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Bridging the Completeness of Big Data on Databricks
Yanyan Wu
VP of Data
Wood Mackenzie, Verisk
Chao Yang
Director of Data
Wood Mackenzie, Verisk
Acknowledgement
• This work was based on US patent application number
63/142,551 filed on 01/28/2021
• Thanks to the coinventors’ support: Bernard Ajiboye,
Hugh Hopewell, Rhodri Thomas @Wood Mackenzie
(Verisk)
Agenda
• Introduction & use cases
• Limitation of existing approaches
• Null filling processes
• Similarity discovery
• Collaborative AI
• AI model management
• Our application
• Application tips
Why?
Null values existed almost in all data set
Limited data or Key data can’t be thrown away just
because null existed in some attributes
Machine learning models do not work with null values
very well
The importance of data completeness
Our Data Platform for Clients - LENS
Energy data powerhouse augmented by world-class platform
Upstream
conventional
Oil & Gas
Discover, model and
value upstream data
worldwide
Unconventional
Oil & Gas
Operational analysis for
improved business
performance
Subsurface
Analytics-ready,
global subsurface data
to optimise your
resource portfolios
with confidence
Data Directly Integrated Into Clients' System
Power &
Renewables
Navigate the energy
transition by connecting
the dots across the
electricity value chain
Issues with existing null filling methods
Low accuracy for backward or forward filling, filling
with fixed values or statists metric (min, max, mean)
Time consuming when using machine learning or
regression methods
Isolated, does not take account other attributes into
filling nulls for one attribute
We need a new method that can fill nulls with better speed & accuracy
Lens Data Platform
Apache Sedona MLflow
Databricks: Unified Platform
Parquet files on AWS
S3
Spark MLlib
Build with Spark
Parquet data files with null values
in S3
Neighbor discovery
1. Spatial RDD partitioned by
KDB tree
2. Distance based spatial join
3. Replace null values with
neighbor information
4. Save data in Delta Lake
Collaborative AI model
1. Label encoding
2. Remove noise
3. Bin to create userID group
4. Reformat for ALS model
Enriched data with high
completeness
• 02
• 01 • 03
AI model management
1. Used ML pipeline & cross
validation
2. Saved model hyper parameters
with MLFlow
3. Set model to production stage
01. Neighbor discovery
• Discover neighbors of every entity (oil well)
within defined limit
• Challenges:
• Large data size
• Long compute time
• Limited compute power on single machine
• Apache Sedona:
• Distributed framework for processing large-scale spatial data
• KDB-Tree
• Geometrical approach
• Subsequently divide data into a n-dimensional space
• Tree structure and fast query processing
Distributed spatial data partitioning on Spark
• Load data
• Create geometry object column
• Set up Spark context
• Import libraries
01. Neighbor discovery
Distributed spatial data partitioning on Spark
• Distance join
• Convert to DataFrame
01. Neighbor discovery
Distributed spatial data partitioning on Spark
• Create Spatial RDD
• Create Circle RDD with
defined range
• Partition data by KDB tree
01. Neighbor discovery
Distributed spatial data partitioning on Spark
02. Collaborative AI
• Like popular methods used for movie recommendation
• Leverage ALS (Alternating Least Squares) model from Spark MLlib
• Code example: https://spark.apache.org/docs/latest/mllib-collaborative-filtering.html
• Mapping:
• UserID: each object or each object group (better to use group due to noise in data)
• Item: attributes of the object
• Rating: attributes’ value
Leverage Spark MLlib
02. Collaborative AI
Spark MLlib: ALS and Pipeline
• ML pipeline
• Grid search
• Cross Validation
02. Collaborative AI
Transform data to fit the format required by ALS
03. AI model management
Use MLFlow to manage model revisions/stages
Our Application Result
• 314,000+ of well objects with >20
attributes with missing values
• Neighbor discovery
• <10 mins to generate 144,000,000+ neighbor combinations
• Fill null with Similarity
• Null reduction: Vertical_depth 36%->9.5% and lateral_length 46%-
>14%
• Fill null with collaborative AI
• 3.7 million training records (80% training, 20% testing).
• Took 5 minutes to train with grid search and cross validation on
Databricks
• Null reduction: to 0% null value
• Accuracy: error% is 7% to 18% for key attributes.
On Oil&Gas Unconventional Well Data
Tips for Applications
• Remove outliers in the training data for AI model
• No need to normalize the value
• Form object UserId groups to deal with the noise in the data for AI
model
• More attributes, more data leads to a higher accuracy
• Accuracy is higher for non-derived attributes (higher accuracy for the
attributes with less noise)
Attention to details
Thank you!
Questions?
Feedback
Your feedback is important to us.
Don’t forget to rate and review the sessions.
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Bridging the Completeness of Big Data on Databricks

  • 1. Bridging the Completeness of Big Data on Databricks Yanyan Wu VP of Data Wood Mackenzie, Verisk Chao Yang Director of Data Wood Mackenzie, Verisk
  • 2. Acknowledgement • This work was based on US patent application number 63/142,551 filed on 01/28/2021 • Thanks to the coinventors’ support: Bernard Ajiboye, Hugh Hopewell, Rhodri Thomas @Wood Mackenzie (Verisk)
  • 3. Agenda • Introduction & use cases • Limitation of existing approaches • Null filling processes • Similarity discovery • Collaborative AI • AI model management • Our application • Application tips
  • 4. Why? Null values existed almost in all data set Limited data or Key data can’t be thrown away just because null existed in some attributes Machine learning models do not work with null values very well The importance of data completeness
  • 5. Our Data Platform for Clients - LENS Energy data powerhouse augmented by world-class platform Upstream conventional Oil & Gas Discover, model and value upstream data worldwide Unconventional Oil & Gas Operational analysis for improved business performance Subsurface Analytics-ready, global subsurface data to optimise your resource portfolios with confidence Data Directly Integrated Into Clients' System Power & Renewables Navigate the energy transition by connecting the dots across the electricity value chain
  • 6. Issues with existing null filling methods Low accuracy for backward or forward filling, filling with fixed values or statists metric (min, max, mean) Time consuming when using machine learning or regression methods Isolated, does not take account other attributes into filling nulls for one attribute We need a new method that can fill nulls with better speed & accuracy
  • 7. Lens Data Platform Apache Sedona MLflow Databricks: Unified Platform Parquet files on AWS S3 Spark MLlib Build with Spark Parquet data files with null values in S3 Neighbor discovery 1. Spatial RDD partitioned by KDB tree 2. Distance based spatial join 3. Replace null values with neighbor information 4. Save data in Delta Lake Collaborative AI model 1. Label encoding 2. Remove noise 3. Bin to create userID group 4. Reformat for ALS model Enriched data with high completeness • 02 • 01 • 03 AI model management 1. Used ML pipeline & cross validation 2. Saved model hyper parameters with MLFlow 3. Set model to production stage
  • 8. 01. Neighbor discovery • Discover neighbors of every entity (oil well) within defined limit • Challenges: • Large data size • Long compute time • Limited compute power on single machine • Apache Sedona: • Distributed framework for processing large-scale spatial data • KDB-Tree • Geometrical approach • Subsequently divide data into a n-dimensional space • Tree structure and fast query processing Distributed spatial data partitioning on Spark
  • 9. • Load data • Create geometry object column • Set up Spark context • Import libraries 01. Neighbor discovery Distributed spatial data partitioning on Spark
  • 10. • Distance join • Convert to DataFrame 01. Neighbor discovery Distributed spatial data partitioning on Spark • Create Spatial RDD • Create Circle RDD with defined range • Partition data by KDB tree
  • 11. 01. Neighbor discovery Distributed spatial data partitioning on Spark
  • 12. 02. Collaborative AI • Like popular methods used for movie recommendation • Leverage ALS (Alternating Least Squares) model from Spark MLlib • Code example: https://spark.apache.org/docs/latest/mllib-collaborative-filtering.html • Mapping: • UserID: each object or each object group (better to use group due to noise in data) • Item: attributes of the object • Rating: attributes’ value Leverage Spark MLlib
  • 13. 02. Collaborative AI Spark MLlib: ALS and Pipeline • ML pipeline • Grid search • Cross Validation
  • 14. 02. Collaborative AI Transform data to fit the format required by ALS
  • 15. 03. AI model management Use MLFlow to manage model revisions/stages
  • 16. Our Application Result • 314,000+ of well objects with >20 attributes with missing values • Neighbor discovery • <10 mins to generate 144,000,000+ neighbor combinations • Fill null with Similarity • Null reduction: Vertical_depth 36%->9.5% and lateral_length 46%- >14% • Fill null with collaborative AI • 3.7 million training records (80% training, 20% testing). • Took 5 minutes to train with grid search and cross validation on Databricks • Null reduction: to 0% null value • Accuracy: error% is 7% to 18% for key attributes. On Oil&Gas Unconventional Well Data
  • 17. Tips for Applications • Remove outliers in the training data for AI model • No need to normalize the value • Form object UserId groups to deal with the noise in the data for AI model • More attributes, more data leads to a higher accuracy • Accuracy is higher for non-derived attributes (higher accuracy for the attributes with less noise) Attention to details
  • 19. Feedback Your feedback is important to us. Don’t forget to rate and review the sessions.