram Stain:
Gram-positive: Retain crystal violet stain
(e.g.., Staphylococcus, Streptococcus).
Gram-negative: Do not retain crystal violet;
have an outer lipid membrane (e.g. Escherichia
coli, Salmonella).
2. By Shape:
Cocci (round), Bacilli (rod-shaped), Spirilla
(spiral), Vibrions (comma-shaped).
3. By Oxygen Requirements:
Aerobic (require oxygen), Anaerobic (survive
without O2), Facultative anaerobes adaptable.
4. Other Criteria:
Environmental preferences, nutritional modes,
and pathogenicity.
Diseases Caused by Bacteria
I. Respiratory Diseases
1. Tuberculosis (TB):
Cause: Mycobacterium tuberculosis.
Symptoms: Chronic cough, fever, weight loss,
night sweats.
Treatment: Combination of antibiotics
(Rifampicin, Isoniazid, Ethambutol,
Pyrazinamide) for 6-9 months.
Traditional Medicine: Garlic and honey for
immune support. And also Ayurvedic remedies
like Tulsi and Ashwagandha.
2. Pneumonia:
Cause: Streptococcus pneumoniae or
Haemophilus influenzae.
Symptoms: Fever, cough, chest pain, difficulty
breathing.
Symptoms: Fever, cough, chest pain, difficulty
breathing.
Treatment: Antibiotics (Amoxicillin,
Azithromycin).
Traditional Medicine:
• Eucalyptus oil inhalation for decongestion.
• Herbal teas (ginger, turmeric).
II. Gastrointestinal Diseases
1. Cholera:
Cause: Vibrio cholerae.
Symptoms: Severe diarrhea, dehydration.
Treatment: Oral rehydration therapy,
tetracyclines, or azithromycin.
Traditional Medicine:Neem extracts and ginger
for diarrhea.
2. Typhoid Fever:
Cause: Salmonella typhi.
Symptoms: High fever, abdominal pain,
• Herbal teas (ginger, turmeric).
II. Gastrointestinal Diseases
1. Cholera:
Cause: Vibrio cholerae.
Symptoms: Severe diarrhea, dehydration.
Treatment: Oral rehydration therapy,
tetracyclines, or azithromycin.
Traditional Medicine:Neem extracts and ginger
for diarrhea.
2. Typhoid Fever:
Cause: Salmonella typhi.
Symptoms: High fever, abdominal pain,
constipation/diarrhea.
Treatment: Ciprofloxacin or Azithromycin
Traditional Medicine:Fenugreek seeds and basil
leaves.
III. Skin Infections
1. Impetigo:
Cause: Staphylococcus aureus or Streptococcus
pyogenes.
Symptoms: Red sores, blisters, itching.
Treatment: Topical antibiotics (Mupirocin).
Traditional Medicine:Tea tree oil for its
antibacterial properties.
2. Leprosy:
Cause: Mycobacterium leprae.
Symptoms: Skin lesions, nerve damage,
numbness.
Treatment: Multi-drug therapy (Dapsone,
Rifampicin).
Traditional Medicine:Herbal pastes made from
neem or turmeric.
IV. Sexually Transmitted Diseases
(STDs)
1. Gonorrhea:
Cause: Neisseria gonorrhoeae.
Symptoms: Painful urination during discharge
and pelvic pain.
Treatment: Ceftriaxone, Azithromycin.
Traditional Medicine:Cranberry juice for
urinary health.
2. Syphilis:
Cause: Treponema pallidum.
Symptoms: Sores, rashes, systemic organ damage
(late stage).
Treatment: Penicillin G injection.
Traditional Medicine:Decoctions of guava
leaves and other astringents.
Diagnosis and Treatment of Bacterial Diseases
DIAGNOSIS OPTIONS
1. Laboratory Tests:
Gram staining, Accurate microscopy.
Culturing bacteria on selective media.
Sensitivity testing for antibiotic resistance.
2. Molecular Techniques:
PCR for detecting bacterial DNA.
Serological tests for antibodies or antigens.
Diagnosis and Treatment of Bacterial Diseases
TREATMENT OPTIONS
1. Antibiotics:
Beta-lactams (e.g. penicillin), macrolides (e.g. erythromycin),
quinolones (e.g. ciprofloxacin).
Antibiotic stewardship to prevent resistance.
2. Supportive Care:
Intravenous fluids, oxygen therapy, symptomatic management.
3. Vaccines:
Examples: Bacillus Calmette-Guerin (BCG) for TB,
pneumococcal vaccines.
Diagnosis and Treatment of Bacterial
Diseases
TREATMENT OPTIONS
Traditional Medicines for Bacterial Infections
1. Herbal Antibacterials:
Garlic: Allicin exhibits strong antibacterial activity.
Turmeric: Curcumin reduces bacterial growth and inflammation.
Neem: Widely used for skin infections and ulcers.
2. Probiotic Therapy:
Yogurt and fermented foods promote gut health and fight harmful bacteria.
3. Essential Oils:
Tea tree oil, eucalyptus oil, and peppermint oil are effective for topical infections.
4. Honey-Based Treatments:
Manuka honey accelerates wound healing and prevents infections.
FUNGI
Fungi are a diverse group of eukaryotic organisms
membrane.
endoplasmic reticulum.
structural support.
3. Mode of Nutrition:
absorption.
2. Ascomycota
spores in sac-like structures.
3. Basidiomycota
structures called basidia.
4. Chytridiomycota
5. Glomeromycota
t roots.
Example: Rhizopus (bread mold).
Characteristics: Produce zygospores during sexual reproduction
1. Zygomycota
2. Ascomycota
spores in sac-like structures.
3. Basidiomycota
structures called basidia.
4. Chytridiomycota
5. Glomeromycota
t roots.
1. Zygomycota
oduction
3. Basidiomycota
structures called basidia.
4. Chytridiomycota
5. Glomeromycota
t roots.
1. Zygomycota
oduction
2. Ascomycota
spores in sac-like structures.
4. Chytridiomycota
5. Glomeromycota
t roots.
1. Zygomycota
oduction
2. Ascomycota
spores in sac-like structures.
3. Basidiomycota
structures called basidia.
Example: Batrachochytrium.
4. Chytridiomycota
Characteristics: Primitive fungi with flagellated spores.
5. Glomeromycota
t roots.
1. Zygomycota
oduction
2. Ascomycota
spores in sac-like structures.
3. Basidiomycota
structures called basidia.
4. Chytridiomycota
PROTOZOA
Health.
What are Protozoa?
Unicellular eukaryotic microorganisms.
Diverse in morphology, reproduction, and
PROTOZOA
specialized organelles (nucleus,
mitochondria).
Modes of reproduction:
Classification of Protozoa
asexual (binary fission) and
sexual.
Movement: through flagella,
1. Flagellates: Move using flagella. cilia, or pseudopodia.
PROTOZOA
sickness).
2. Amoeboid: Move using pseudopodia.
• Example: Entamoeba histolytica
(amoebiasis).
3. Ciliates: Move using cilia.
PROTOZOA
Sporozoite, merozoite, and
gametocyte stages.
Example: Entamoeba histolytica:
Fecal-oral transmission via cysts.
PROTOZOA
damage.
Amoebiasis
• Caused by Entamoeba histolytica.
• Symptoms: diarrhea, abdominal pain, liver
abscess.
Leishmaniasis
• Caused by Leishmania spp., transmitted by
2. Cestodes (Tapeworms):
Example: Taenia solium,
Echinococcus granulosus.
3. Trematodes (Flukes):
Example: Schistosoma spp.,
Fasciola hepatica. •What are Helminths?
Parasitic worms that
infect humans and
animals.
Three major groups:
nematodes, cestodes,
and trematodes.
•Importance in Medicine:
Cause significant
morbidity worldwide,
particularly in low-
resource settings.
Study of helminths
aids in understanding
parasitic infections,
immune responses, and
drug development.
Life Cycles of Helminths
Brief overview of life cycles (direct and
complex involving intermediate hosts).
Example:
• Ascaris lumbricoides: Fecal-oral
transmission.
• Schistosoma: Requires freshwater
snails as intermediate hosts.
Relevance to Medicine: Helps in
identifying infection sources and control
1.
Classification of Helminths
Nematodes (Roundworms):
measures.
Example: Ascaris lumbricoides,
Ancylostoma
duodenale.
2. Cestodes (Tapeworms):
Example: Taenia solium,
Echinococcus
granulosus.
3. Trematodes (Flukes):
Example: Schistosoma spp.,
Fasciola
hepatica.
Life Cycles of Helminths
Brief overview of life cycles (direct
and complex involving intermediate
hosts).
Example:
• Ascaris lumbricoides: Fecal-
oral transmission.
• Schistosoma: Requires
freshwater snails as
intermediate hosts.
Relevance to Medicine: Helps in
identifying infection sources and
control measures.
Diseases Caused by
Helminths
Nematodes: Ascariasis,
hookworm disease, lymphatic
filariasis.
Cestodes: Taeniasis, cysticercosis,
echinococcosis.
Trematodes: Schistosomiasis, liver
fluke disease.
Diseases Caused by
Helminths
Nematodes:
Ascariasis, hookworm
disease, lymphatic
filariasis.
Clinical Manifestations
Cestodes: Taeniasis,
cysticercosis,
echinococcosis.
Trematodes:
General Symptoms:
Schistosomiasis, liver
fluke disease.
Gastrointestinal distress,
anemia, malnutrition,
chronic inflammation.
Severe Cases:
Organ damage,
neurological complications
(e.g. neurocysticercosis),
immune modulation.
Diagnostic Methods
Stool examination for eggs
/larvae.
Serological tests (e.g. ELISA for
cysticercosis).
Imaging techniques (e.g.,
ultrasound, MRI for hydatid cysts).
Clinical
Manifestations
General Symptoms:
Gastrointestinal
distress, anemia,
malnutrition, chronic
inflammation.
Severe Cases:
Organ damage,
neurological
complications (e.g.
neurocysticercosis),
immune modulation.
Treatment Options
Anthelmintic Drugs:
Albendazole, mebendazole,
praziquantel.
Challenges: Drug resistance,
adverse effects, need for
mass drug administration in
Diagnostic Methods
endemic areas.
Stool examination for
eggs /larvae.
Serological tests (e.g.
ELISA for cysticercosis).
Imaging techniques
(e.g., ultrasound, MRI
for hydatid cysts).
Treatment Options
Anthelmintic Drugs:
Albendazole,
mebendazole,
praziquantel.
Challenges: Drug
resistance, adverse
effects, need for mass
drug administration in
endemic areas.
Prevention and
and developing therapies (e.g.
helminth therapy for autoimmune
conditions).
Control
Sanitation and hygiene.
Health education.
Mass deworming programs.
Development of vaccines
(e.g. for schistosomiasis).
PRIONS
The Unique Infectious Agents and Their
Medical Impact
Understanding Protein Misfolding and
Neurological Disorders
What are Prions?
•Misfolded proteins capable of causing
infectious diseases.
•Unique because they lack nucleic acids.
Discovery:Identified by Stanley
Prusiner in the 1980s, awarded the Nobel
Prize in Medicine in 1997.
Relevance to Medicine:Prions cause
fatal neurodegenerative diseases in
humans and animals.
Structure and Function of
Prions
Normal Prion Protein (PrP^C):
Found in the brain, role in cellular
signaling.
Pathogenic Prion Protein
(PrP^Sc): Misfolded version,
induces other proteins to misfold.
Illustrate structural differences
between PrP^C and PrP^Sc.
Mechanism of Prion
Propagation
Misfolded PrP^Sc interacts with
normal PrP^C, inducing
misfolding.
Aggregation of misfolded proteins
forms amyloid plaques.
Resistant to degradation, leading to
progressive accumulation.
Diseases Caused by Prions
Human Prion Diseases:
(CJD):Creutzfeldt-Jakob Disease
Sporadic, familial, or
acquired.
Variant CJD (vCJD): Linked
to bovine spongiform encephalopathy
(BSE or "mad cow disease").
Kuru: Associated with ritual
cannibalism in Papua New Guinea.
Fatal Familial Insomnia
(FFI): Rare genetic disorder affecting
sleep and the nervous system.
Clinical Manifestations
Neurological
Symptoms:
Rapidly progressive
dementia, ataxia, myoclonus.
• Behavioral changes,
hallucinations, and insomnia.
• Fatal Outcome:
Most prion diseases are
invariably fatal within months
to a few years.
Diagnostic Methods
Challenges in Diagnosis:
• Long incubation periods and
nonspecific early symptoms.
Tests:
• Cerebrospinal fluid (CSF) biomarkers
(e.g. 14-3-3 protein).
• MRI findings (e.g. cortical ribboning).
• Brain biopsy or autopsy for definitive
diagnosis.
Emerging diagnostic tools:
• Like RT-QuIC (real-time quaking-
Induced Conversion assay) can be
used as well.
Current Status: Research
No cure or effective Directions:
Treatment treatment for prion Investigating small
Options diseases. molecules to inhibit
Focus on prion aggregation.
supportive care. Gene therapy and
monoclonal
antibodies.
Prions and Transmission Preventive
Public Health Risks: Measures:
Contaminated surgical Strict sterilization
instruments or tissue protocols in hospitals.
transplants. Surveillance of animal
Consumption of health and food safety.
infected meat (e.g.,
BSE causing vCJD).
Prions and Medicine
Scientific Insights:
• Study of prions enhances understanding of
other protein misfolding diseases, such as
Alzheimer’s, Parkinson’s, and Huntington’s.
Biotechnology Applications:
• Prion-like properties are being studied for
synthetic biology and protein engineering.
MODE OF TRANSMISSION MECHANISM EXAMPLES OF DISEASES
Infectious agent
VERTICAL Includes direct and
spreads from person to
TRANSMISSION indirect transmission.
person in a group.