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NOSQL Databases and
      Neo4j
Database and DBMS
• Database - Organized collection of data
• The term database is correctly applied to the
  data and their supporting data structures.

• DBMS - Database Management System: a
  software package with computer programs
  that controls the creation, maintenance and
  use of a database.
Types of Happening Databases
• Relational database – nothing new but still in use
  and it seems it will always be a happening one.
• Cloud databases – everything is cloudy.
• Data warehouse – Huge! Huge! Huge! archives.
• Embedded databases – you can’t see them :P
• Document oriented database – the In thing.
• Hypermedia database – WWW.
• Graph database – facebook, twitter, social
  network.
NOSQL is simply…



Not OnlySQL
Why NOSQL now?

   Driving trends
Trend 1: Data Size
3000

                                   2011?
2500

2000

1500

                            2010
1000

 500                 2009
       2007   2008
  0
Trend 2: Connectedness
                                                                                          GGG
                                                                                 Onotologies

                                                                              RDFa


                                                                         Folksonomies
Information connectivity




                                                               Tagging

                                                     Wikis

                                                               UGC

                                                       Blogs

                                                    Feeds


                                        Hypertext
                              Text
                           Documents
Trend 3: Semi-structured information
• Individualisationof content
  – 1970’s salary lists, all elements exactly one job
  – 2000’s salary lists, we need many job columns!
• Store more data about each entity
• Trend accelerated by the decentralization of
  content generation
  – Age of participation (“web 2.0”)
Trend 4: Architecture
1980’s: Single Application




                             Application




                                 DB
Trend 4: Architecture
1990’s: Integration
Database Antipattern



           Application   Application   Application




                             DB
Trend 4: Architecture
2000’s: SOA

                   RESTful, hypermedia, composite apps

              Application        Application             Application




                  DB                 DB                      DB
Side note: RDBMS performance
 Salary list



               Most Web apps



                               Social Network



                                          Location-based services
Four NOSQL Categories
Four NOSQL Categories
Key-Value Stores
• “Dynamo: Amazon’s Highly Available Key-
  Value Store” (2007)
• Data model:
  – Global key-value mapping
  – Highly fault tolerant (typically)
• Examples:
  – Riak, Redis, Voldemort
Column Family (BigTable)
• Google’s “Bigtable: A Distributed Storage
  System for Structured Data” (2006)
• Data model:
  – A big table, with column families
  – Map-reduce for querying/processing
• Examples:
  – HBase, HyperTable, Cassandra
Document Databases
• Data model
  – Collections of documents
  – A document is a key-value collection
  – Index-centric, lots of map-reduce
• Examples
  – CouchDB, MongoDB
Graph Databases
• Data model:
  – Nodes with properties
  – Named relationships with properties
  – Hypergraph, sometimes
• Examples:
  – Neo4j (of
    course), SonesGraphDB, OrientDB, InfiniteGraph,
    AllegroGraph
Why Graph Databases?
• Schema Less and Efficient storage of Semi Structured Information
• No O/R mismatch – very natural to map a graph to an Object
  Oriented language like Ruby.
• Express Queries as Traversals. Fast deep traversal instead of slow
  SQL queries that span many table joins.
• Very natural to express graph related problem with traversals
  (recommendation engine, find shortest parth etc..)
• Seamless integration with various existing programming languages.
• ACID Transaction with rollbacks support.
• Whiteboard friendly – you use the language of node,properties and
  relationship to describe your domain (instead of e.g. UML) and
  there is no need to have a complicated O/R mapping tool to
  implement it in your database. You can say that Neo4j is
  “Whiteboard friendly” !(http://video.neo4j.org/JHU6F/live-graph-
  session-how-allison-knows-james/)
Social Network “path exists”
              Performance
• Experiment:
  • ~1k persons                           # persons query time

  • Average 50 friends per   Relational   1000      2000ms
                             database
    person
  • pathExists(a,b)
    limited to depth 4
Social Network “path exists”
              Performance
• Experiment:
  • ~1k persons                           # persons query time

  • Average 50 friends per   Relational   1000      2000ms
                             database
    person
                             Neo4j        1000      2ms
  • pathExists(a,b)
    limited to depth 4
Social Network “path exists”
              Performance
• Experiment:
  • ~1k persons                           # persons query time

  • Average 50 friends per   Relational   1000      2000ms
                             database
    person
                             Neo4j        1000      2ms
  • pathExists(a,b)
                             Neo4j        1000000   2ms
    limited to depth 4
What are graphs good for?
•   Recommendations
•   Business intelligence
•   Social computing
•   Geospatial
•   Systems management
•   Web of things
•   Genealogy
•   Time series data
•   Product catalogue
•   Web analytics
•   Scientific computing (especially bioinformatics)
•   Indexing your slow RDBMS
•   And much more!
Graphs
Directed Graphs
Breadth First Search
Depth First Search


  ?????????????????
Graph Databases


• A graph database stores data in a graph, the
  most generic of data structures, capable of
  elegantly representing any kind of data in a
  highly accessible way.
Graphs
• “A Graph —records data in→ Nodes —which
  have→ Properties”
Graphs
• “Nodes —are organized by→ Relationships —
  which also have→ Properties”
Query a graph with Traversal
• “A Traversal —navigates→ a Graph; it —
  identifies→ Paths —which order→ Nodes”
Indexes
• “An Index —maps from→ Properties —to
  either→ Nodes or Relationships”
Neo4j is a Graph Database
• “A Graph Database —manages a→ Graph and
  —also manages related→ Indexes”
Neo4j – Hey! This is why I am a Graph
             Database.
• The fundamental units that form a graph are
  nodes and relationships.

• In Neo4j, both nodes and relationships can
  contain properties.

• Nodes are often used to represent
  entities, but depending on the domain
  relationships may be used for that purpose as
  well.
Node in Neo4j
Relationships in Neo4j
• Relationships between nodes are a key part of
  Neo4j.
Relationships in Neo4j
Twitter and relationships
Properties
• Both nodes and relationships can have
  properties.
• Properties are key-value pairs where the key is
  a string.
• Property values can be either a primitive or an
array of one primitive type.
  For example String, int and int[] values are
  valid for properties.
Properties
Paths in Neo4j
• A path is one or more nodes with connecting
  relationships, typically retrieved as a query or
  traversal result.
Traversals in Neo4j
• Traversing a graph means visiting its nodes,
  following relationships according to some rules.

• In most cases only a subgraph is visited, as you
  already know where in the graph the interesting
  nodes and relationships are found.

• Traversal API

• Depth first and Breadth first.
Starting and Stopping
Preparing the database
Wrap mutating operations in a
       transaction.
Creating a small graph
Print the data
Remove the data
The Matrix Graph Database
Traversing the Graph
Resources & References
• Neo4j website : http://neo4j.org/
• Neo4j learning resources:
  http://neo4j.org/resources/
• Videos about Neo4j: http://video.neo4j.org/
• Neo4j tutorial:
  http://docs.neo4j.org/chunked/snapshot/tuto
  rials.html
• Neo4j Java API documentation:
  http://api.neo4j.org/current/
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An Introduction to NOSQL, Graph Databases and Neo4j

  • 2. Database and DBMS • Database - Organized collection of data • The term database is correctly applied to the data and their supporting data structures. • DBMS - Database Management System: a software package with computer programs that controls the creation, maintenance and use of a database.
  • 3. Types of Happening Databases • Relational database – nothing new but still in use and it seems it will always be a happening one. • Cloud databases – everything is cloudy. • Data warehouse – Huge! Huge! Huge! archives. • Embedded databases – you can’t see them :P • Document oriented database – the In thing. • Hypermedia database – WWW. • Graph database – facebook, twitter, social network.
  • 5. Why NOSQL now? Driving trends
  • 6. Trend 1: Data Size 3000 2011? 2500 2000 1500 2010 1000 500 2009 2007 2008 0
  • 7. Trend 2: Connectedness GGG Onotologies RDFa Folksonomies Information connectivity Tagging Wikis UGC Blogs Feeds Hypertext Text Documents
  • 8. Trend 3: Semi-structured information • Individualisationof content – 1970’s salary lists, all elements exactly one job – 2000’s salary lists, we need many job columns! • Store more data about each entity • Trend accelerated by the decentralization of content generation – Age of participation (“web 2.0”)
  • 9. Trend 4: Architecture 1980’s: Single Application Application DB
  • 10. Trend 4: Architecture 1990’s: Integration Database Antipattern Application Application Application DB
  • 11. Trend 4: Architecture 2000’s: SOA RESTful, hypermedia, composite apps Application Application Application DB DB DB
  • 12. Side note: RDBMS performance Salary list Most Web apps Social Network Location-based services
  • 15. Key-Value Stores • “Dynamo: Amazon’s Highly Available Key- Value Store” (2007) • Data model: – Global key-value mapping – Highly fault tolerant (typically) • Examples: – Riak, Redis, Voldemort
  • 16. Column Family (BigTable) • Google’s “Bigtable: A Distributed Storage System for Structured Data” (2006) • Data model: – A big table, with column families – Map-reduce for querying/processing • Examples: – HBase, HyperTable, Cassandra
  • 17. Document Databases • Data model – Collections of documents – A document is a key-value collection – Index-centric, lots of map-reduce • Examples – CouchDB, MongoDB
  • 18. Graph Databases • Data model: – Nodes with properties – Named relationships with properties – Hypergraph, sometimes • Examples: – Neo4j (of course), SonesGraphDB, OrientDB, InfiniteGraph, AllegroGraph
  • 19. Why Graph Databases? • Schema Less and Efficient storage of Semi Structured Information • No O/R mismatch – very natural to map a graph to an Object Oriented language like Ruby. • Express Queries as Traversals. Fast deep traversal instead of slow SQL queries that span many table joins. • Very natural to express graph related problem with traversals (recommendation engine, find shortest parth etc..) • Seamless integration with various existing programming languages. • ACID Transaction with rollbacks support. • Whiteboard friendly – you use the language of node,properties and relationship to describe your domain (instead of e.g. UML) and there is no need to have a complicated O/R mapping tool to implement it in your database. You can say that Neo4j is “Whiteboard friendly” !(http://video.neo4j.org/JHU6F/live-graph- session-how-allison-knows-james/)
  • 20. Social Network “path exists” Performance • Experiment: • ~1k persons # persons query time • Average 50 friends per Relational 1000 2000ms database person • pathExists(a,b) limited to depth 4
  • 21. Social Network “path exists” Performance • Experiment: • ~1k persons # persons query time • Average 50 friends per Relational 1000 2000ms database person Neo4j 1000 2ms • pathExists(a,b) limited to depth 4
  • 22. Social Network “path exists” Performance • Experiment: • ~1k persons # persons query time • Average 50 friends per Relational 1000 2000ms database person Neo4j 1000 2ms • pathExists(a,b) Neo4j 1000000 2ms limited to depth 4
  • 23. What are graphs good for? • Recommendations • Business intelligence • Social computing • Geospatial • Systems management • Web of things • Genealogy • Time series data • Product catalogue • Web analytics • Scientific computing (especially bioinformatics) • Indexing your slow RDBMS • And much more!
  • 27. Depth First Search ?????????????????
  • 28. Graph Databases • A graph database stores data in a graph, the most generic of data structures, capable of elegantly representing any kind of data in a highly accessible way.
  • 29. Graphs • “A Graph —records data in→ Nodes —which have→ Properties”
  • 30. Graphs • “Nodes —are organized by→ Relationships — which also have→ Properties”
  • 31. Query a graph with Traversal • “A Traversal —navigates→ a Graph; it — identifies→ Paths —which order→ Nodes”
  • 32. Indexes • “An Index —maps from→ Properties —to either→ Nodes or Relationships”
  • 33. Neo4j is a Graph Database • “A Graph Database —manages a→ Graph and —also manages related→ Indexes”
  • 34. Neo4j – Hey! This is why I am a Graph Database. • The fundamental units that form a graph are nodes and relationships. • In Neo4j, both nodes and relationships can contain properties. • Nodes are often used to represent entities, but depending on the domain relationships may be used for that purpose as well.
  • 36. Relationships in Neo4j • Relationships between nodes are a key part of Neo4j.
  • 39. Properties • Both nodes and relationships can have properties. • Properties are key-value pairs where the key is a string. • Property values can be either a primitive or an array of one primitive type. For example String, int and int[] values are valid for properties.
  • 41. Paths in Neo4j • A path is one or more nodes with connecting relationships, typically retrieved as a query or traversal result.
  • 42. Traversals in Neo4j • Traversing a graph means visiting its nodes, following relationships according to some rules. • In most cases only a subgraph is visited, as you already know where in the graph the interesting nodes and relationships are found. • Traversal API • Depth first and Breadth first.
  • 45. Wrap mutating operations in a transaction.
  • 49. The Matrix Graph Database
  • 51. Resources & References • Neo4j website : http://neo4j.org/ • Neo4j learning resources: http://neo4j.org/resources/ • Videos about Neo4j: http://video.neo4j.org/ • Neo4j tutorial: http://docs.neo4j.org/chunked/snapshot/tuto rials.html • Neo4j Java API documentation: http://api.neo4j.org/current/

Editor's Notes

  • #5: Future stores will be mixed – right shape for the right jobPolyglot persistenceFrameworks (e.g. spring data) embracing this already
  • #8: UGC = User Generated ContentGGG = Giant Global Graph (what the web will become)
  • #13: This is strictly about connected data – joins kill performance there.No bashing of RDBMS performance for tabular transaction processingGreen line denotes “zone of SQL adequacy”
  • #15: Fowler points out that KV/Column/Document stores are all aggregates: they’re different from graphs because they enforce structure at design time – as an aggregate of data.Clump of data that can be co-located on a cluster instance and which is accessed together.“a fundamental unit of storage which is a rich structure of closely related data: for key-value stores it's the value, for document stores it's the document, and for column-family stores it's the column family. In DDD terms, this group of data is an aggregate.”
  • #16: History – Amazon decide that they always wanted the shopping basket to be available, but couldn’t take a chance on RDBMSSo they built their ownBig risk, but simple data model and well-known computing science underpinning it (e.g. consistent hashing, Bloom filters for sensible replication)+ Massive read/write scale- Simplistic data model moves heavy lifting into the app tier (e.g. map reduce)
  • #19: People talk about Codd’s relational model being mature because it was proposed in 1969 – 42 years old.Euler’s graph theory was proposed in 1736 – 275 years old.