BCH408 2023
BCH408 2023
•The branch of biomedical sciences that deals with the chemical aspects of
immunology, including response of an organism to antigenic challenge, the
recognition of self from non-self & all the biological (in vivo), serological (in
vitro) & physicochemical aspects of immunity.
Basic Definitions
•Antigens (Ag): This is any substance that can induce the formation of
antibodies & is capable of reacting specifically with the antibodies so-produced,
under appropriate conditions.
•The term immunity, derived from the Latin “immunis” (meaning exempt), refers
to naturally acquired protection/defense against diseases e.g. measles &
smallpox.
•The immune response involves recognizing any foreign material & mounting a
reaction to eliminate it.
•There are 2 categories of immune response:
&
i. Natural mechanical barriers, e.g. the integrity of the epidermis & mucosal
membranes;
ii. Natural physicochemical barriers, e.g. the acidity of the stomach fluid;
iv. Normal intestinal transit & normal flow of bronchial secretions & urine, which
eliminate infectious agents from the respective systems;
•As a rule, acquired immunity is induced during the life of the individual as part
of the complex sequence of events designated as the immune response.
•In vertebrates, the innate responses trigger the acquired immune responses, &
both work together to eliminate the pathogens.
Table. Characteristics of innate versus adaptive (acquired) immunity
Specificity:
•Thus, only those lymphocytes with specific receptors for the Ag in question will
be activated.
Memory:
•This refers to the ability of the immune system to exert progressively more
intense specific responses to repeated exposures to a given Ag.
•The increase in the magnitude & duration of the immune response with
repeated exposure to the same Ag (i.e. memory of immune response) is due to
the proliferation of Ag-specific lymphocytes after each exposure.
•The numbers of responding cells will remain increased even after the immune
response subsides.
•Thus, whenever the organism is exposed again to that particular Ag, there is
an expanded population of specific lymphocytes available for activation.
•The 1st stage (induction) involves a small lymphocyte population with specific
receptors able to recognize an Ag or a fragment generated by specialized cells
known as Ag-presenting cells (APC).
•In the 2nd stage (amplification), the proliferation & differentiation of Ag-
responding lymphocytes is usually enhanced by amplification systems involving
APC & specialized T-cell sub-populations (T-helper cells).
•In the 3rd stage (effector), there is the production of effector molecules
(antibodies) and the differentiation of effector cells.
•Effectors cell are cells that directly or indirectly mediate the elimination of
undesirable elements.
•Passive acquired immunity does not involve the host’s immune response at all.
•Passive immunity occurs when preformed Ab or T-cells are transferred from a
donor to the recipient.
•It may be natural, as during pregnancy when maternal Ab cross the placenta
to the fetus, or artificially, as when Ab is injected to fight against a specific
disease.
1. Humoral
2. Cell-mediated
Humoral Immune Responses:
•The Ab circulate in the bloodstream & permeate other body fluids, where they
bind specifically to the foreign Ag that stimulated their production.
•Ab binding also marks invading pathogens for destruction, mainly by making it
easier for phagocytic cells of the innate immune system to ingest them.
Cell-mediated Immune Responses:
•T-cells can efficiently detect pathogenic microbes hiding inside host cells &
either kill the infected cells or help the infected cells or other cells to eliminate
the microbes.
•E.g., the T-cell might kill a virus-infected host cell that has viral Ag on its
surface, thereby eliminating the infected cell before the virus can replicate.
•In other cases, the T-cell produces signal molecules that either activate
macrophages to destroy the microbes that they have phagocytosed or help
activate B-cells to make Ab against the microbes.
Figure. The 2 main types of adaptive immune responses.
Notes:
•In the figure in the preceding slide, the lymphocytes are responding to a viral
infection.
•In both cases, innate immune responses help activate the adaptive immune
responses.
THE CELLS OF THE IMMUNE SYSTEM
Lymphocytes
•Lymphocytes are the white blood cells, involved in the elimination of potentially
harmful organisms or compounds.
•They make up ~ 20% of the white blood cells present in the adult circulation.
•Mature lymphoid cells (cells that secrete lymph – body fluids containing white
blood cells, majorly lymphocytes) are long-lived & may survive for many yrs as
memory cells.
•They are found in the peripheral blood & in all lymphoid tissues.
Sub-populations of lymphocytes:
1.B-lymphocytes:
•Mainly derived from bone marrow cells in higher animals & from the bursa of
Fabricius in birds.
•T-lymphocytes have a longer life span than B-lymphocytes, & thus, are
involved in immunological memory.
Sub-populations of T-lymphocytes & their functions:
a. Helper T-lymphocytes (TH), which are involved in the induction & regulation
of immune responses.
i. TH1 lymphocytes, which assist the differentiation of cytotoxic cells & also
activate macrophages, which after activation play a role as effectors of the
immune response.
•In addition, these cells also deliver activating signals to lymphocytes engaged
in Ag recognition, both in the form of soluble mediators (interleukins such as IL-
12 & IL-1) & in the form of signals delivered by cell-cell contact.
Fig. Development & differentiation of lymphocytes from pluripotential stem cells
Table. Lymphocytes involved in immune response
Antigens (Ag) & Antibodies (Ab):
•An adult human being has the capability of recognizing millions of different
Ag, some of microbial origin, others present in the environment, & even some
artificially synthesized.
B. Antibodies are proteins that appear in circulation after immunization &
that have the ability to react specifically with the Ag used to immunize.
•Because Ab are soluble & are present in virtually all body fluids (“humors”), the
term humoral immunity was introduced to designate the immune responses in
which Ab play the principal role as effector mechanisms.
ANTIGEN-ANTIBODY REACTIONS
•An important distinction is that Ag-Ab is reversible & does not lead to chemical
alteration in either the Ab or the Ag, in that it can be prevented or dissociated
by high ionic strength or extreme pH.
•These assays differ in their speed & sensitivity; some are strictly qualitative,
others are quantitative.
diagnosing diseases;
•Highly specific
•Reversible
•Non-covalent.
Electrostatic (ionic or electrovalent) bonds:
•Results from the attraction btw oppositely charged ionic groups of 2 protein
side chains, e.g., an ionized amino group (NH 4+) on a lysine in the Ab, & an
ionized carboxyl group (COO-) on an aspartate residue in the Ag.
Hydrogen bonds:
•When the Ag & Ab are in very close proximity, relatively weak H bonds can be
formed btw hydrophilic groups (e.g., OH & C=O; NH & C=O; & NH & OH
groups).
•Hydrophobic groups, e.g. the side chains of valine, leucine, & phenylalanine,
tend to associate due to Van der Waals bonding & coalesce in an aqueous
environment, excluding H2O from their surroundings.
•Thus, the distance btw them decreases, enhancing the energies of attraction
involved.
•Depends upon interactions btw the “electron clouds” that surround the Ag & Ab
molecules.
•The interaction has been compared to that which might exist btw alternating
dipoles in 2 molecules, alternating in such a way that at any given moment
oppositely oriented dipoles will be present in closely apposed areas of the Ag &
Ab molecules.
•Fig. The 4 non-covalent forces that determines the strength of Ag-Ab interaction
Cross-Reactivity
•Although Ag-Ab reactions are highly specific, in some cases Ab elicited by one
Ag can cross-react with an unrelated Ag.
•E.g., the ABO blood-group Ag are glycoproteins expressed on red blood cells.
•An individual lacking 1 or both of these Ag will have serum Ab to the missing
Ag.
•The Ab are induced not by exposure to red blood cell Ag but by exposure to
cross-reacting microbial Ag present on common intestinal bacteria.
•These microbial Ag induce the formation of Ab in individuals lacking the similar
blood-group antigens on their red blood cells.
• The blood-group Ab, although elicited by microbial Ag, will cross-react with
similar oligosaccharides on foreign red blood cells, providing the basis for blood
typing tests & accounting for the necessity of compatible blood types during
blood transfusions.
•A type A individual has anti-B Ab; a type B individual has anti-A; and a type O
individual thus has anti-A and anti-B.
Table. Cross-reactivity in ABO blood types
Precipitation Reactions
•Ab & soluble Ag interacting in aqueous solution form a lattice that eventually
develops into a visible precipitate.
Formation of an Ag-Ab lattice depends on the valency of both the Ab & Ag:
1.The Ab must be bivalent; a precipitate will not form with monovalent Fab
fragments.
2.The Ag must be either bivalent or polyvalent; that is, it must have at least two
copies of the same epitope, or have different epitopes that react with different
antibodies present in polyclonal antisera.
Agglutination Reactions
•Agglutination reactions are routinely performed to type red blood cells (RBCs).
•In typing for the ABO Ag, RBCs are mixed on a slide with antisera to the A or B
blood-group Ag.
•If the Ag is present on the cells, they agglutinate, forming a visible clump on
the slide.
•Determination of which Ag is present in donor & recipient RBCs is the basis for
matching blood types for transfusions.
Bacterial agglutination is used to diagnose infection
•The last tube showing visible agglutination will reflect the serum Ab titer of the
patient.
•The agglutinin titer is defined as the reciprocal of the greatest serum dilution
that elicits a positive agglutination reaction.
•E.g., if serial twofold dilutions of serum are prepared & if the dilution of 1/640
shows agglutination but the dilution of 1/1280 does not, then the agglutination
titer of the patient’s serum is 640.
•Patients with typhoid fever, e.g., show a significant rise in the agglutination titer
to Salmonella typhi.
Structure
•Immunoglobulins contain a minimum of 2 identical light (L) chains (23 kDa) & 2
identical heavy (H) chains (53–75 kDa), held together as a tetramer (L2H2) by
disulfide bonds between cysteine residues in the chains.
Fig. Structure of an Immunoglobulin
Fig. Structure of an IgG
Variable (V) Region:
•The amino acid N-terminal domains of the heavy & light chains form the Ag-
binding site.
•The amino acid residues of this domain vary between different Ab molecules &
are thus known as the variable (V) regions: VL in light chains & VH in heavy.
•Most of the differences reside in the hypervariable areas of the molecule & are
usually only 6 to 10 amino acid residues in length.
•When the hypervariable regions in each chain come together along with the
counterparts on the other pair of H & L chains, they form the Ag-binding site.
•This part of the molecule is unique to the molecule and is known as the
idiotype determinant.
Constant (C) Region:
•The part of the Ab structure next to the variable region is called the constant
(C) region.
•It is made up of 1 domain in the light chain (CL) & 3 or 4 in the heavy chain
(CH).
• A CL chain may consist of either 2 kappa (κ) or 2 lambda (λ) chains but never
1 of each.
•Approximately 60% of all the human Ab molecules contain κ chains, while 40%
contain λ chains.
•These different types of the CH domain (γ, α, μ δ, and ε) determine the class
(isotype) of the Ab, & thereby the physiological function of a particular Ab.
Hinge Region:
•The light & heavy chains enclose an extended peptide chain between the C H1
& CH2 domains that have no homology with the other domains.
•The region is rich in proline residues & flexible, giving IgG, IgD, & IgA
segmental flexibility.
•As a result, the 2 Fab (fragment containing the Ag binding site) arms can
assume various angles to each other when Ag is bound.
Classes of Immunoglobulin
•There are 5 immunoglobulin classes in humans: IgG, IgA, IgM, IgD, & IgE.
•IgG is the most abundant in serum, constituting about 80% of the total serum
immunoglobulin.
•There are 4 IgG subclasses in human designated: IgG1, IgG2, IgG3, & IgG4,
according to their declining average of serum concentrations.
•IgG1, IgG3, & IgG4 can cross the placenta & play an important role in
protecting the developing fetus.
Immunoglobulin M (IgM)
•Breast milk contains secretory IgA & many other molecules that help protect
the newborn against infection during the first months of life, when its immune
system is not fully functional.
Immunoglobulin E (IgE)
•IgD constitutes about 0.2% of the total immunoglobulin in serum, & has a
serum concentration of 30 mg/mL.
•IgD was first discovered when a patient developed a multiple myeloma whose
myeloma protein failed to react with anti-isotype antisera against the then
known isotypes: IgA, IgM, & IgG.
Table. Properties of human immunoglobulins
Table. Major functions of immunoglobulins
THE COMPLEMENT SYSTEM
•The complement system comprises some heat-labile proteins that normally exist as
inactive precursors in the plasma that help in the opsonization of pathogenic
microorganisms & immune complexes.
•It is a highly conserved innate immune cascade of at least 20 serum proteins &
glycoproteins that interact to recognize & kill pathogens.
•The major actors in this system are 11 proteins designated C1 to C9, B, & D.
•The Fc regions of Ag-bound IgG or IgM then bind & activate the complement system.
•The synthetic rates for the various complement glycoproteins increase when
complement is activated & consumed.
•Activation of the complement cascade is one of the major mechanisms for initiating
inflammation, which results in the production of powerful opsonins, chemoattractants,
& anaphylatoxins that can directly mediate cell killing through lysis.
•The key event in complement activation is the proteolytic cleavage of C3 to C3a &
C3b.
•C3 cleavage leads on to the activation of the terminal complement pathway, causing
the generation of the membrane attack complex (MAC), which assembles a lipophilic
complex capable of lyzing the plasma membranes of susceptible cells.
Pathways of the Complement System Activation
•When an Ab binds with an Ag, a specific reactive site on the “constant” portion of the
Ab becomes exposed (“activated”).
•This in turn binds directly with the C1 molecule of the complement system, thereby
initiating a cascade of sequential reactions beginning with activation of the proenzyme
C1 itself.
•The active C1 enzymes formed then activate successively increasing quantities of
other enzymes in the later stages of the system.
•Multiple end products are formed, which help prevent damage to the body’s tissues
caused by the invading organism or toxin.
The Alternative pathway:
• The initial steps of this process are quite different from those of the classical pathway
& involve several unique serum components, namely factor P (properdin) & factors B
& D.
Fig. Activation & regulation of the complement system.
1.Opsonization & phagocytosis:
•C3b (one of the products of the complement cascade), strongly activates phagocytosis
by both neutrophils & macrophages, causing these cells to engulf the bacteria to which
the Ag-Ab complexes are attached.
•This process is called opsonization. It often enhances the number of bacteria that can
be destroyed by many hundredfold.
2.Chemotaxis :
•Fragment C5a initiates chemotaxis of neutrophils & macrophages, thus causing large
numbers of these phagocytes to migrate into the tissue area adjacent to the antigenic
agent.
3.Cytolysis:
•The complement system destroys target cells through lysis of the cell membrane.
•This is termed cytotoxicity in the case of nucleated cells, hemolysis for erythrocytes,
or bacteriolysis in the case of bacteria.
•It has a direct effect of rupturing the cell membranes of bacteria or other invading
organisms.
4.Anaphylotoxin activity:
•Fragments C3a, C4a, & C5a stimulate the mast cells to release histamine & other
substances, resulting in increased capillary permeability & local accumulation of fluid
in the tissue.
•These substances in turn cause increased local blood flow, increased leakage of fluid
& plasma protein into the tissue, & other local tissue reactions that help inactivate or
immobilize the antigenic agent.
5.Tissue damage:
Both the lytic complex & the inflammatory PMN's can cause considerable damage to
normal tissues, e.g. in an Arthus Reaction or in Immune Complex Disease.
6. Agglutination:
•The complement products also change the surfaces of the invading organisms, causing
them to adhere to one another, thus promoting agglutination.
7. Neutralization of viruses:
•The complement enzymes & other complement products can attack the structures of
some viruses , making them non-virulent.
Hypersensitivity & Allergy
•Immune response, which major function is to neutralize or destroy the invading
organisms or Ag, can, in some instances cause disease resulting from its
undesirable effect directed against an exogenous Ag, or as a consequence of
an autoimmune reaction.
•the nature of the cellular infiltrate present in the sites of a typical reaction.
Table. General characteristics of the 4 types of hypersensitivity reactions as
defined by Gell & Coombs
Type I Hypersensitivity Reactions (Allergies)
Characteristics:
•Immediate or very rapid (observed within a few minutes after the challenge);
•IgE-mediated, i.e. depends on interaction btw Ag & IgE attached to mast cells
(derived from haemopoietic stem cells in the bone marrow);
•Clinical examples: allergic rhinitis (hay fever), allergic asthma & some food
reactions e.g. peanut hypersensitivity.
•Any substance which can elicit an allergic response is referred to as an
allergen.
•An allergen can only be effective in eliciting an allergic reaction if the recipient
has been previously sensitized; i.e., there must be present, in the recipient’s
tissues, Ab of the IgE class directed against the allergen.
•Most Ag stimulating IgE are either inhaled or ingested. E.g. of the inhaled Ag is
ragweed pollen.
•Allergic reactions may be elicited by exposure through the air (pollen), contact
with the skin (cosmetics), ingestion (natural or artificial food products), or
injection (drugs or insect bites).
•IgE, the mediators of Type I hypersensitivity reaction, are also known as
reagins or reaginic Ab.
•They are homocytotropic; meaning that they are capable of binding to their
own mast cells & initiate allergic reaction.
•IgE is the major mediator of allergy, although in humans IgG4 can also carry
out this function with lower efficiency.
•IL-4 & IL-13 stimulate IgE production while IFN-γ inhibits it.
•E.g. rabbit IgG can cause allergic responses when transferred to guinea pigs,
but it’s unable to do so in the rabbit.
Sequence of Events in Allergic Responses
Sensitization Phase
•This induction of IgE synthesis must precede the allergic reaction itself.
•Mast cells have Fc receptors on their surface with an extremely high affinity for
IgE Ab.
Reaction Phase
•The large, basophilic granules present in the mast cells are released into the
tissues.
•These conditions may range from very mild to severe, & are potentially fatal
(e.g., in the case of severe asthma or vascular anaphylaxis).
•The nature & severity of allergic reactions depends on the route of exposure &
the degree of sensitization, it varies considerably from one species to another,
& among humans may vary tremendously btw different individuals.
Table: Pharmacologically active compounds involved in allergy, & their effects
Early-phase versus Late-phase Allergic Reactions
Examples:
•In the case of an allergic skin reaction (e.g. Prausnitz-Küstner), the early or
immediate phase occurs within a few minutes.
•But, over the course of subsequent hours & days, a cellular infiltrate
dominated by eosinophils will develop, which also includes neutrophils,
macrophages & TH2 cells.
•In asthmatic reactions, the late-phase response may be manifested by a
chronic inflammation & hypersensitivity of the bronchi, with important diagnostic
& therapeutic implications.
•To be able to manage allergic patients, it’s important to have a simple &
accurate laboratory test to determine the specificity & severity of any allergy.
•IgE levels, & skin sensitivity to specific Ag, can be monitored in such patients.
•Results of both assays correlate poorly with the degree of clinical allergy;
however, the result of RAST is somewhat better than that of RIST
•The less satisfactory results of these assays reflect the high degree of
variability among different people in the following:
iv.the sensitivity of various tissues to the effector molecules & the inflammatory
response.
•The patient is placed on a diet free of the most common sources of allergens
(wheat & related grains, dairy products, eggs, etc.), & various foods are added
one at a time over a period of weeks or months to determine which may be
responsible for the allergic response.
Treatment of Allergic Reaction
Treatment Strategies:
•This may include eliminating known allergens from one’s diet (e.g. nuts,
milk, eggs), removing them from one’s home (e.g. wool carpets, feather
pillows, pets & plants), & avoiding drugs to which one is sensitive (penicillin,
quinin & its derivatives).
2.Desensitization: This involves deliberate immunization with small but
increasing amounts of a particular purified allergen over a period of months or
yrs.
•The effectiveness of this procedure results from the induction of high levels
of IgG Ab, which can prevent allergic reactions by competing for the allergen &
preventing it from reaching mast-cell bound IgE.
•Desensitization has been useful for pollen & dust allergens as well as for some
animal danders (scales of hair or feathers), but its effectiveness is
unpredictable & varies btw individuals.
Examples:
Characteristics:
•Cell-bound
I. Intravascular hemolysis:
•If the Ab are of the IgM isotype, complement is activated up to C9, & the red
cells can be directly hemolyzed.
• If the Ab (usually IgG) fail to activate the full complement cascade, the red
cells will be opsonized with Ab (& possibly C3b,& are taken up & destroyed
by phagocytic cells expressing Fcg & C3b receptors.
•The preformed Ab goes to the site of the injected Ag & forms a complex,
thereby inducing complement activation & neutrophil attraction.
•Occurs 36 - 48 hours after Ag exposure & differs pathologically from the first 3
types of hypersensitivity which are all Ab-mediated.
•Causes the local response that occurs on intradermal tuberculin testing in TB-
sensitized individuals & for the skin manifestations of contact hypersensitivity.
•T cells drive this reaction when they react with Ag & release TH1 cytokines.
•The cytokines in turn attract other cells, such as macrophages, which release
their lysosomal enzymes.
E.g. of this type of reaction is seen when PPD (purified protein derivative) is
injected into the skin of a person who has been previously infected with the
tuberculosis organism.